RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-223ENST00000324771 ERICH3Q5RHP9 1530 aa15.75■□□□□ 0.11
DDR1-223ENST00000324771 NCOA2Q15596 1464 aa15.73■□□□□ 0.11
DDR1-223ENST00000324771 MYOM3Q5VTT5 1437 aa15.73■□□□□ 0.11
DDR1-223ENST00000324771 ANP32AP39687 249 aaKnown RBP15.73■□□□□ 0.11
DDR1-223ENST00000324771 SPAG9O60271 1321 aaKnown RBP15.73■□□□□ 0.11
DDR1-223ENST00000324771 CCER2I3L3R5 266 aa15.72■□□□□ 0.11
DDR1-223ENST00000324771 CYB5RLQ6IPT4 315 aa15.72■□□□□ 0.11
DDR1-223ENST00000324771 CASKIN1Q8WXD9 1431 aa15.72■□□□□ 0.11
DDR1-223ENST00000324771 ROCK2O75116 1388 aaKnown RBP15.72■□□□□ 0.11
DDR1-223ENST00000324771 TMF1P82094 1093 aa15.72■□□□□ 0.11
DDR1-223ENST00000324771 POGKQ9P215 609 aa15.7■□□□□ 0.1
DDR1-223ENST00000324771 ZBTB7CA1YPR0 619 aa15.7■□□□□ 0.1
DDR1-223ENST00000324771 ANP32EQ9BTT0 268 aa15.7■□□□□ 0.1
DDR1-223ENST00000324771 RRBP1Q9P2E9 1410 aaKnown RBP15.69■□□□□ 0.1
DDR1-223ENST00000324771 C14orf37Q86TY3 774 aa15.69■□□□□ 0.1
DDR1-223ENST00000324771 SOX12O15370 315 aa15.68■□□□□ 0.1
DDR1-223ENST00000324771 NBR1Q14596 966 aa15.68■□□□□ 0.1
DDR1-223ENST00000324771 ZBTB47Q9UFB7 747 aaPredicted RBP15.68■□□□□ 0.1
DDR1-223ENST00000324771 AFAP1Q8N556 730 aa15.67■□□□□ 0.1
DDR1-223ENST00000324771 GRIN2BQ13224 1484 aa15.67■□□□□ 0.1
DDR1-223ENST00000324771 PRG4Q92954 1404 aaPredicted RBP15.66■□□□□ 0.1
DDR1-223ENST00000324771 PEG3Q9GZU2 1588 aa15.65■□□□□ 0.1
DDR1-223ENST00000324771 CDCA8Q53HL2 280 aa15.65■□□□□ 0.1
DDR1-223ENST00000324771 PRDM2Q13029 1718 aa15.65■□□□□ 0.1
DDR1-223ENST00000324771 TRHP20396 242 aaPredicted RBP15.65■□□□□ 0.1
DDR1-223ENST00000324771 U2SURPO15042 1029 aaKnown RBP15.64■□□□□ 0.09
DDR1-223ENST00000324771 SRPK2P78362 688 aaKnown RBP15.64■□□□□ 0.09
DDR1-223ENST00000324771 KANK1Q14678 1352 aa15.63■□□□□ 0.09
DDR1-223ENST00000324771 TRAK1Q9UPV9 953 aa15.62■□□□□ 0.09
DDR1-223ENST00000324771 FRAT1Q92837 279 aaPredicted RBP15.62■□□□□ 0.09
DDR1-223ENST00000324771 PRKRIP1Q9H875 184 aaPredicted RBP15.62■□□□□ 0.09
DDR1-223ENST00000324771 LAS1LQ9Y4W2 734 aaKnown RBP15.62■□□□□ 0.09
DDR1-223ENST00000324771 NBPF8Q3BBV2 869 aa15.61■□□□□ 0.09
DDR1-223ENST00000324771 DNMBPQ6XZF7 1577 aa15.6■□□□□ 0.09
DDR1-223ENST00000324771 UACAQ9BZF9 1416 aa15.6■□□□□ 0.09
DDR1-223ENST00000324771 WASHC2CQ9Y4E1 1318 aa15.6■□□□□ 0.09
DDR1-223ENST00000324771 URB2Q14146 1524 aaKnown RBP15.6■□□□□ 0.09
DDR1-223ENST00000324771 SNAPC4Q5SXM2 1469 aa15.6■□□□□ 0.09
DDR1-223ENST00000324771 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.59■□□□□ 0.09
DDR1-223ENST00000324771 CDK13Q14004 1512 aaKnown RBP15.59■□□□□ 0.09
DDR1-223ENST00000324771 MRC2Q9UBG0 1479 aa15.59■□□□□ 0.09
DDR1-223ENST00000324771 PPP4R2Q9NY27 417 aa15.59■□□□□ 0.09
DDR1-223ENST00000324771 KIF15Q9NS87 1388 aa15.58■□□□□ 0.09
DDR1-223ENST00000324771 ABCA10Q8WWZ4 1543 aa15.58■□□□□ 0.09
DDR1-223ENST00000324771 ZNF608Q9ULD9 1512 aaPredicted RBP15.58■□□□□ 0.09
DDR1-223ENST00000324771 FYCO1Q9BQS8 1478 aa15.58■□□□□ 0.08
DDR1-223ENST00000324771 WASHC2AQ641Q2 1341 aa15.58■□□□□ 0.08
DDR1-223ENST00000324771 TIAM1Q13009 1591 aa15.58■□□□□ 0.08
DDR1-223ENST00000324771 RSPH4AQ5TD94 716 aa15.58■□□□□ 0.08
DDR1-223ENST00000324771 RGS3P49796 1198 aa15.57■□□□□ 0.08
DDR1-223ENST00000324771 PANK3Q9H999 370 aa15.57■□□□□ 0.08
DDR1-223ENST00000324771 NUTM2FA1L443 756 aa15.57■□□□□ 0.08
DDR1-223ENST00000324771 USP47Q96K76 1375 aa15.57■□□□□ 0.08
DDR1-223ENST00000324771 CCDC146Q8IYE0 955 aa15.57■□□□□ 0.08
DDR1-223ENST00000324771 OSCARQ8IYS5 282 aa15.56■□□□□ 0.08
DDR1-223ENST00000324771 MORC1Q86VD1 984 aa15.56■□□□□ 0.08
DDR1-223ENST00000324771 CCDC144AA2RUR9 1427 aa15.55■□□□□ 0.08
DDR1-223ENST00000324771 CFAP53Q96M91 514 aa15.55■□□□□ 0.08
DDR1-223ENST00000324771 KIF7Q2M1P5 1343 aa15.55■□□□□ 0.08
DDR1-223ENST00000324771 ANKRD50Q9ULJ7 1429 aa15.55■□□□□ 0.08
DDR1-223ENST00000324771 NBPF1Q3BBV0 1214 aa15.54■□□□□ 0.08
DDR1-223ENST00000324771 LMOD2Q6P5Q4 547 aa15.54■□□□□ 0.08
DDR1-223ENST00000324771 KTN1Q86UP2 1357 aaKnown RBP15.53■□□□□ 0.08
DDR1-223ENST00000324771 CCDC184Q52MB2 194 aa15.53■□□□□ 0.08
DDR1-223ENST00000324771 PCF11O94913 1555 aaKnown RBP15.51■□□□□ 0.07
DDR1-223ENST00000324771 PLB1Q6P1J6 1458 aa15.5■□□□□ 0.07
DDR1-223ENST00000324771 IFT140Q96RY7 1462 aa15.49■□□□□ 0.07
DDR1-223ENST00000324771 ARXQ96QS3 562 aa15.48■□□□□ 0.07
DDR1-223ENST00000324771 RBM19Q9Y4C8 960 aaKnown RBP15.48■□□□□ 0.07
DDR1-223ENST00000324771 NAIPQ13075 1403 aa15.48■□□□□ 0.07
DDR1-223ENST00000324771 WDR97A6NE52 1622 aa15.48■□□□□ 0.07
DDR1-223ENST00000324771 TSHZ2Q9NRE2 1034 aa15.47■□□□□ 0.07
DDR1-223ENST00000324771 RRP7AQ9Y3A4 280 aaKnown RBP15.47■□□□□ 0.07
DDR1-223ENST00000324771 U2AF1L5P0DN76 240 aaPredicted RBP15.47■□□□□ 0.07
DDR1-223ENST00000324771 U2AF1Q01081 240 aaKnown RBP eCLIP15.47■□□□□ 0.07
DDR1-223ENST00000324771 MAPK8IP3Q9UPT6 1336 aa15.47■□□□□ 0.07
DDR1-223ENST00000324771 PLIN1O60240 522 aa15.46■□□□□ 0.07
DDR1-223ENST00000324771 TMEM132EQ6IEE7 984 aa15.46■□□□□ 0.07
DDR1-223ENST00000324771 NLRP13Q86W25 1043 aa15.46■□□□□ 0.07
DDR1-223ENST00000324771 EPRSP07814 1512 aaKnown RBP15.46■□□□□ 0.07
DDR1-223ENST00000324771 C11orf95C9JLR9 678 aaPredicted RBP15.46■□□□□ 0.07
DDR1-223ENST00000324771 RALBP1Q15311 655 aa15.46■□□□□ 0.07
DDR1-223ENST00000324771 CCDC7Q96M83 1385 aa15.46■□□□□ 0.07
DDR1-223ENST00000324771 EIF5BO60841 1220 aaKnown RBP15.46■□□□□ 0.07
DDR1-223ENST00000324771 RCAN3Q9UKA8 241 aa15.46■□□□□ 0.07
DDR1-223ENST00000324771 HFM1A2PYH4 1435 aa15.45■□□□□ 0.06
DDR1-223ENST00000324771 EFCAB5A4FU69 1503 aa15.45■□□□□ 0.06
DDR1-223ENST00000324771 NUDCQ9Y266 331 aa15.44■□□□□ 0.06
DDR1-223ENST00000324771 A0A0G2JS52 829 aa15.43■□□□□ 0.06
DDR1-223ENST00000324771 TROQ12816 1431 aaPredicted RBP15.43■□□□□ 0.06
DDR1-223ENST00000324771 BIVM-ERCC5R4GMW8 1640 aa15.43■□□□□ 0.06
DDR1-223ENST00000324771 FTSJ3Q8IY81 847 aaKnown RBP15.43■□□□□ 0.06
DDR1-223ENST00000324771 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.42■□□□□ 0.06
DDR1-223ENST00000324771 CFAP70Q5T0N1 1121 aa15.42■□□□□ 0.06
DDR1-223ENST00000324771 LAMC3Q9Y6N6 1575 aa15.42■□□□□ 0.06
DDR1-223ENST00000324771 PRKCSHP14314 528 aaPredicted RBP15.41■□□□□ 0.06
DDR1-223ENST00000324771 FAM69CQ0P6D2 419 aa15.41■□□□□ 0.06
DDR1-223ENST00000324771 KIAA0586Q9BVV6 1533 aa15.41■□□□□ 0.06
DDR1-223ENST00000324771 HSP90AA1P07900 732 aaKnown RBP15.41■□□□□ 0.06
DDR1-223ENST00000324771 CLUAP1Q96AJ1 413 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms