RNA–Protein interactions for RNA: ENST00000338758.11

PARVB-201, Transcript of parvin beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PARVB, Length 5,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-201ENST00000338758 UPF2Q9HAU5 1272 aaKnown RBP18.73■□□□□ 0.59
PARVB-201ENST00000338758 U2SURPO15042 1029 aaKnown RBP18.72■□□□□ 0.59
PARVB-201ENST00000338758 MAPK8IP3Q9UPT6 1336 aa18.72■□□□□ 0.59
PARVB-201ENST00000338758 L3MBTL2Q969R5 705 aa18.72■□□□□ 0.59
PARVB-201ENST00000338758 CC2D2AQ9P2K1 1620 aa18.7■□□□□ 0.58
PARVB-201ENST00000338758 HSP90AA1P07900 732 aaKnown RBP18.69■□□□□ 0.58
PARVB-201ENST00000338758 LAS1LQ9Y4W2 734 aaKnown RBP18.69■□□□□ 0.58
PARVB-201ENST00000338758 NUTM2DQ5VT03 806 aaPredicted RBP18.68■□□□□ 0.58
PARVB-201ENST00000338758 MYH16Q9H6N6 1097 aa18.67■□□□□ 0.58
PARVB-201ENST00000338758 DNAJC5BQ9UF47 199 aa18.67■□□□□ 0.58
PARVB-201ENST00000338758 ROCK2O75116 1388 aaKnown RBP18.66■□□□□ 0.58
PARVB-201ENST00000338758 MORC1Q86VD1 984 aa18.65■□□□□ 0.58
PARVB-201ENST00000338758 ARXQ96QS3 562 aa18.64■□□□□ 0.57
PARVB-201ENST00000338758 SUPT16HQ9Y5B9 1047 aaKnown RBP18.64■□□□□ 0.57
PARVB-201ENST00000338758 GRIN2BQ13224 1484 aa18.63■□□□□ 0.57
PARVB-201ENST00000338758 ZNF644Q9H582 1327 aaPredicted RBP18.61■□□□□ 0.57
PARVB-201ENST00000338758 FAM69CQ0P6D2 419 aa18.59■□□□□ 0.57
PARVB-201ENST00000338758 HMGXB3Q12766 1538 aa18.58■□□□□ 0.56
PARVB-201ENST00000338758 HDGFL2Q7Z4V5 671 aaPredicted RBP18.58■□□□□ 0.56
PARVB-201ENST00000338758 MRC2Q9UBG0 1479 aa18.57■□□□□ 0.56
PARVB-201ENST00000338758 EID1Q9Y6B2 187 aa18.56■□□□□ 0.56
PARVB-201ENST00000338758 FTSJ3Q8IY81 847 aaKnown RBP18.56■□□□□ 0.56
PARVB-201ENST00000338758 SYNJ1O43426 1573 aa18.55■□□□□ 0.56
PARVB-201ENST00000338758 FRAT1Q92837 279 aaPredicted RBP18.55■□□□□ 0.56
PARVB-201ENST00000338758 PAK3O75914 559 aaPredicted RBP18.55■□□□□ 0.56
PARVB-201ENST00000338758 TOPBP1Q92547 1522 aa18.55■□□□□ 0.56
PARVB-201ENST00000338758 TRAK1Q9UPV9 953 aa18.52■□□□□ 0.56
PARVB-201ENST00000338758 POLA1P09884 1462 aaPredicted RBP18.52■□□□□ 0.56
PARVB-201ENST00000338758 BICRAQ9NZM4 1560 aa18.52■□□□□ 0.56
PARVB-201ENST00000338758 PNNQ9H307 717 aaKnown RBP18.51■□□□□ 0.55
PARVB-201ENST00000338758 CCDC144AA2RUR9 1427 aa18.51■□□□□ 0.55
PARVB-201ENST00000338758 DHX57Q6P158 1386 aaKnown RBP18.51■□□□□ 0.55
PARVB-201ENST00000338758 KTN1Q86UP2 1357 aaKnown RBP18.5■□□□□ 0.55
PARVB-201ENST00000338758 NUTM2FA1L443 756 aa18.5■□□□□ 0.55
PARVB-201ENST00000338758 MYOM3Q5VTT5 1437 aa18.49■□□□□ 0.55
PARVB-201ENST00000338758 PRG4Q92954 1404 aaPredicted RBP18.49■□□□□ 0.55
PARVB-201ENST00000338758 IFT140Q96RY7 1462 aa18.49■□□□□ 0.55
PARVB-201ENST00000338758 CCER2I3L3R5 266 aa18.48■□□□□ 0.55
PARVB-201ENST00000338758 KIF21BO75037 1637 aa18.48■□□□□ 0.55
PARVB-201ENST00000338758 PHLDB1Q86UU1 1377 aa18.47■□□□□ 0.55
PARVB-201ENST00000338758 CUX1P39880 1505 aa18.47■□□□□ 0.55
PARVB-201ENST00000338758 ST20-MTHFSA0A0A6YYL1 179 aa18.47■□□□□ 0.55
PARVB-201ENST00000338758 FGD6Q6ZV73 1430 aa18.46■□□□□ 0.55
PARVB-201ENST00000338758 U2AF1L5P0DN76 240 aaPredicted RBP18.46■□□□□ 0.55
PARVB-201ENST00000338758 U2AF1Q01081 240 aaKnown RBP eCLIP18.46■□□□□ 0.55
PARVB-201ENST00000338758 EIF3AQ14152 1382 aaKnown RBP18.46■□□□□ 0.55
PARVB-201ENST00000338758 AFAP1Q8N556 730 aa18.45■□□□□ 0.54
PARVB-201ENST00000338758 TERF2IPQ9NYB0 399 aa18.43■□□□□ 0.54
PARVB-201ENST00000338758 ARAP1Q96P48 1450 aa18.43■□□□□ 0.54
PARVB-201ENST00000338758 KIF15Q9NS87 1388 aa18.43■□□□□ 0.54
PARVB-201ENST00000338758 VGFO15240 615 aaPredicted RBP18.43■□□□□ 0.54
PARVB-201ENST00000338758 CASKIN1Q8WXD9 1431 aa18.43■□□□□ 0.54
PARVB-201ENST00000338758 NGDNQ8NEJ9 315 aaKnown RBP18.42■□□□□ 0.54
PARVB-201ENST00000338758 RALBP1Q15311 655 aa18.41■□□□□ 0.54
PARVB-201ENST00000338758 LRRC9Q6ZRR7 1453 aa18.41■□□□□ 0.54
PARVB-201ENST00000338758 PRXQ9BXM0 1461 aa18.41■□□□□ 0.54
PARVB-201ENST00000338758 PRDM2Q13029 1718 aa18.39■□□□□ 0.53
PARVB-201ENST00000338758 RTF1Q92541 710 aaKnown RBP18.39■□□□□ 0.53
PARVB-201ENST00000338758 SNAPC4Q5SXM2 1469 aa18.38■□□□□ 0.53
PARVB-201ENST00000338758 TOP2BQ02880 1626 aa18.38■□□□□ 0.53
PARVB-201ENST00000338758 CSB-PGBD3P0DP91 1061 aa18.38■□□□□ 0.53
PARVB-201ENST00000338758 ERICH3Q5RHP9 1530 aa18.38■□□□□ 0.53
PARVB-201ENST00000338758 NCOA2Q15596 1464 aa18.37■□□□□ 0.53
PARVB-201ENST00000338758 RGS3P49796 1198 aa18.36■□□□□ 0.53
PARVB-201ENST00000338758 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.36■□□□□ 0.53
PARVB-201ENST00000338758 SYNJ2O15056 1496 aa18.36■□□□□ 0.53
PARVB-201ENST00000338758 MS4A1P11836 297 aa18.34■□□□□ 0.53
PARVB-201ENST00000338758 PPP4R2Q9NY27 417 aa18.34■□□□□ 0.53
PARVB-201ENST00000338758 ANKRD50Q9ULJ7 1429 aa18.33■□□□□ 0.53
PARVB-201ENST00000338758 NPHP1O15259 732 aa18.33■□□□□ 0.53
PARVB-201ENST00000338758 DNMBPQ6XZF7 1577 aa18.33■□□□□ 0.52
PARVB-201ENST00000338758 UACAQ9BZF9 1416 aa18.33■□□□□ 0.52
PARVB-201ENST00000338758 B4GALNT3Q6L9W6 998 aa18.32■□□□□ 0.52
PARVB-201ENST00000338758 NLRP13Q86W25 1043 aa18.32■□□□□ 0.52
PARVB-201ENST00000338758 PANK3Q9H999 370 aa18.31■□□□□ 0.52
PARVB-201ENST00000338758 MINK1Q8N4C8 1332 aaPredicted RBP18.31■□□□□ 0.52
PARVB-201ENST00000338758 FYCO1Q9BQS8 1478 aa18.31■□□□□ 0.52
PARVB-201ENST00000338758 CHMP4BQ9H444 224 aaKnown RBP18.31■□□□□ 0.52
PARVB-201ENST00000338758 OS9Q13438 667 aaPredicted RBP18.28■□□□□ 0.52
PARVB-201ENST00000338758 LTV1Q96GA3 475 aaPredicted RBP18.28■□□□□ 0.52
PARVB-201ENST00000338758 USP47Q96K76 1375 aa18.27■□□□□ 0.52
PARVB-201ENST00000338758 AMPHP49418 695 aa18.27■□□□□ 0.52
PARVB-201ENST00000338758 NBR1Q14596 966 aa18.27■□□□□ 0.51
PARVB-201ENST00000338758 ARHGAP5Q13017 1502 aa18.26■□□□□ 0.51
PARVB-201ENST00000338758 ANP32BQ92688 251 aaKnown RBP18.26■□□□□ 0.51
PARVB-201ENST00000338758 CCDC146Q8IYE0 955 aa18.25■□□□□ 0.51
PARVB-201ENST00000338758 EVC2Q86UK5 1308 aa18.25■□□□□ 0.51
PARVB-201ENST00000338758 LAMC3Q9Y6N6 1575 aa18.24■□□□□ 0.51
PARVB-201ENST00000338758 ABCA10Q8WWZ4 1543 aa18.23■□□□□ 0.51
PARVB-201ENST00000338758 CALD1Q05682 793 aaKnown RBP18.22■□□□□ 0.51
PARVB-201ENST00000338758 BECN1Q14457 450 aa18.22■□□□□ 0.51
PARVB-201ENST00000338758 CCDC9Q9Y3X0 531 aaKnown RBP18.22■□□□□ 0.51
PARVB-201ENST00000338758 TROQ12816 1431 aaPredicted RBP18.22■□□□□ 0.51
PARVB-201ENST00000338758 KIAA0586Q9BVV6 1533 aa18.22■□□□□ 0.51
PARVB-201ENST00000338758 CASC1Q6TDU7 716 aa18.21■□□□□ 0.51
PARVB-201ENST00000338758 EFCAB5A4FU69 1503 aa18.21■□□□□ 0.51
PARVB-201ENST00000338758 RCAN3Q9UKA8 241 aa18.21■□□□□ 0.51
PARVB-201ENST00000338758 ZNF330Q9Y3S2 320 aaPredicted RBP18.21■□□□□ 0.51
PARVB-201ENST00000338758 RAPGEF3O95398 923 aa18.2■□□□□ 0.5
PARVB-201ENST00000338758 IPO8O15397 1037 aaKnown RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms