RNA–Protein interactions for RNA: ENST00000340433.3

RTL4-201, Transcript of retrotransposon Gag like 4, humanhuman

APPRIS P1 BASIC

Gene RTL4, Length 2,613 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4-201ENST00000340433 WIZO95785 1651 aa4.59□□□□□ -1.67
RTL4-201ENST00000340433 SLAIN1Q8ND83 568 aa4.59□□□□□ -1.67
RTL4-201ENST00000340433 SEC24BO95487 1268 aa4.59□□□□□ -1.68
RTL4-201ENST00000340433 PLCB2Q00722 1185 aa4.59□□□□□ -1.68
RTL4-201ENST00000340433 IER5LQ5T953 404 aa4.59□□□□□ -1.68
RTL4-201ENST00000340433 BBXQ8WY36 941 aaPredicted RBP4.59□□□□□ -1.68
RTL4-201ENST00000340433 CHD1O14646 1710 aa4.58□□□□□ -1.68
RTL4-201ENST00000340433 POTEFA5A3E0 1075 aa4.57□□□□□ -1.68
RTL4-201ENST00000340433 VGFO15240 615 aaPredicted RBP4.57□□□□□ -1.68
RTL4-201ENST00000340433 TIE1P35590 1138 aa4.57□□□□□ -1.68
RTL4-201ENST00000340433 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.57□□□□□ -1.68
RTL4-201ENST00000340433 TARBP1Q13395 1621 aaKnown RBP4.57□□□□□ -1.68
RTL4-201ENST00000340433 HS6ST3Q8IZP7 471 aa4.57□□□□□ -1.68
RTL4-201ENST00000340433 TAOK2Q9UL54 1235 aa4.57□□□□□ -1.68
RTL4-201ENST00000340433 PCDHB8Q9UN66 801 aa4.57□□□□□ -1.68
RTL4-201ENST00000340433 PCDHB13Q9Y5F0 798 aa4.57□□□□□ -1.68
RTL4-201ENST00000340433 EIF4G3O43432 1585 aaKnown RBP4.56□□□□□ -1.68
RTL4-201ENST00000340433 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.56□□□□□ -1.68
RTL4-201ENST00000340433 STK25O00506 426 aa4.56□□□□□ -1.68
RTL4-201ENST00000340433 PAXIP1Q6ZW49 1069 aaPredicted RBP4.56□□□□□ -1.68
RTL4-201ENST00000340433 ZFP91Q96JP5 570 aaPredicted RBP4.56□□□□□ -1.68
RTL4-201ENST00000340433 CFAP44Q96MT7 982 aa4.56□□□□□ -1.68
RTL4-201ENST00000340433 TOP2AP11388 1531 aaKnown RBP4.55□□□□□ -1.68
RTL4-201ENST00000340433 MAP3K13O43283 966 aa4.55□□□□□ -1.68
RTL4-201ENST00000340433 HAP1P54257 671 aaPredicted RBP4.55□□□□□ -1.68
RTL4-201ENST00000340433 ZNF467Q7Z7K2 595 aaPredicted RBP4.55□□□□□ -1.68
RTL4-201ENST00000340433 KIF12Q96FN5 646 aa4.54□□□□□ -1.68
RTL4-201ENST00000340433 STK24Q9Y6E0 443 aa4.54□□□□□ -1.68
RTL4-201ENST00000340433 IFNL1Q8IU54 200 aa4.54□□□□□ -1.68
RTL4-201ENST00000340433 BCL11BQ9C0K0 894 aaPredicted RBP4.54□□□□□ -1.68
RTL4-201ENST00000340433 DNMBPQ6XZF7 1577 aa4.53□□□□□ -1.68
RTL4-201ENST00000340433 SGIP1Q9BQI5 828 aa4.53□□□□□ -1.68
RTL4-201ENST00000340433 BMP2KQ9NSY1 1161 aaPredicted RBP4.53□□□□□ -1.68
RTL4-201ENST00000340433 PDAP1Q13442 181 aaKnown RBP4.52□□□□□ -1.69
RTL4-201ENST00000340433 NKX1-1Q15270 411 aaPredicted RBP4.52□□□□□ -1.69
RTL4-201ENST00000340433 SPRYD3Q8NCJ5 442 aa4.52□□□□□ -1.69
RTL4-201ENST00000340433 TOPBP1Q92547 1522 aa4.52□□□□□ -1.69
RTL4-201ENST00000340433 PSEN1P49768 467 aa4.51□□□□□ -1.69
RTL4-201ENST00000340433 ZNF608Q9ULD9 1512 aaPredicted RBP4.51□□□□□ -1.69
RTL4-201ENST00000340433 SYNJ1O43426 1573 aa4.51□□□□□ -1.69
RTL4-201ENST00000340433 KIF13AQ9H1H9 1805 aa4.5□□□□□ -1.69
RTL4-201ENST00000340433 MAGI1Q96QZ7 1491 aaPredicted RBP4.5□□□□□ -1.69
RTL4-201ENST00000340433 SHROOM2Q13796 1616 aa4.49□□□□□ -1.69
RTL4-201ENST00000340433 CCDC88BA6NC98 1476 aa4.49□□□□□ -1.69
RTL4-201ENST00000340433 RNF166Q96A37 237 aaPredicted RBP4.48□□□□□ -1.69
RTL4-201ENST00000340433 COLQQ9Y215 455 aaPredicted RBP4.48□□□□□ -1.69
RTL4-201ENST00000340433 EMP3P54852 163 aa4.48□□□□□ -1.69
RTL4-201ENST00000340433 TRPC6Q9Y210 931 aa4.48□□□□□ -1.69
RTL4-201ENST00000340433 GTPBP6O43824 516 aaPredicted RBP4.47□□□□□ -1.69
RTL4-201ENST00000340433 KRTAP3-3Q9BYR6 98 aa4.47□□□□□ -1.69
RTL4-201ENST00000340433 KRTAP3-2Q9BYR7 98 aa4.47□□□□□ -1.69
RTL4-201ENST00000340433 TSHZ2Q9NRE2 1034 aa4.47□□□□□ -1.69
RTL4-201ENST00000340433 CABP2Q9NPB3 220 aa4.47□□□□□ -1.69
RTL4-201ENST00000340433 TIMELESSQ9UNS1 1208 aa4.47□□□□□ -1.69
RTL4-201ENST00000340433 PTGER2P43116 358 aa4.46□□□□□ -1.69
RTL4-201ENST00000340433 ERCC6L2Q5T890 1561 aa4.46□□□□□ -1.7
RTL4-201ENST00000340433 SYNJ2O15056 1496 aa4.45□□□□□ -1.7
RTL4-201ENST00000340433 EFCAB3Q8N7B9 438 aa4.45□□□□□ -1.7
RTL4-201ENST00000340433 TMEM106CQ9BVX2 250 aa4.45□□□□□ -1.7
RTL4-201ENST00000340433 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.45□□□□□ -1.7
RTL4-201ENST00000340433 PLCG2P16885 1265 aa4.45□□□□□ -1.7
RTL4-201ENST00000340433 MAPKBP1O60336 1514 aa4.45□□□□□ -1.7
RTL4-201ENST00000340433 CYB5RLQ6IPT4 315 aa4.44□□□□□ -1.7
RTL4-201ENST00000340433 HS3ST6Q96QI5 342 aa4.44□□□□□ -1.7
RTL4-201ENST00000340433 VSIG10Q8N0Z9 540 aa4.44□□□□□ -1.7
RTL4-201ENST00000340433 MARVELD3Q96A59 401 aa4.44□□□□□ -1.7
RTL4-201ENST00000340433 MFRPQ9BY79 579 aa4.44□□□□□ -1.7
RTL4-201ENST00000340433 KDM2AQ9Y2K7 1162 aa4.44□□□□□ -1.7
RTL4-201ENST00000340433 POLA1P09884 1462 aaPredicted RBP4.44□□□□□ -1.7
RTL4-201ENST00000340433 GAPVD1Q14C86 1478 aa4.44□□□□□ -1.7
RTL4-201ENST00000340433 TTLL13PA6NNM8 815 aa4.43□□□□□ -1.7
RTL4-201ENST00000340433 PBRM1Q86U86 1689 aa4.43□□□□□ -1.7
RTL4-201ENST00000340433 SUPT5HO00267 1087 aaKnown RBP4.43□□□□□ -1.7
RTL4-201ENST00000340433 GRIN2BQ13224 1484 aa4.43□□□□□ -1.7
RTL4-201ENST00000340433 GOLGA2Q08379 1002 aa4.42□□□□□ -1.7
RTL4-201ENST00000340433 RYDENQ9NUL5 291 aaKnown RBP4.42□□□□□ -1.7
RTL4-201ENST00000340433 PHF8Q9UPP1 1060 aa4.42□□□□□ -1.7
RTL4-201ENST00000340433 ABCA5Q8WWZ7 1642 aa4.42□□□□□ -1.7
RTL4-201ENST00000340433 NUP160Q12769 1436 aa4.42□□□□□ -1.7
RTL4-201ENST00000340433 SOX12O15370 315 aa4.41□□□□□ -1.7
RTL4-201ENST00000340433 AQRO60306 1485 aaKnown RBP eCLIP4.41□□□□□ -1.7
RTL4-201ENST00000340433 SNAPC4Q5SXM2 1469 aa4.41□□□□□ -1.7
RTL4-201ENST00000340433 ABCC10Q5T3U5 1492 aa4.41□□□□□ -1.7
RTL4-201ENST00000340433 FBXO22Q8NEZ5 403 aa4.41□□□□□ -1.7
RTL4-201ENST00000340433 PPP1R37O75864 691 aa4.4□□□□□ -1.7
RTL4-201ENST00000340433 NLRP6P59044 892 aa4.4□□□□□ -1.7
RTL4-201ENST00000340433 MKRN3Q13064 507 aaKnown RBP4.4□□□□□ -1.7
RTL4-201ENST00000340433 DAXXQ9UER7 740 aaPredicted RBP4.4□□□□□ -1.7
RTL4-201ENST00000340433 MYT1LQ9UL68 1186 aa4.4□□□□□ -1.7
RTL4-201ENST00000340433 TRIM35Q9UPQ4 493 aa4.4□□□□□ -1.7
RTL4-201ENST00000340433 DIP2BQ9P265 1576 aa4.4□□□□□ -1.71
RTL4-201ENST00000340433 GLI2P10070 1586 aa4.4□□□□□ -1.71
RTL4-201ENST00000340433 CEP170Q5SW79 1584 aa4.4□□□□□ -1.71
RTL4-201ENST00000340433 TULP1O00294 542 aaPredicted RBP4.4□□□□□ -1.71
RTL4-201ENST00000340433 FAM205CA6NFA0 338 aa4.39□□□□□ -1.71
RTL4-201ENST00000340433 TPRNQ4KMQ1 711 aa4.39□□□□□ -1.71
RTL4-201ENST00000340433 ILDR1Q86SU0 546 aaPredicted RBP4.39□□□□□ -1.71
RTL4-201ENST00000340433 SOGA1O94964 1423 aa4.38□□□□□ -1.71
RTL4-201ENST00000340433 ABCA10Q8WWZ4 1543 aa4.38□□□□□ -1.71
RTL4-201ENST00000340433 MS4A4AQ96JQ5 239 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms