RNA–Protein interactions for RNA: ENST00000336119.7

NLRP3-201, Transcript of NLR family pyrin domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRP3, Length 4,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-201ENST00000336119 EIF4G3O43432 1585 aaKnown RBP12.55□□□□□ -0.4
NLRP3-201ENST00000336119 NUP155O75694 1391 aa12.55□□□□□ -0.4
NLRP3-201ENST00000336119 SUPT6HQ7KZ85 1726 aaKnown RBP12.55□□□□□ -0.4
NLRP3-201ENST00000336119 HECW1Q76N89 1606 aa12.55□□□□□ -0.4
NLRP3-201ENST00000336119 RSPH4AQ5TD94 716 aa12.55□□□□□ -0.4
NLRP3-201ENST00000336119 PTPRGP23470 1445 aa12.55□□□□□ -0.4
NLRP3-201ENST00000336119 IQGAP2Q13576 1575 aa12.54□□□□□ -0.4
NLRP3-201ENST00000336119 KIAA0586Q9BVV6 1533 aa12.53□□□□□ -0.4
NLRP3-201ENST00000336119 GRIN2AQ12879 1464 aa12.53□□□□□ -0.4
NLRP3-201ENST00000336119 PRG4Q92954 1404 aaPredicted RBP12.53□□□□□ -0.4
NLRP3-201ENST00000336119 ZNF644Q9H582 1327 aaPredicted RBP12.53□□□□□ -0.4
NLRP3-201ENST00000336119 EPRSP07814 1512 aaKnown RBP12.52□□□□□ -0.4
NLRP3-201ENST00000336119 DCAF11Q8TEB1 546 aa12.52□□□□□ -0.41
NLRP3-201ENST00000336119 NAIPQ13075 1403 aa12.52□□□□□ -0.41
NLRP3-201ENST00000336119 HNRNPMP52272 730 aaKnown RBP eCLIP12.51□□□□□ -0.41
NLRP3-201ENST00000336119 IRX6P78412 446 aaPredicted RBP12.48□□□□□ -0.41
NLRP3-201ENST00000336119 WDR97A6NE52 1622 aa12.48□□□□□ -0.41
NLRP3-201ENST00000336119 CTTNBP2Q8WZ74 1663 aa12.48□□□□□ -0.41
NLRP3-201ENST00000336119 EFCAB2Q5VUJ9 269 aa12.47□□□□□ -0.41
NLRP3-201ENST00000336119 TARBP1Q13395 1621 aaKnown RBP12.47□□□□□ -0.41
NLRP3-201ENST00000336119 CHGAP10645 457 aaKnown RBP12.47□□□□□ -0.41
NLRP3-201ENST00000336119 TROQ12816 1431 aaPredicted RBP12.47□□□□□ -0.41
NLRP3-201ENST00000336119 CDK13Q14004 1512 aaKnown RBP12.47□□□□□ -0.41
NLRP3-201ENST00000336119 CFAP43Q8NDM7 1665 aa12.46□□□□□ -0.41
NLRP3-201ENST00000336119 PTPN23Q9H3S7 1636 aa12.46□□□□□ -0.42
NLRP3-201ENST00000336119 MAPKBP1O60336 1514 aa12.44□□□□□ -0.42
NLRP3-201ENST00000336119 SALL2Q9Y467 1007 aaPredicted RBP12.44□□□□□ -0.42
NLRP3-201ENST00000336119 ROCK1Q13464 1354 aa12.43□□□□□ -0.42
NLRP3-201ENST00000336119 DAPK1P53355 1430 aa12.43□□□□□ -0.42
NLRP3-201ENST00000336119 CDCA8Q53HL2 280 aa12.43□□□□□ -0.42
NLRP3-201ENST00000336119 FAM69CQ0P6D2 419 aa12.42□□□□□ -0.42
NLRP3-201ENST00000336119 CCDC136Q96JN2 1154 aa12.41□□□□□ -0.42
NLRP3-201ENST00000336119 ANKRD50Q9ULJ7 1429 aa12.41□□□□□ -0.42
NLRP3-201ENST00000336119 DAXXQ9UER7 740 aaPredicted RBP12.41□□□□□ -0.42
NLRP3-201ENST00000336119 PRKRIP1Q9H875 184 aaPredicted RBP12.4□□□□□ -0.42
NLRP3-201ENST00000336119 PPP4R2Q9NY27 417 aa12.4□□□□□ -0.42
NLRP3-201ENST00000336119 PTPRKQ15262 1439 aa12.4□□□□□ -0.42
NLRP3-201ENST00000336119 ABCA5Q8WWZ7 1642 aa12.39□□□□□ -0.43
NLRP3-201ENST00000336119 WDR43Q15061 677 aaKnown RBP eCLIP12.39□□□□□ -0.43
NLRP3-201ENST00000336119 ROCK2O75116 1388 aaKnown RBP12.39□□□□□ -0.43
NLRP3-201ENST00000336119 WASHC2AQ641Q2 1341 aa12.39□□□□□ -0.43
NLRP3-201ENST00000336119 UGGT2Q9NYU1 1516 aa12.39□□□□□ -0.43
NLRP3-201ENST00000336119 TMF1P82094 1093 aa12.39□□□□□ -0.43
NLRP3-201ENST00000336119 CCDC7Q96M83 1385 aa12.39□□□□□ -0.43
NLRP3-201ENST00000336119 ERICH6BQ5W0A0 696 aa12.38□□□□□ -0.43
NLRP3-201ENST00000336119 AKNAQ7Z591 1439 aa12.38□□□□□ -0.43
NLRP3-201ENST00000336119 KIF15Q9NS87 1388 aa12.38□□□□□ -0.43
NLRP3-201ENST00000336119 KANK1Q14678 1352 aa12.37□□□□□ -0.43
NLRP3-201ENST00000336119 ADAMTS12P58397 1594 aa12.37□□□□□ -0.43
NLRP3-201ENST00000336119 USP47Q96K76 1375 aa12.37□□□□□ -0.43
NLRP3-201ENST00000336119 KNSTRNQ9Y448 316 aa12.37□□□□□ -0.43
NLRP3-201ENST00000336119 ABCC5O15440 1437 aa12.36□□□□□ -0.43
NLRP3-201ENST00000336119 RALBP1Q15311 655 aa12.36□□□□□ -0.43
NLRP3-201ENST00000336119 CCDC144AA2RUR9 1427 aa12.35□□□□□ -0.43
NLRP3-201ENST00000336119 CNTLNQ9NXG0 1405 aa12.35□□□□□ -0.43
NLRP3-201ENST00000336119 SLC24A1O60721 1099 aa12.35□□□□□ -0.43
NLRP3-201ENST00000336119 SPAG9O60271 1321 aaKnown RBP12.35□□□□□ -0.43
NLRP3-201ENST00000336119 NUP160Q12769 1436 aa12.35□□□□□ -0.43
NLRP3-201ENST00000336119 ST20-MTHFSA0A0A6YYL1 179 aa12.34□□□□□ -0.43
NLRP3-201ENST00000336119 NBPF8Q3BBV2 869 aa12.34□□□□□ -0.43
NLRP3-201ENST00000336119 KIAA1107Q9UPP5 1409 aa12.34□□□□□ -0.43
NLRP3-201ENST00000336119 KIF7Q2M1P5 1343 aa12.34□□□□□ -0.43
NLRP3-201ENST00000336119 SAMD9Q5K651 1589 aa12.34□□□□□ -0.43
NLRP3-201ENST00000336119 PLB1Q6P1J6 1458 aa12.34□□□□□ -0.43
NLRP3-201ENST00000336119 ANKRD30BQ9BXX2 1392 aa12.33□□□□□ -0.44
NLRP3-201ENST00000336119 PBRM1Q86U86 1689 aa12.33□□□□□ -0.44
NLRP3-201ENST00000336119 ANP32AP39687 249 aaKnown RBP12.33□□□□□ -0.44
NLRP3-201ENST00000336119 ARID4BQ4LE39 1312 aaPredicted RBP12.33□□□□□ -0.44
NLRP3-201ENST00000336119 C9orf84Q5VXU9 1444 aa12.33□□□□□ -0.44
NLRP3-201ENST00000336119 TCOF1Q13428 1488 aaKnown RBP12.33□□□□□ -0.44
NLRP3-201ENST00000336119 SENP3-EIF4A1A0A087X0R7 540 aa12.32□□□□□ -0.44
NLRP3-201ENST00000336119 KTN1Q86UP2 1357 aaKnown RBP12.32□□□□□ -0.44
NLRP3-201ENST00000336119 CC2D1BQ5T0F9 858 aaKnown RBP12.31□□□□□ -0.44
NLRP3-201ENST00000336119 CANXP27824 592 aaKnown RBP12.31□□□□□ -0.44
NLRP3-201ENST00000336119 ESF1Q9H501 851 aaKnown RBP12.31□□□□□ -0.44
NLRP3-201ENST00000336119 CAMSAP2Q08AD1 1489 aa12.3□□□□□ -0.44
NLRP3-201ENST00000336119 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.3□□□□□ -0.44
NLRP3-201ENST00000336119 TSHZ2Q9NRE2 1034 aa12.3□□□□□ -0.44
NLRP3-201ENST00000336119 STAG3Q9UJ98 1225 aa12.3□□□□□ -0.44
NLRP3-201ENST00000336119 RTL5Q5HYW3 569 aaPredicted RBP12.3□□□□□ -0.44
NLRP3-201ENST00000336119 NCOA1Q15788 1441 aa12.29□□□□□ -0.44
NLRP3-201ENST00000336119 ARHGEF11O15085 1522 aa12.29□□□□□ -0.44
NLRP3-201ENST00000336119 NUP153P49790 1475 aaKnown RBP12.29□□□□□ -0.44
NLRP3-201ENST00000336119 RAPGEF6Q8TEU7 1601 aa12.29□□□□□ -0.44
NLRP3-201ENST00000336119 ZBED9Q6R2W3 1325 aa12.28□□□□□ -0.44
NLRP3-201ENST00000336119 KIF3BO15066 747 aa12.28□□□□□ -0.44
NLRP3-201ENST00000336119 CHD1O14646 1710 aa12.27□□□□□ -0.44
NLRP3-201ENST00000336119 B4GALNT3Q6L9W6 998 aa12.27□□□□□ -0.44
NLRP3-201ENST00000336119 PLPPR3Q6T4P5 718 aa12.27□□□□□ -0.45
NLRP3-201ENST00000336119 NLRP13Q86W25 1043 aa12.27□□□□□ -0.45
NLRP3-201ENST00000336119 KIAA0556O60303 1618 aa12.27□□□□□ -0.45
NLRP3-201ENST00000336119 NUDCQ9Y266 331 aa12.26□□□□□ -0.45
NLRP3-201ENST00000336119 RPRD2Q5VT52 1461 aaKnown RBP12.26□□□□□ -0.45
NLRP3-201ENST00000336119 GPATCH8Q9UKJ3 1502 aaKnown RBP12.26□□□□□ -0.45
NLRP3-201ENST00000336119 MYBBP1AQ9BQG0 1328 aaKnown RBP12.25□□□□□ -0.45
NLRP3-201ENST00000336119 ARHGAP5Q13017 1502 aa12.25□□□□□ -0.45
NLRP3-201ENST00000336119 NEFMP07197 916 aa12.25□□□□□ -0.45
NLRP3-201ENST00000336119 RBM19Q9Y4C8 960 aaKnown RBP12.24□□□□□ -0.45
NLRP3-201ENST00000336119 PLEKHH2Q8IVE3 1493 aa12.24□□□□□ -0.45
NLRP3-201ENST00000336119 CEP170Q5SW79 1584 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms