RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 TPRNQ4KMQ1 711 aa17.14■□□□□ 0.33
COL2A1-201ENST00000337299 TNNT2P45379 298 aaPredicted RBP17.13■□□□□ 0.33
COL2A1-201ENST00000337299 RAPGEF2Q9Y4G8 1499 aa17.13■□□□□ 0.33
COL2A1-201ENST00000337299 NEUROD2Q15784 382 aa17.13■□□□□ 0.33
COL2A1-201ENST00000337299 PLPPR3Q6T4P5 718 aa17.13■□□□□ 0.33
COL2A1-201ENST00000337299 RGL3Q3MIN7 710 aa17.12■□□□□ 0.33
COL2A1-201ENST00000337299 GOLGA6L3A6NEY3 463 aa17.11■□□□□ 0.33
COL2A1-201ENST00000337299 PTMAP06454 111 aaKnown RBP17.11■□□□□ 0.33
COL2A1-201ENST00000337299 CCDC184Q52MB2 194 aa17.09■□□□□ 0.33
COL2A1-201ENST00000337299 GOLGA6L22H0YM25 854 aa17.09■□□□□ 0.33
COL2A1-201ENST00000337299 L3MBTL2Q969R5 705 aa17.07■□□□□ 0.32
COL2A1-201ENST00000337299 MSNP26038 577 aaKnown RBP17.06■□□□□ 0.32
COL2A1-201ENST00000337299 FRAT2O75474 233 aaPredicted RBP17.05■□□□□ 0.32
COL2A1-201ENST00000337299 EIF4G1Q04637 1599 aaKnown RBP17.05■□□□□ 0.32
COL2A1-201ENST00000337299 RRP1P56182 461 aaKnown RBP17.04■□□□□ 0.32
COL2A1-201ENST00000337299 A0A0U1RQG5 324 aaPredicted RBP17.04■□□□□ 0.32
COL2A1-201ENST00000337299 UBE2Q2Q8WVN8 375 aa17.04■□□□□ 0.32
COL2A1-201ENST00000337299 MYH16Q9H6N6 1097 aa17.04■□□□□ 0.32
COL2A1-201ENST00000337299 HSP90AB1P08238 724 aaKnown RBP17.02■□□□□ 0.32
COL2A1-201ENST00000337299 PDS5BQ9NTI5 1447 aa17.02■□□□□ 0.32
COL2A1-201ENST00000337299 CRBNQ96SW2 442 aa17.01■□□□□ 0.31
COL2A1-201ENST00000337299 AKNAQ7Z591 1439 aa17.01■□□□□ 0.31
COL2A1-201ENST00000337299 PLCB2Q00722 1185 aa16.99■□□□□ 0.31
COL2A1-201ENST00000337299 HSCBQ8IWL3 235 aa16.98■□□□□ 0.31
COL2A1-201ENST00000337299 DNAJC5BQ9UF47 199 aa16.98■□□□□ 0.31
COL2A1-201ENST00000337299 FHAD1B1AJZ9 1412 aa16.97■□□□□ 0.31
COL2A1-201ENST00000337299 FAM161AQ3B820 660 aa16.97■□□□□ 0.31
COL2A1-201ENST00000337299 WASHC2AQ641Q2 1341 aa16.97■□□□□ 0.31
COL2A1-201ENST00000337299 SKAP1Q86WV1 359 aa16.96■□□□□ 0.31
COL2A1-201ENST00000337299 FHOD3Q2V2M9 1422 aa16.96■□□□□ 0.31
COL2A1-201ENST00000337299 KNSTRNQ9Y448 316 aa16.96■□□□□ 0.31
COL2A1-201ENST00000337299 SLC24A1O60721 1099 aa16.95■□□□□ 0.3
COL2A1-201ENST00000337299 MS4A1P11836 297 aa16.95■□□□□ 0.3
COL2A1-201ENST00000337299 FTSJ3Q8IY81 847 aaKnown RBP16.94■□□□□ 0.3
COL2A1-201ENST00000337299 FOXD4L1Q9NU39 408 aa16.94■□□□□ 0.3
COL2A1-201ENST00000337299 STAG3Q9UJ98 1225 aa16.94■□□□□ 0.3
COL2A1-201ENST00000337299 CDK11BP21127 795 aaKnown RBP16.94■□□□□ 0.3
COL2A1-201ENST00000337299 MPHOSPH9Q99550 1183 aa16.93■□□□□ 0.3
COL2A1-201ENST00000337299 FANCD2Q9BXW9 1451 aa16.92■□□□□ 0.3
COL2A1-201ENST00000337299 MFAP1P55081 439 aaKnown RBP16.92■□□□□ 0.3
COL2A1-201ENST00000337299 IGF1RP08069 1367 aa16.91■□□□□ 0.3
COL2A1-201ENST00000337299 DCAF11Q8TEB1 546 aa16.91■□□□□ 0.3
COL2A1-201ENST00000337299 BACH2Q9BYV9 841 aa16.91■□□□□ 0.3
COL2A1-201ENST00000337299 FAM43AQ8N2R8 423 aa16.9■□□□□ 0.3
COL2A1-201ENST00000337299 ESF1Q9H501 851 aaKnown RBP16.9■□□□□ 0.3
COL2A1-201ENST00000337299 FAM13BQ9NYF5 915 aa16.9■□□□□ 0.3
COL2A1-201ENST00000337299 PODXL2Q9NZ53 605 aa16.9■□□□□ 0.3
COL2A1-201ENST00000337299 RAD54L2Q9Y4B4 1467 aa16.88■□□□□ 0.29
COL2A1-201ENST00000337299 NCAPD3P42695 1498 aa16.87■□□□□ 0.29
COL2A1-201ENST00000337299 ARHGAP35Q9NRY4 1499 aa16.87■□□□□ 0.29
COL2A1-201ENST00000337299 WDR97A6NE52 1622 aa16.87■□□□□ 0.29
COL2A1-201ENST00000337299 CLUAP1Q96AJ1 413 aa16.86■□□□□ 0.29
COL2A1-201ENST00000337299 CENPQQ7L2Z9 268 aaPredicted RBP16.85■□□□□ 0.29
COL2A1-201ENST00000337299 JPH4Q96JJ6 628 aa16.84■□□□□ 0.29
COL2A1-201ENST00000337299 CDCA7LQ96GN5 454 aa16.84■□□□□ 0.29
COL2A1-201ENST00000337299 KTN1Q86UP2 1357 aaKnown RBP16.84■□□□□ 0.29
COL2A1-201ENST00000337299 GBP4Q96PP9 640 aa16.83■□□□□ 0.29
COL2A1-201ENST00000337299 NLRP13Q86W25 1043 aa16.83■□□□□ 0.28
COL2A1-201ENST00000337299 RALBP1Q15311 655 aa16.83■□□□□ 0.28
COL2A1-201ENST00000337299 CCDC146Q8IYE0 955 aa16.83■□□□□ 0.28
COL2A1-201ENST00000337299 ZMYND15Q9H091 742 aa16.83■□□□□ 0.28
COL2A1-201ENST00000337299 PDE3BQ13370 1112 aa16.82■□□□□ 0.28
COL2A1-201ENST00000337299 POGKQ9P215 609 aa16.82■□□□□ 0.28
COL2A1-201ENST00000337299 KIF7Q2M1P5 1343 aa16.81■□□□□ 0.28
COL2A1-201ENST00000337299 CCDC7Q96M83 1385 aa16.81■□□□□ 0.28
COL2A1-201ENST00000337299 FGD5Q6ZNL6 1462 aa16.8■□□□□ 0.28
COL2A1-201ENST00000337299 RBM10P98175 930 aaKnown RBP16.79■□□□□ 0.28
COL2A1-201ENST00000337299 PKD2Q13563 968 aa16.79■□□□□ 0.28
COL2A1-201ENST00000337299 GOLGA2Q08379 1002 aa16.78■□□□□ 0.28
COL2A1-201ENST00000337299 FMN1Q68DA7 1419 aa16.78■□□□□ 0.28
COL2A1-201ENST00000337299 CNTLNQ9NXG0 1405 aa16.78■□□□□ 0.28
COL2A1-201ENST00000337299 NESP48681 1621 aa16.78■□□□□ 0.28
COL2A1-201ENST00000337299 ST20-MTHFSA0A0A6YYL1 179 aa16.77■□□□□ 0.28
COL2A1-201ENST00000337299 MYBBP1AQ9BQG0 1328 aaKnown RBP16.76■□□□□ 0.27
COL2A1-201ENST00000337299 KIF21BO75037 1637 aa16.75■□□□□ 0.27
COL2A1-201ENST00000337299 BCL2L13Q9BXK5 485 aa16.75■□□□□ 0.27
COL2A1-201ENST00000337299 COG6Q9Y2V7 657 aa16.75■□□□□ 0.27
COL2A1-201ENST00000337299 HNRNPMP52272 730 aaKnown RBP eCLIP16.74■□□□□ 0.27
COL2A1-201ENST00000337299 PHLDB1Q86UU1 1377 aa16.73■□□□□ 0.27
COL2A1-201ENST00000337299 DDX49Q9Y6V7 483 aaKnown RBP16.72■□□□□ 0.27
COL2A1-201ENST00000337299 CCDC18Q5T9S5 1454 aa16.72■□□□□ 0.27
COL2A1-201ENST00000337299 AQRO60306 1485 aaKnown RBP eCLIP16.71■□□□□ 0.27
COL2A1-201ENST00000337299 R3HCC1Q9Y3T6 440 aaKnown RBP16.71■□□□□ 0.27
COL2A1-201ENST00000337299 TMF1P82094 1093 aa16.71■□□□□ 0.27
COL2A1-201ENST00000337299 CALD1Q05682 793 aaKnown RBP16.71■□□□□ 0.27
COL2A1-201ENST00000337299 FOXD4L5Q5VV16 416 aaPredicted RBP16.71■□□□□ 0.27
COL2A1-201ENST00000337299 FOXD4L4Q8WXT5 416 aaPredicted RBP16.71■□□□□ 0.27
COL2A1-201ENST00000337299 SYNJ1O43426 1573 aa16.71■□□□□ 0.26
COL2A1-201ENST00000337299 RWDD1Q9H446 243 aaPredicted RBP16.7■□□□□ 0.26
COL2A1-201ENST00000337299 DDX11L8A8MPP1 907 aa16.7■□□□□ 0.26
COL2A1-201ENST00000337299 CHAF1AQ13111 956 aaPredicted RBP16.69■□□□□ 0.26
COL2A1-201ENST00000337299 TRAK2O60296 914 aa16.69■□□□□ 0.26
COL2A1-201ENST00000337299 KIF15Q9NS87 1388 aa16.69■□□□□ 0.26
COL2A1-201ENST00000337299 RRP9O43818 475 aaKnown RBP16.69■□□□□ 0.26
COL2A1-201ENST00000337299 BICRAQ9NZM4 1560 aa16.68■□□□□ 0.26
COL2A1-201ENST00000337299 CFTRP13569 1480 aa16.68■□□□□ 0.26
COL2A1-201ENST00000337299 KIAA2012Q0VF49 1180 aa16.67■□□□□ 0.26
COL2A1-201ENST00000337299 C11orf95C9JLR9 678 aaPredicted RBP16.67■□□□□ 0.26
COL2A1-201ENST00000337299 APBB1O00213 710 aa16.67■□□□□ 0.26
COL2A1-201ENST00000337299 MRE11P49959 708 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms