RNA–Protein interactions for RNA: ENST00000323441.10

HIF1A-201, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,555 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-201ENST00000323441 PLA2R1Q13018 1463 aa5.66□□□□□ -1.5
HIF1A-201ENST00000323441 AGLP35573 1532 aa5.66□□□□□ -1.5
HIF1A-201ENST00000323441 UHRF1BP1Q6BDS2 1440 aa5.66□□□□□ -1.5
HIF1A-201ENST00000323441 TCOF1Q13428 1488 aaKnown RBP5.66□□□□□ -1.5
HIF1A-201ENST00000323441 GOLGA3Q08378 1498 aa5.66□□□□□ -1.5
HIF1A-201ENST00000323441 SAMD9Q5K651 1589 aa5.66□□□□□ -1.5
HIF1A-201ENST00000323441 POLR1AO95602 1720 aaPredicted RBP5.65□□□□□ -1.5
HIF1A-201ENST00000323441 C9orf84Q5VXU9 1444 aa5.64□□□□□ -1.51
HIF1A-201ENST00000323441 CAMSAP1Q5T5Y3 1602 aa5.64□□□□□ -1.51
HIF1A-201ENST00000323441 MYO3AQ8NEV4 1616 aa5.64□□□□□ -1.51
HIF1A-201ENST00000323441 RAPGEF6Q8TEU7 1601 aa5.64□□□□□ -1.51
HIF1A-201ENST00000323441 CPS1P31327 1500 aa5.64□□□□□ -1.51
HIF1A-201ENST00000323441 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.64□□□□□ -1.51
HIF1A-201ENST00000323441 ATP10AO60312 1499 aa5.64□□□□□ -1.51
HIF1A-201ENST00000323441 DIP2CQ9Y2E4 1556 aa5.63□□□□□ -1.51
HIF1A-201ENST00000323441 RAPGEF3O95398 923 aa5.63□□□□□ -1.51
HIF1A-201ENST00000323441 RAPGEF2Q9Y4G8 1499 aa5.63□□□□□ -1.51
HIF1A-201ENST00000323441 SUPT6HQ7KZ85 1726 aaKnown RBP5.63□□□□□ -1.51
HIF1A-201ENST00000323441 NPATQ14207 1427 aa5.63□□□□□ -1.51
HIF1A-201ENST00000323441 NEURL4Q96JN8 1562 aa5.62□□□□□ -1.51
HIF1A-201ENST00000323441 ABCA6Q8N139 1617 aa5.62□□□□□ -1.51
HIF1A-201ENST00000323441 VWDEQ8N2E2 1590 aa5.61□□□□□ -1.51
HIF1A-201ENST00000323441 TRAPPC8Q9Y2L5 1435 aa5.61□□□□□ -1.51
HIF1A-201ENST00000323441 SETD1AO15047 1707 aaKnown RBP5.61□□□□□ -1.51
HIF1A-201ENST00000323441 SYNMO15061 1565 aa5.61□□□□□ -1.51
HIF1A-201ENST00000323441 STRCP1A6NGW2 1772 aa5.6□□□□□ -1.51
HIF1A-201ENST00000323441 RNF17Q9BXT8 1623 aaKnown RBP5.6□□□□□ -1.51
HIF1A-201ENST00000323441 RGS17Q9UGC6 210 aaPredicted RBP5.6□□□□□ -1.51
HIF1A-201ENST00000323441 XIRP1Q702N8 1843 aaKnown RBP5.59□□□□□ -1.51
HIF1A-201ENST00000323441 MYO5CQ9NQX4 1742 aa5.59□□□□□ -1.51
HIF1A-201ENST00000323441 DEPDC5O75140 1603 aa5.59□□□□□ -1.51
HIF1A-201ENST00000323441 CEP170BQ9Y4F5 1589 aaPredicted RBP5.59□□□□□ -1.52
HIF1A-201ENST00000323441 NUP153P49790 1475 aaKnown RBP5.59□□□□□ -1.52
HIF1A-201ENST00000323441 HSPA1LP34931 641 aa5.57□□□□□ -1.52
HIF1A-201ENST00000323441 DNMT1P26358 1616 aaKnown RBP5.57□□□□□ -1.52
HIF1A-201ENST00000323441 CNTLNQ9NXG0 1405 aa5.57□□□□□ -1.52
HIF1A-201ENST00000323441 KIDINS220Q9ULH0 1771 aa5.56□□□□□ -1.52
HIF1A-201ENST00000323441 ITSN2Q9NZM3 1697 aa5.56□□□□□ -1.52
HIF1A-201ENST00000323441 MLH3Q9UHC1 1453 aa5.56□□□□□ -1.52
HIF1A-201ENST00000323441 ARID4BQ4LE39 1312 aaPredicted RBP5.56□□□□□ -1.52
HIF1A-201ENST00000323441 PLXNC1O60486 1568 aa5.56□□□□□ -1.52
HIF1A-201ENST00000323441 KCNH8Q96L42 1107 aa5.56□□□□□ -1.52
HIF1A-201ENST00000323441 PTPRKQ15262 1439 aa5.56□□□□□ -1.52
HIF1A-201ENST00000323441 PLCH2O75038 1416 aa5.55□□□□□ -1.52
HIF1A-201ENST00000323441 MED14O60244 1454 aa5.55□□□□□ -1.52
HIF1A-201ENST00000323441 ZC3H13Q5T200 1668 aaKnown RBP5.55□□□□□ -1.52
HIF1A-201ENST00000323441 ZNF335Q9H4Z2 1342 aaPredicted RBP5.55□□□□□ -1.52
HIF1A-201ENST00000323441 ZNF518AQ6AHZ1 1483 aa5.54□□□□□ -1.52
HIF1A-201ENST00000323441 SHANK2Q9UPX8 1470 aa5.54□□□□□ -1.52
HIF1A-201ENST00000323441 UBAP1LF5GYI3 381 aa5.54□□□□□ -1.52
HIF1A-201ENST00000323441 CDC42BPBQ9Y5S2 1711 aa5.54□□□□□ -1.52
HIF1A-201ENST00000323441 PKD2Q13563 968 aa5.54□□□□□ -1.52
HIF1A-201ENST00000323441 PRXQ9BXM0 1461 aa5.53□□□□□ -1.52
HIF1A-201ENST00000323441 CLTCQ00610 1675 aaKnown RBP5.53□□□□□ -1.52
HIF1A-201ENST00000323441 CEBPAP49715 358 aaPredicted RBP5.52□□□□□ -1.53
HIF1A-201ENST00000323441 PLPPR3Q6T4P5 718 aa5.52□□□□□ -1.53
HIF1A-201ENST00000323441 IQGAP1P46940 1657 aa5.51□□□□□ -1.53
HIF1A-201ENST00000323441 FAM135AQ9P2D6 1515 aa5.51□□□□□ -1.53
HIF1A-201ENST00000323441 A2ML1A8K2U0 1454 aa5.51□□□□□ -1.53
HIF1A-201ENST00000323441 SCAPERQ9BY12 1400 aa5.51□□□□□ -1.53
HIF1A-201ENST00000323441 ABCC1P33527 1531 aa5.51□□□□□ -1.53
HIF1A-201ENST00000323441 PREX2Q70Z35 1606 aa5.51□□□□□ -1.53
HIF1A-201ENST00000323441 TTBK1Q5TCY1 1321 aaPredicted RBP5.5□□□□□ -1.53
HIF1A-201ENST00000323441 LRRC7Q96NW7 1537 aa5.5□□□□□ -1.53
HIF1A-201ENST00000323441 CDK12Q9NYV4 1490 aaPredicted RBP5.5□□□□□ -1.53
HIF1A-201ENST00000323441 CDK13Q14004 1512 aaKnown RBP5.49□□□□□ -1.53
HIF1A-201ENST00000323441 INO80Q9ULG1 1556 aaPredicted RBP5.49□□□□□ -1.53
HIF1A-201ENST00000323441 LRP5O75197 1615 aa5.49□□□□□ -1.53
HIF1A-201ENST00000323441 LRRIQ1Q96JM4 1722 aa5.49□□□□□ -1.53
HIF1A-201ENST00000323441 KIF14Q15058 1648 aa5.48□□□□□ -1.53
HIF1A-201ENST00000323441 TOM1O60784 492 aa5.48□□□□□ -1.53
HIF1A-201ENST00000323441 FOXD1Q16676 465 aa5.48□□□□□ -1.53
HIF1A-201ENST00000323441 NCKAP5LQ9HCH0 1330 aa5.48□□□□□ -1.53
HIF1A-201ENST00000323441 POTEAQ6S8J7 498 aa5.47□□□□□ -1.53
HIF1A-201ENST00000323441 SHPRHQ149N8 1683 aa5.47□□□□□ -1.53
HIF1A-201ENST00000323441 ADGBQ8N7X0 1667 aa5.47□□□□□ -1.53
HIF1A-201ENST00000323441 SAMD9LQ8IVG5 1584 aa5.46□□□□□ -1.53
HIF1A-201ENST00000323441 FAM135BQ49AJ0 1406 aa5.46□□□□□ -1.54
HIF1A-201ENST00000323441 ROBO1Q9Y6N7 1651 aa5.46□□□□□ -1.54
HIF1A-201ENST00000323441 ZMYM3Q14202 1370 aa5.46□□□□□ -1.54
HIF1A-201ENST00000323441 CDC42BPAQ5VT25 1732 aa5.46□□□□□ -1.54
HIF1A-201ENST00000323441 UPF1Q92900 1129 aaKnown RBP eCLIP5.45□□□□□ -1.54
HIF1A-201ENST00000323441 COL16A1Q07092 1604 aaPredicted RBP5.45□□□□□ -1.54
HIF1A-201ENST00000323441 PPP6R1Q9UPN7 881 aa5.44□□□□□ -1.54
HIF1A-201ENST00000323441 MLECQ14165 292 aa5.44□□□□□ -1.54
HIF1A-201ENST00000323441 MAP3K1Q13233 1512 aa5.44□□□□□ -1.54
HIF1A-201ENST00000323441 CAMSAP2Q08AD1 1489 aa5.44□□□□□ -1.54
HIF1A-201ENST00000323441 ATP7AQ04656 1500 aa5.43□□□□□ -1.54
HIF1A-201ENST00000323441 KDM5DQ9BY66 1539 aa5.43□□□□□ -1.54
HIF1A-201ENST00000323441 NWD1Q149M9 1564 aa5.43□□□□□ -1.54
HIF1A-201ENST00000323441 PHLPP1O60346 1717 aa5.43□□□□□ -1.54
HIF1A-201ENST00000323441 KDM5AP29375 1690 aaKnown RBP5.43□□□□□ -1.54
HIF1A-201ENST00000323441 UBR1Q8IWV7 1749 aa5.43□□□□□ -1.54
HIF1A-201ENST00000323441 DIP2AQ14689 1571 aa5.42□□□□□ -1.54
HIF1A-201ENST00000323441 PZPP20742 1482 aa5.42□□□□□ -1.54
HIF1A-201ENST00000323441 LRRC9Q6ZRR7 1453 aa5.41□□□□□ -1.54
HIF1A-201ENST00000323441 NLRP1Q9C000 1473 aa5.41□□□□□ -1.54
HIF1A-201ENST00000323441 NPHP4O75161 1426 aaPredicted RBP5.41□□□□□ -1.54
HIF1A-201ENST00000323441 LRP6O75581 1613 aa5.41□□□□□ -1.54
HIF1A-201ENST00000323441 ARHGAP5Q13017 1502 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms