RNA–Protein interactions for RNA: ENST00000321110.1

RTL3-201, Transcript of retrotransposon Gag like 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RTL3, Length 2,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3-201ENST00000321110 PTPN23Q9H3S7 1636 aa10.56□□□□□ -0.72
RTL3-201ENST00000321110 RRP1P56182 461 aaKnown RBP10.56□□□□□ -0.72
RTL3-201ENST00000321110 GLIPR1L2Q4G1C9 344 aa10.56□□□□□ -0.72
RTL3-201ENST00000321110 SKAP1Q86WV1 359 aa10.56□□□□□ -0.72
RTL3-201ENST00000321110 KIF7Q2M1P5 1343 aa10.55□□□□□ -0.72
RTL3-201ENST00000321110 FGD5Q6ZNL6 1462 aa10.55□□□□□ -0.72
RTL3-201ENST00000321110 RRAGDQ9NQL2 400 aaPredicted RBP10.55□□□□□ -0.72
RTL3-201ENST00000321110 CARMIL1Q5VZK9 1371 aa10.55□□□□□ -0.72
RTL3-201ENST00000321110 FRAT2O75474 233 aaPredicted RBP10.54□□□□□ -0.72
RTL3-201ENST00000321110 DAXXQ9UER7 740 aaPredicted RBP10.54□□□□□ -0.72
RTL3-201ENST00000321110 PCF11O94913 1555 aaKnown RBP10.54□□□□□ -0.72
RTL3-201ENST00000321110 NAIPQ13075 1403 aa10.54□□□□□ -0.72
RTL3-201ENST00000321110 CNGB1Q14028 1251 aaPredicted RBP10.53□□□□□ -0.72
RTL3-201ENST00000321110 FGD6Q6ZV73 1430 aa10.53□□□□□ -0.72
RTL3-201ENST00000321110 DHX29Q7Z478 1369 aaKnown RBP10.53□□□□□ -0.72
RTL3-201ENST00000321110 DENND4BO75064 1496 aaPredicted RBP10.52□□□□□ -0.73
RTL3-201ENST00000321110 ATP1B4Q9UN42 357 aaPredicted RBP10.52□□□□□ -0.73
RTL3-201ENST00000321110 L3MBTL2Q969R5 705 aa10.51□□□□□ -0.73
RTL3-201ENST00000321110 ABCA5Q8WWZ7 1642 aa10.51□□□□□ -0.73
RTL3-201ENST00000321110 PNISRQ8TF01 805 aaKnown RBP10.51□□□□□ -0.73
RTL3-201ENST00000321110 FANCD2Q9BXW9 1451 aa10.5□□□□□ -0.73
RTL3-201ENST00000321110 PODXL2Q9NZ53 605 aa10.5□□□□□ -0.73
RTL3-201ENST00000321110 P3H3Q8IVL6 736 aa10.5□□□□□ -0.73
RTL3-201ENST00000321110 FMN1Q68DA7 1419 aa10.5□□□□□ -0.73
RTL3-201ENST00000321110 SPATA31E1Q6ZUB1 1445 aa10.5□□□□□ -0.73
RTL3-201ENST00000321110 PLEKHG5O94827 1062 aa10.49□□□□□ -0.73
RTL3-201ENST00000321110 NBPF8Q3BBV2 869 aa10.49□□□□□ -0.73
RTL3-201ENST00000321110 RCAN3Q9UKA8 241 aa10.48□□□□□ -0.73
RTL3-201ENST00000321110 LAMC3Q9Y6N6 1575 aa10.48□□□□□ -0.73
RTL3-201ENST00000321110 AEBP2Q6ZN18 517 aaPredicted RBP10.47□□□□□ -0.73
RTL3-201ENST00000321110 KIF21AQ7Z4S6 1674 aa10.46□□□□□ -0.73
RTL3-201ENST00000321110 POGKQ9P215 609 aa10.46□□□□□ -0.73
RTL3-201ENST00000321110 HSP90AA2PQ14568 343 aaPredicted RBP10.46□□□□□ -0.74
RTL3-201ENST00000321110 FYCO1Q9BQS8 1478 aa10.45□□□□□ -0.74
RTL3-201ENST00000321110 EFCAB5A4FU69 1503 aa10.45□□□□□ -0.74
RTL3-201ENST00000321110 DNMBPQ6XZF7 1577 aa10.45□□□□□ -0.74
RTL3-201ENST00000321110 CTTNBP2Q8WZ74 1663 aa10.44□□□□□ -0.74
RTL3-201ENST00000321110 LRPPRCP42704 1394 aaKnown RBP10.44□□□□□ -0.74
RTL3-201ENST00000321110 RRP9O43818 475 aaKnown RBP10.44□□□□□ -0.74
RTL3-201ENST00000321110 FHOD3Q2V2M9 1422 aa10.44□□□□□ -0.74
RTL3-201ENST00000321110 TMC1Q8TDI8 760 aa10.44□□□□□ -0.74
RTL3-201ENST00000321110 NAP1L5Q96NT1 182 aaPredicted RBP10.44□□□□□ -0.74
RTL3-201ENST00000321110 PDS5BQ9NTI5 1447 aa10.43□□□□□ -0.74
RTL3-201ENST00000321110 CUL7Q14999 1698 aa10.43□□□□□ -0.74
RTL3-201ENST00000321110 ERCC6Q03468 1493 aa10.43□□□□□ -0.74
RTL3-201ENST00000321110 PLIN1O60240 522 aa10.43□□□□□ -0.74
RTL3-201ENST00000321110 POLR1AO95602 1720 aaPredicted RBP10.43□□□□□ -0.74
RTL3-201ENST00000321110 ABCA10Q8WWZ4 1543 aa10.43□□□□□ -0.74
RTL3-201ENST00000321110 FOXD1Q16676 465 aa10.43□□□□□ -0.74
RTL3-201ENST00000321110 RRP7BPQ9NSQ0 103 aa10.43□□□□□ -0.74
RTL3-201ENST00000321110 CASKIN1Q8WXD9 1431 aa10.43□□□□□ -0.74
RTL3-201ENST00000321110 C8orf34Q49A92 452 aa10.42□□□□□ -0.74
RTL3-201ENST00000321110 HECW1Q76N89 1606 aa10.42□□□□□ -0.74
RTL3-201ENST00000321110 CRBNQ96SW2 442 aa10.42□□□□□ -0.74
RTL3-201ENST00000321110 RAD54L2Q9Y4B4 1467 aa10.42□□□□□ -0.74
RTL3-201ENST00000321110 HSP90AA1P07900 732 aaKnown RBP10.41□□□□□ -0.74
RTL3-201ENST00000321110 POLR3GLQ9BT43 218 aa10.41□□□□□ -0.74
RTL3-201ENST00000321110 POLA1P09884 1462 aaPredicted RBP10.4□□□□□ -0.74
RTL3-201ENST00000321110 TEX14Q8IWB6 1497 aa10.4□□□□□ -0.74
RTL3-201ENST00000321110 TOPBP1Q92547 1522 aa10.4□□□□□ -0.74
RTL3-201ENST00000321110 MPHOSPH9Q99550 1183 aa10.4□□□□□ -0.74
RTL3-201ENST00000321110 PNNQ9H307 717 aaKnown RBP10.4□□□□□ -0.74
RTL3-201ENST00000321110 KDM2BQ8NHM5 1336 aa10.4□□□□□ -0.74
RTL3-201ENST00000321110 KDM6BO15054 1643 aa10.4□□□□□ -0.75
RTL3-201ENST00000321110 FAM161AQ3B820 660 aa10.39□□□□□ -0.75
RTL3-201ENST00000321110 CLCN1P35523 988 aa10.39□□□□□ -0.75
RTL3-201ENST00000321110 CDCA7LQ96GN5 454 aa10.39□□□□□ -0.75
RTL3-201ENST00000321110 CHIC2Q9UKJ5 165 aa10.39□□□□□ -0.75
RTL3-201ENST00000321110 URB2Q14146 1524 aaKnown RBP10.39□□□□□ -0.75
RTL3-201ENST00000321110 MYOM3Q5VTT5 1437 aa10.39□□□□□ -0.75
RTL3-201ENST00000321110 L1TD1Q5T7N2 865 aaKnown RBP10.38□□□□□ -0.75
RTL3-201ENST00000321110 MIA2Q96PC5 1412 aa10.38□□□□□ -0.75
RTL3-201ENST00000321110 MTUS2Q5JR59 1369 aa10.38□□□□□ -0.75
RTL3-201ENST00000321110 BCORL1Q5H9F3 1711 aa10.38□□□□□ -0.75
RTL3-201ENST00000321110 RPRD2Q5VT52 1461 aaKnown RBP10.37□□□□□ -0.75
RTL3-201ENST00000321110 KTN1Q86UP2 1357 aaKnown RBP10.37□□□□□ -0.75
RTL3-201ENST00000321110 SNAPC4Q5SXM2 1469 aa10.37□□□□□ -0.75
RTL3-201ENST00000321110 C20orf194Q5TEA3 1177 aa10.37□□□□□ -0.75
RTL3-201ENST00000321110 XRCC6P12956 609 aaKnown RBP eCLIP10.36□□□□□ -0.75
RTL3-201ENST00000321110 ANKRD30BQ9BXX2 1392 aa10.36□□□□□ -0.75
RTL3-201ENST00000321110 PDE3BQ13370 1112 aa10.36□□□□□ -0.75
RTL3-201ENST00000321110 ARXQ96QS3 562 aa10.36□□□□□ -0.75
RTL3-201ENST00000321110 BRD4O60885 1362 aaPredicted RBP10.35□□□□□ -0.75
RTL3-201ENST00000321110 LRRIQ1Q96JM4 1722 aa10.35□□□□□ -0.75
RTL3-201ENST00000321110 PANK2Q9BZ23 570 aa10.35□□□□□ -0.75
RTL3-201ENST00000321110 SAMD9Q5K651 1589 aa10.35□□□□□ -0.75
RTL3-201ENST00000321110 GCC2Q8IWJ2 1684 aa10.34□□□□□ -0.75
RTL3-201ENST00000321110 USP47Q96K76 1375 aa10.34□□□□□ -0.75
RTL3-201ENST00000321110 MYBBP1AQ9BQG0 1328 aaKnown RBP10.34□□□□□ -0.75
RTL3-201ENST00000321110 MRC2Q9UBG0 1479 aa10.34□□□□□ -0.75
RTL3-201ENST00000321110 CENPQQ7L2Z9 268 aaPredicted RBP10.34□□□□□ -0.75
RTL3-201ENST00000321110 KIF15Q9NS87 1388 aa10.33□□□□□ -0.76
RTL3-201ENST00000321110 USP19O94966 1318 aa10.32□□□□□ -0.76
RTL3-201ENST00000321110 FSD2A1L4K1 749 aa10.32□□□□□ -0.76
RTL3-201ENST00000321110 THOC2Q8NI27 1593 aaKnown RBP10.31□□□□□ -0.76
RTL3-201ENST00000321110 RGS3P49796 1198 aa10.31□□□□□ -0.76
RTL3-201ENST00000321110 SLKQ9H2G2 1235 aaPredicted RBP10.31□□□□□ -0.76
RTL3-201ENST00000321110 SUPT6HQ7KZ85 1726 aaKnown RBP10.31□□□□□ -0.76
RTL3-201ENST00000321110 ARID4BQ4LE39 1312 aaPredicted RBP10.31□□□□□ -0.76
RTL3-201ENST00000321110 GOLGA6L3A6NEY3 463 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms