RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 NOP58Q9Y2X3 529 aaKnown RBP19.71■□□□□ 0.75
SNX20-202ENST00000330943 GAPVD1Q14C86 1478 aa19.71■□□□□ 0.75
SNX20-202ENST00000330943 THOC2Q8NI27 1593 aaKnown RBP19.7■□□□□ 0.74
SNX20-202ENST00000330943 MAGI3Q5TCQ9 1506 aa19.68■□□□□ 0.74
SNX20-202ENST00000330943 NBR1Q14596 966 aa19.68■□□□□ 0.74
SNX20-202ENST00000330943 ARHGEF11O15085 1522 aa19.67■□□□□ 0.74
SNX20-202ENST00000330943 LAMC3Q9Y6N6 1575 aa19.66■□□□□ 0.74
SNX20-202ENST00000330943 TCOF1Q13428 1488 aaKnown RBP19.66■□□□□ 0.74
SNX20-202ENST00000330943 PAK3O75914 559 aaPredicted RBP19.65■□□□□ 0.74
SNX20-202ENST00000330943 NBPF8Q3BBV2 869 aa19.65■□□□□ 0.74
SNX20-202ENST00000330943 KIF7Q2M1P5 1343 aa19.65■□□□□ 0.74
SNX20-202ENST00000330943 AKNAQ7Z591 1439 aa19.64■□□□□ 0.73
SNX20-202ENST00000330943 CNGB1Q14028 1251 aaPredicted RBP19.63■□□□□ 0.73
SNX20-202ENST00000330943 SMG6Q86US8 1419 aaKnown RBP19.6■□□□□ 0.73
SNX20-202ENST00000330943 CCDC136Q96JN2 1154 aa19.59■□□□□ 0.73
SNX20-202ENST00000330943 ZNF608Q9ULD9 1512 aaPredicted RBP19.59■□□□□ 0.73
SNX20-202ENST00000330943 RPRD2Q5VT52 1461 aaKnown RBP19.59■□□□□ 0.73
SNX20-202ENST00000330943 TEX14Q8IWB6 1497 aa19.57■□□□□ 0.72
SNX20-202ENST00000330943 ANKRD30BQ9BXX2 1392 aa19.57■□□□□ 0.72
SNX20-202ENST00000330943 SPATA31E1Q6ZUB1 1445 aa19.57■□□□□ 0.72
SNX20-202ENST00000330943 POLR1AO95602 1720 aaPredicted RBP19.57■□□□□ 0.72
SNX20-202ENST00000330943 NUDCQ9Y266 331 aa19.57■□□□□ 0.72
SNX20-202ENST00000330943 ABCA5Q8WWZ7 1642 aa19.56■□□□□ 0.72
SNX20-202ENST00000330943 ANP32AP39687 249 aaKnown RBP19.56■□□□□ 0.72
SNX20-202ENST00000330943 SENP3-EIF4A1A0A087X0R7 540 aa19.54■□□□□ 0.72
SNX20-202ENST00000330943 POLR3GLQ9BT43 218 aa19.54■□□□□ 0.72
SNX20-202ENST00000330943 MIA2Q96PC5 1412 aa19.53■□□□□ 0.72
SNX20-202ENST00000330943 IPO9Q96P70 1041 aaKnown RBP19.52■□□□□ 0.72
SNX20-202ENST00000330943 EPRSP07814 1512 aaKnown RBP19.51■□□□□ 0.71
SNX20-202ENST00000330943 CDK13Q14004 1512 aaKnown RBP19.51■□□□□ 0.71
SNX20-202ENST00000330943 SLC4A1APQ9BWU0 796 aaKnown RBP19.51■□□□□ 0.71
SNX20-202ENST00000330943 RNF123Q5XPI4 1314 aa19.5■□□□□ 0.71
SNX20-202ENST00000330943 DHX29Q7Z478 1369 aaKnown RBP19.5■□□□□ 0.71
SNX20-202ENST00000330943 ZBTB47Q9UFB7 747 aaPredicted RBP19.48■□□□□ 0.71
SNX20-202ENST00000330943 RTL5Q5HYW3 569 aaPredicted RBP19.48■□□□□ 0.71
SNX20-202ENST00000330943 ERCC6Q03468 1493 aa19.47■□□□□ 0.71
SNX20-202ENST00000330943 DAPK1P53355 1430 aa19.47■□□□□ 0.71
SNX20-202ENST00000330943 ZNF326Q5BKZ1 582 aaKnown RBP19.45■□□□□ 0.7
SNX20-202ENST00000330943 ROCK1Q13464 1354 aa19.45■□□□□ 0.7
SNX20-202ENST00000330943 TARBP1Q13395 1621 aaKnown RBP19.44■□□□□ 0.7
SNX20-202ENST00000330943 USP47Q96K76 1375 aa19.43■□□□□ 0.7
SNX20-202ENST00000330943 BCORL1Q5H9F3 1711 aa19.42■□□□□ 0.7
SNX20-202ENST00000330943 CHMP7Q8WUX9 453 aaPredicted RBP19.42■□□□□ 0.7
SNX20-202ENST00000330943 ABCC5O15440 1437 aa19.41■□□□□ 0.7
SNX20-202ENST00000330943 MRC2Q9UBG0 1479 aa19.41■□□□□ 0.7
SNX20-202ENST00000330943 ZNF644Q9H582 1327 aaPredicted RBP19.41■□□□□ 0.7
SNX20-202ENST00000330943 TMC1Q8TDI8 760 aa19.41■□□□□ 0.7
SNX20-202ENST00000330943 DNMT1P26358 1616 aaKnown RBP19.4■□□□□ 0.7
SNX20-202ENST00000330943 PNISRQ8TF01 805 aaKnown RBP19.4■□□□□ 0.7
SNX20-202ENST00000330943 WDR62O43379 1518 aa19.39■□□□□ 0.69
SNX20-202ENST00000330943 PRKCSHP14314 528 aaPredicted RBP19.38■□□□□ 0.69
SNX20-202ENST00000330943 NPM2Q86SE8 214 aaKnown RBP19.38■□□□□ 0.69
SNX20-202ENST00000330943 IQGAP2Q13576 1575 aa19.37■□□□□ 0.69
SNX20-202ENST00000330943 ZNF777Q9ULD5 760 aaPredicted RBP19.36■□□□□ 0.69
SNX20-202ENST00000330943 MBD5Q9P267 1494 aa19.36■□□□□ 0.69
SNX20-202ENST00000330943 PZPP20742 1482 aa19.36■□□□□ 0.69
SNX20-202ENST00000330943 KDM5CP41229 1560 aa19.33■□□□□ 0.68
SNX20-202ENST00000330943 KIF14Q15058 1648 aa19.32■□□□□ 0.68
SNX20-202ENST00000330943 ARID4BQ4LE39 1312 aaPredicted RBP19.32■□□□□ 0.68
SNX20-202ENST00000330943 RRP1P56182 461 aaKnown RBP19.31■□□□□ 0.68
SNX20-202ENST00000330943 EXOC6Q8TAG9 804 aa19.31■□□□□ 0.68
SNX20-202ENST00000330943 PBRM1Q86U86 1689 aa19.3■□□□□ 0.68
SNX20-202ENST00000330943 KIAA1107Q9UPP5 1409 aa19.29■□□□□ 0.68
SNX20-202ENST00000330943 ROCK2O75116 1388 aaKnown RBP19.29■□□□□ 0.68
SNX20-202ENST00000330943 KIF15Q9NS87 1388 aa19.28■□□□□ 0.68
SNX20-202ENST00000330943 LRPPRCP42704 1394 aaKnown RBP19.28■□□□□ 0.68
SNX20-202ENST00000330943 PKD2Q13563 968 aa19.28■□□□□ 0.68
SNX20-202ENST00000330943 LAS1LQ9Y4W2 734 aaKnown RBP19.28■□□□□ 0.68
SNX20-202ENST00000330943 TCERG1O14776 1098 aaKnown RBP19.27■□□□□ 0.68
SNX20-202ENST00000330943 SALL2Q9Y467 1007 aaPredicted RBP19.27■□□□□ 0.68
SNX20-202ENST00000330943 CARD11Q9BXL7 1154 aa19.26■□□□□ 0.67
SNX20-202ENST00000330943 PDE4AP27815 886 aa19.25■□□□□ 0.67
SNX20-202ENST00000330943 RCAN3Q9UKA8 241 aa19.25■□□□□ 0.67
SNX20-202ENST00000330943 MYBBP1AQ9BQG0 1328 aaKnown RBP19.25■□□□□ 0.67
SNX20-202ENST00000330943 BRD4O60885 1362 aaPredicted RBP19.25■□□□□ 0.67
SNX20-202ENST00000330943 ADAMTS12P58397 1594 aa19.24■□□□□ 0.67
SNX20-202ENST00000330943 NEFMP07197 916 aa19.24■□□□□ 0.67
SNX20-202ENST00000330943 IL27Q8NEV9 243 aa19.24■□□□□ 0.67
SNX20-202ENST00000330943 RALGAPBQ86X10 1494 aa19.22■□□□□ 0.67
SNX20-202ENST00000330943 CAMSAP2Q08AD1 1489 aa19.22■□□□□ 0.67
SNX20-202ENST00000330943 ANO8Q9HCE9 1232 aaPredicted RBP19.21■□□□□ 0.67
SNX20-202ENST00000330943 IFT140Q96RY7 1462 aa19.21■□□□□ 0.67
SNX20-202ENST00000330943 BACH2Q9BYV9 841 aa19.21■□□□□ 0.67
SNX20-202ENST00000330943 CFDP1Q9UEE9 299 aaPredicted RBP19.21■□□□□ 0.67
SNX20-202ENST00000330943 NUP153P49790 1475 aaKnown RBP19.21■□□□□ 0.67
SNX20-202ENST00000330943 ST20-MTHFSA0A0A6YYL1 179 aa19.21■□□□□ 0.67
SNX20-202ENST00000330943 RALBP1Q15311 655 aa19.21■□□□□ 0.67
SNX20-202ENST00000330943 ADGBQ8N7X0 1667 aa19.2■□□□□ 0.66
SNX20-202ENST00000330943 JPH4Q96JJ6 628 aa19.2■□□□□ 0.66
SNX20-202ENST00000330943 UHRF1BP1Q6BDS2 1440 aa19.19■□□□□ 0.66
SNX20-202ENST00000330943 RTN4Q9NQC3 1192 aaKnown RBP19.18■□□□□ 0.66
SNX20-202ENST00000330943 KDM2AQ9Y2K7 1162 aa19.18■□□□□ 0.66
SNX20-202ENST00000330943 PLB1Q6P1J6 1458 aa19.18■□□□□ 0.66
SNX20-202ENST00000330943 EIF4G3O43432 1585 aaKnown RBP19.18■□□□□ 0.66
SNX20-202ENST00000330943 KTN1Q86UP2 1357 aaKnown RBP19.18■□□□□ 0.66
SNX20-202ENST00000330943 MS4A1P11836 297 aa19.17■□□□□ 0.66
SNX20-202ENST00000330943 PRG4Q92954 1404 aaPredicted RBP19.17■□□□□ 0.66
SNX20-202ENST00000330943 USP35Q9P2H5 1018 aa19.16■□□□□ 0.66
SNX20-202ENST00000330943 GRIN2AQ12879 1464 aa19.16■□□□□ 0.66
SNX20-202ENST00000330943 RAPGEF6Q8TEU7 1601 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms