RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 CAMSAP2Q08AD1 1489 aa15.39■□□□□ 0.05
TRAF3IP2-201ENST00000340026 ABCC10Q5T3U5 1492 aa15.39■□□□□ 0.05
TRAF3IP2-201ENST00000340026 SHANK2Q9UPX8 1470 aa15.39■□□□□ 0.05
TRAF3IP2-201ENST00000340026 KIF14Q15058 1648 aa15.39■□□□□ 0.05
TRAF3IP2-201ENST00000340026 TONSLQ96HA7 1378 aa15.39■□□□□ 0.05
TRAF3IP2-201ENST00000340026 PRG4Q92954 1404 aaPredicted RBP15.38■□□□□ 0.05
TRAF3IP2-201ENST00000340026 CDC42BPAQ5VT25 1732 aa15.37■□□□□ 0.05
TRAF3IP2-201ENST00000340026 ATP10BO94823 1461 aa15.36■□□□□ 0.05
TRAF3IP2-201ENST00000340026 CHD1O14646 1710 aa15.35■□□□□ 0.05
TRAF3IP2-201ENST00000340026 ARHGEF5Q12774 1597 aa15.34■□□□□ 0.05
TRAF3IP2-201ENST00000340026 NCOA1Q15788 1441 aa15.33■□□□□ 0.04
TRAF3IP2-201ENST00000340026 RPRD2Q5VT52 1461 aaKnown RBP15.32■□□□□ 0.04
TRAF3IP2-201ENST00000340026 KDM5DQ9BY66 1539 aa15.3■□□□□ 0.04
TRAF3IP2-201ENST00000340026 ANKRD30BQ9BXX2 1392 aa15.3■□□□□ 0.04
TRAF3IP2-201ENST00000340026 RRP7BPQ9NSQ0 103 aa15.3■□□□□ 0.04
TRAF3IP2-201ENST00000340026 MPHOSPH9Q99550 1183 aa15.3■□□□□ 0.04
TRAF3IP2-201ENST00000340026 PREX2Q70Z35 1606 aa15.29■□□□□ 0.04
TRAF3IP2-201ENST00000340026 CFDP1Q9UEE9 299 aaPredicted RBP15.27■□□□□ 0.04
TRAF3IP2-201ENST00000340026 PTPRGP23470 1445 aa15.27■□□□□ 0.04
TRAF3IP2-201ENST00000340026 PZPP20742 1482 aa15.27■□□□□ 0.04
TRAF3IP2-201ENST00000340026 GTF3C3Q9Y5Q9 886 aa15.26■□□□□ 0.03
TRAF3IP2-201ENST00000340026 TEX14Q8IWB6 1497 aa15.26■□□□□ 0.03
TRAF3IP2-201ENST00000340026 PLEKHD1A6NEE1 506 aa15.26■□□□□ 0.03
TRAF3IP2-201ENST00000340026 ANKRD30AQ9BXX3 1397 aa15.26■□□□□ 0.03
TRAF3IP2-201ENST00000340026 CHIC2Q9UKJ5 165 aa15.25■□□□□ 0.03
TRAF3IP2-201ENST00000340026 MAST1Q9Y2H9 1570 aa15.25■□□□□ 0.03
TRAF3IP2-201ENST00000340026 CLASP1Q7Z460 1538 aa15.25■□□□□ 0.03
TRAF3IP2-201ENST00000340026 FBLN2P98095 1184 aa15.24■□□□□ 0.03
TRAF3IP2-201ENST00000340026 ZNF644Q9H582 1327 aaPredicted RBP15.24■□□□□ 0.03
TRAF3IP2-201ENST00000340026 ABCC2Q92887 1545 aa15.23■□□□□ 0.03
TRAF3IP2-201ENST00000340026 CDC42BPBQ9Y5S2 1711 aa15.23■□□□□ 0.03
TRAF3IP2-201ENST00000340026 UHRF1BP1LA0JNW5 1464 aa15.22■□□□□ 0.03
TRAF3IP2-201ENST00000340026 CCER2I3L3R5 266 aa15.22■□□□□ 0.03
TRAF3IP2-201ENST00000340026 MBD5Q9P267 1494 aa15.22■□□□□ 0.03
TRAF3IP2-201ENST00000340026 POLR1AO95602 1720 aaPredicted RBP15.22■□□□□ 0.03
TRAF3IP2-201ENST00000340026 RSPH4AQ5TD94 716 aa15.21■□□□□ 0.03
TRAF3IP2-201ENST00000340026 KIAA1107Q9UPP5 1409 aa15.21■□□□□ 0.02
TRAF3IP2-201ENST00000340026 C9orf84Q5VXU9 1444 aa15.2■□□□□ 0.02
TRAF3IP2-201ENST00000340026 TRIM52Q96A61 297 aa15.2■□□□□ 0.02
TRAF3IP2-201ENST00000340026 ARID3CA6NKF2 412 aa15.19■□□□□ 0.02
TRAF3IP2-201ENST00000340026 SAMD9LQ8IVG5 1584 aa15.19■□□□□ 0.02
TRAF3IP2-201ENST00000340026 ANKRD50Q9ULJ7 1429 aa15.19■□□□□ 0.02
TRAF3IP2-201ENST00000340026 CCDC141Q6ZP82 1450 aa15.18■□□□□ 0.02
TRAF3IP2-201ENST00000340026 PELP1Q8IZL8 1130 aaKnown RBP15.18■□□□□ 0.02
TRAF3IP2-201ENST00000340026 YTHDC1Q96MU7 727 aaKnown RBP15.18■□□□□ 0.02
TRAF3IP2-201ENST00000340026 PLEKHH2Q8IVE3 1493 aa15.17■□□□□ 0.02
TRAF3IP2-201ENST00000340026 PLXNC1O60486 1568 aa15.16■□□□□ 0.02
TRAF3IP2-201ENST00000340026 MYO5CQ9NQX4 1742 aa15.16■□□□□ 0.02
TRAF3IP2-201ENST00000340026 ARHGEF12Q9NZN5 1544 aa15.15■□□□□ 0.02
TRAF3IP2-201ENST00000340026 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.14■□□□□ 0.01
TRAF3IP2-201ENST00000340026 DDX10Q13206 875 aaKnown RBP15.14■□□□□ 0.01
TRAF3IP2-201ENST00000340026 ARAP3Q8WWN8 1544 aa15.14■□□□□ 0.01
TRAF3IP2-201ENST00000340026 SPATA31E1Q6ZUB1 1445 aa15.14■□□□□ 0.01
TRAF3IP2-201ENST00000340026 UNC13BO14795 1591 aa15.13■□□□□ 0.01
TRAF3IP2-201ENST00000340026 SLC4A1APQ9BWU0 796 aaKnown RBP15.13■□□□□ 0.01
TRAF3IP2-201ENST00000340026 UHRF1BP1Q6BDS2 1440 aa15.13■□□□□ 0.01
TRAF3IP2-201ENST00000340026 TTC37Q6PGP7 1564 aa15.13■□□□□ 0.01
TRAF3IP2-201ENST00000340026 L3MBTL2Q969R5 705 aa15.13■□□□□ 0.01
TRAF3IP2-201ENST00000340026 EIF4G2P78344 907 aaKnown RBP eCLIP15.11■□□□□ 0.01
TRAF3IP2-201ENST00000340026 ERCC6L2Q5T890 1561 aa15.1■□□□□ 0.01
TRAF3IP2-201ENST00000340026 ZCCHC11Q5TAX3 1644 aaKnown RBP15.09■□□□□ 0.01
TRAF3IP2-201ENST00000340026 ANP32CO43423 234 aa15.09■□□□□ 0.01
TRAF3IP2-201ENST00000340026 TSPY4P0CV99 314 aa15.08■□□□□ 0.01
TRAF3IP2-201ENST00000340026 TSPY10P0CW01 314 aa15.08■□□□□ 0.01
TRAF3IP2-201ENST00000340026 KIF15Q9NS87 1388 aa15.08■□□□□ 0
TRAF3IP2-201ENST00000340026 MAGI2Q86UL8 1455 aa15.08■□□□□ 0
TRAF3IP2-201ENST00000340026 HSPA5P11021 654 aaKnown RBP15.07■□□□□ 0
TRAF3IP2-201ENST00000340026 CNTLNQ9NXG0 1405 aa15.06■□□□□ 0
TRAF3IP2-201ENST00000340026 SYCP2Q9BX26 1530 aa15.06■□□□□ 0
TRAF3IP2-201ENST00000340026 IQGAP3Q86VI3 1631 aa15.05■□□□□ 0
TRAF3IP2-201ENST00000340026 PLCH2O75038 1416 aa15.05■□□□□ 0
TRAF3IP2-201ENST00000340026 WASHC2AQ641Q2 1341 aa15.05■□□□□ 0
TRAF3IP2-201ENST00000340026 ARHGAP5Q13017 1502 aa15.05■□□□□ -0
TRAF3IP2-201ENST00000340026 RALGAPBQ86X10 1494 aa15.05■□□□□ -0
TRAF3IP2-201ENST00000340026 ZNF777Q9ULD5 760 aaPredicted RBP15.05■□□□□ -0
TRAF3IP2-201ENST00000340026 ARID4BQ4LE39 1312 aaPredicted RBP15.04■□□□□ -0
TRAF3IP2-201ENST00000340026 FAM135AQ9P2D6 1515 aa15.04■□□□□ -0
TRAF3IP2-201ENST00000340026 DUOX2Q9NRD8 1548 aa15.04■□□□□ -0
TRAF3IP2-201ENST00000340026 ATP10AO60312 1499 aa15.03■□□□□ -0
TRAF3IP2-201ENST00000340026 CCDC7Q96M83 1385 aa15.03■□□□□ -0
TRAF3IP2-201ENST00000340026 ABCC1P33527 1531 aa15.03■□□□□ -0
TRAF3IP2-201ENST00000340026 KDM5CP41229 1560 aa15.03■□□□□ -0
TRAF3IP2-201ENST00000340026 ERBINQ96RT1 1412 aa15.03■□□□□ -0
TRAF3IP2-201ENST00000340026 FOXD1Q16676 465 aa15.02■□□□□ -0
TRAF3IP2-201ENST00000340026 NUP155O75694 1391 aa15.02■□□□□ -0
TRAF3IP2-201ENST00000340026 NBPF8Q3BBV2 869 aa15.02□□□□□ -0.01
TRAF3IP2-201ENST00000340026 PKD2Q13563 968 aa15.02□□□□□ -0.01
TRAF3IP2-201ENST00000340026 RTEL1-TNFRSF6BF6WH68 1400 aa14.99□□□□□ -0.01
TRAF3IP2-201ENST00000340026 LAMC1P11047 1609 aa14.99□□□□□ -0.01
TRAF3IP2-201ENST00000340026 HIRIP3Q9BW71 556 aaPredicted RBP14.99□□□□□ -0.01
TRAF3IP2-201ENST00000340026 HNRNPMP52272 730 aaKnown RBP eCLIP14.98□□□□□ -0.01
TRAF3IP2-201ENST00000340026 SLC24A1O60721 1099 aa14.97□□□□□ -0.01
TRAF3IP2-201ENST00000340026 KCNH8Q96L42 1107 aa14.97□□□□□ -0.01
TRAF3IP2-201ENST00000340026 ABCA9Q8IUA7 1624 aa14.96□□□□□ -0.02
TRAF3IP2-201ENST00000340026 WDR7Q9Y4E6 1490 aa14.96□□□□□ -0.02
TRAF3IP2-201ENST00000340026 DEPDC5O75140 1603 aa14.94□□□□□ -0.02
TRAF3IP2-201ENST00000340026 BCORL1Q5H9F3 1711 aa14.93□□□□□ -0.02
TRAF3IP2-201ENST00000340026 TRPM1Q7Z4N2 1603 aa14.92□□□□□ -0.02
TRAF3IP2-201ENST00000340026 ROCK2O75116 1388 aaKnown RBP14.92□□□□□ -0.02
TRAF3IP2-201ENST00000340026 USP47Q96K76 1375 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms