RNA–Protein interactions for RNA: ENST00000319685.12

TMTC1-202, Transcript of transmembrane and tetratricopeptide repeat containing 1, humanhuman

TSL 2

Gene TMTC1, Length 3,254 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC1-202ENST00000319685 CC2D2AQ9P2K1 1620 aa12.02□□□□□ -0.48
TMTC1-202ENST00000319685 RRP9O43818 475 aaKnown RBP12.02□□□□□ -0.49
TMTC1-202ENST00000319685 CRBNQ96SW2 442 aa12.02□□□□□ -0.49
TMTC1-202ENST00000319685 PHLDB1Q86UU1 1377 aa12.02□□□□□ -0.49
TMTC1-202ENST00000319685 NESP48681 1621 aa12.02□□□□□ -0.49
TMTC1-202ENST00000319685 ZBTB7CA1YPR0 619 aa12□□□□□ -0.49
TMTC1-202ENST00000319685 SMG6Q86US8 1419 aaKnown RBP11.99□□□□□ -0.49
TMTC1-202ENST00000319685 AEBP2Q6ZN18 517 aaPredicted RBP11.99□□□□□ -0.49
TMTC1-202ENST00000319685 SLC24A1O60721 1099 aa11.98□□□□□ -0.49
TMTC1-202ENST00000319685 C20orf194Q5TEA3 1177 aa11.98□□□□□ -0.49
TMTC1-202ENST00000319685 CNTLNQ9NXG0 1405 aa11.98□□□□□ -0.49
TMTC1-202ENST00000319685 CADPSQ9ULU8 1353 aa11.98□□□□□ -0.49
TMTC1-202ENST00000319685 L3MBTL2Q969R5 705 aa11.98□□□□□ -0.49
TMTC1-202ENST00000319685 XRCC6P12956 609 aaKnown RBP eCLIP11.97□□□□□ -0.49
TMTC1-202ENST00000319685 PRDM10Q9NQV6 1147 aa11.97□□□□□ -0.49
TMTC1-202ENST00000319685 CUX1P39880 1505 aa11.97□□□□□ -0.49
TMTC1-202ENST00000319685 ZHX1Q9UKY1 873 aaPredicted RBP11.96□□□□□ -0.49
TMTC1-202ENST00000319685 CUX2O14529 1486 aa11.96□□□□□ -0.49
TMTC1-202ENST00000319685 MS4A1P11836 297 aa11.96□□□□□ -0.49
TMTC1-202ENST00000319685 KIF7Q2M1P5 1343 aa11.96□□□□□ -0.5
TMTC1-202ENST00000319685 GOLGA6L3A6NEY3 463 aa11.95□□□□□ -0.5
TMTC1-202ENST00000319685 HMGXB3Q12766 1538 aa11.95□□□□□ -0.5
TMTC1-202ENST00000319685 FAM13BQ9NYF5 915 aa11.95□□□□□ -0.5
TMTC1-202ENST00000319685 CCDC7Q96M83 1385 aa11.95□□□□□ -0.5
TMTC1-202ENST00000319685 AAMPQ13685 434 aa11.94□□□□□ -0.5
TMTC1-202ENST00000319685 CFTRP13569 1480 aa11.94□□□□□ -0.5
TMTC1-202ENST00000319685 ARID3CA6NKF2 412 aa11.93□□□□□ -0.5
TMTC1-202ENST00000319685 L1TD1Q5T7N2 865 aaKnown RBP11.93□□□□□ -0.5
TMTC1-202ENST00000319685 KIF27Q86VH2 1401 aa11.93□□□□□ -0.5
TMTC1-202ENST00000319685 PDE4CQ08493 712 aa11.92□□□□□ -0.5
TMTC1-202ENST00000319685 TRIM44Q96DX7 344 aaPredicted RBP11.92□□□□□ -0.5
TMTC1-202ENST00000319685 RNF123Q5XPI4 1314 aa11.92□□□□□ -0.5
TMTC1-202ENST00000319685 FAM161AQ3B820 660 aa11.91□□□□□ -0.5
TMTC1-202ENST00000319685 NBPF8Q3BBV2 869 aa11.9□□□□□ -0.5
TMTC1-202ENST00000319685 RAD54L2Q9Y4B4 1467 aa11.9□□□□□ -0.5
TMTC1-202ENST00000319685 TOP2BQ02880 1626 aa11.89□□□□□ -0.51
TMTC1-202ENST00000319685 CLCN1P35523 988 aa11.89□□□□□ -0.51
TMTC1-202ENST00000319685 FGD1P98174 961 aa11.89□□□□□ -0.51
TMTC1-202ENST00000319685 PNISRQ8TF01 805 aaKnown RBP11.89□□□□□ -0.51
TMTC1-202ENST00000319685 BCL11BQ9C0K0 894 aaPredicted RBP11.89□□□□□ -0.51
TMTC1-202ENST00000319685 ERBB4Q15303 1308 aa11.89□□□□□ -0.51
TMTC1-202ENST00000319685 FANCD2Q9BXW9 1451 aa11.89□□□□□ -0.51
TMTC1-202ENST00000319685 C8orf34Q49A92 452 aa11.89□□□□□ -0.51
TMTC1-202ENST00000319685 MYH16Q9H6N6 1097 aa11.88□□□□□ -0.51
TMTC1-202ENST00000319685 FHAD1B1AJZ9 1412 aa11.88□□□□□ -0.51
TMTC1-202ENST00000319685 SEC24BO95487 1268 aa11.88□□□□□ -0.51
TMTC1-202ENST00000319685 TDRD9Q8NDG6 1382 aaKnown RBP11.88□□□□□ -0.51
TMTC1-202ENST00000319685 ESPNB1AK53 854 aa11.87□□□□□ -0.51
TMTC1-202ENST00000319685 MAPK8IP2Q13387 824 aaPredicted RBP11.87□□□□□ -0.51
TMTC1-202ENST00000319685 KIAA1211Q6ZU35 1233 aa11.87□□□□□ -0.51
TMTC1-202ENST00000319685 FGD5Q6ZNL6 1462 aa11.87□□□□□ -0.51
TMTC1-202ENST00000319685 AQRO60306 1485 aaKnown RBP eCLIP11.85□□□□□ -0.51
TMTC1-202ENST00000319685 CARMIL1Q5VZK9 1371 aa11.84□□□□□ -0.51
TMTC1-202ENST00000319685 CCDC18Q5T9S5 1454 aa11.83□□□□□ -0.52
TMTC1-202ENST00000319685 BBXQ8WY36 941 aaPredicted RBP11.82□□□□□ -0.52
TMTC1-202ENST00000319685 CC2D1BQ5T0F9 858 aaKnown RBP11.82□□□□□ -0.52
TMTC1-202ENST00000319685 PDCL3Q9H2J4 239 aa11.82□□□□□ -0.52
TMTC1-202ENST00000319685 IGF1RP08069 1367 aa11.82□□□□□ -0.52
TMTC1-202ENST00000319685 ARHGAP35Q9NRY4 1499 aa11.82□□□□□ -0.52
TMTC1-202ENST00000319685 FBLN2P98095 1184 aa11.81□□□□□ -0.52
TMTC1-202ENST00000319685 BECN1Q14457 450 aa11.81□□□□□ -0.52
TMTC1-202ENST00000319685 PRDM4Q9UKN5 801 aa11.81□□□□□ -0.52
TMTC1-202ENST00000319685 R3HCC1Q9Y3T6 440 aaKnown RBP11.81□□□□□ -0.52
TMTC1-202ENST00000319685 CHMP4BQ9H444 224 aaKnown RBP11.8□□□□□ -0.52
TMTC1-202ENST00000319685 KDM2AQ9Y2K7 1162 aa11.8□□□□□ -0.52
TMTC1-202ENST00000319685 FOXD4L1Q9NU39 408 aa11.8□□□□□ -0.52
TMTC1-202ENST00000319685 TRAK2O60296 914 aa11.79□□□□□ -0.52
TMTC1-202ENST00000319685 KTN1Q86UP2 1357 aaKnown RBP11.78□□□□□ -0.52
TMTC1-202ENST00000319685 GRPEL1Q9HAV7 217 aa11.78□□□□□ -0.52
TMTC1-202ENST00000319685 NCOA1Q15788 1441 aa11.77□□□□□ -0.52
TMTC1-202ENST00000319685 VGLL3A8MV65 326 aa11.77□□□□□ -0.52
TMTC1-202ENST00000319685 PRXQ9BXM0 1461 aa11.77□□□□□ -0.53
TMTC1-202ENST00000319685 PLCD3Q8N3E9 789 aa11.77□□□□□ -0.53
TMTC1-202ENST00000319685 BIVM-ERCC5R4GMW8 1640 aa11.77□□□□□ -0.53
TMTC1-202ENST00000319685 CENPQQ7L2Z9 268 aaPredicted RBP11.77□□□□□ -0.53
TMTC1-202ENST00000319685 LRRC9Q6ZRR7 1453 aa11.76□□□□□ -0.53
TMTC1-202ENST00000319685 MPHOSPH9Q99550 1183 aa11.76□□□□□ -0.53
TMTC1-202ENST00000319685 MCM4P33991 863 aa11.76□□□□□ -0.53
TMTC1-202ENST00000319685 PTPRKQ15262 1439 aa11.75□□□□□ -0.53
TMTC1-202ENST00000319685 CALD1Q05682 793 aaKnown RBP11.75□□□□□ -0.53
TMTC1-202ENST00000319685 IGSF3O75054 1194 aa11.74□□□□□ -0.53
TMTC1-202ENST00000319685 UACAQ9BZF9 1416 aa11.74□□□□□ -0.53
TMTC1-202ENST00000319685 NCOA2Q15596 1464 aa11.74□□□□□ -0.53
TMTC1-202ENST00000319685 MRE11P49959 708 aa11.74□□□□□ -0.53
TMTC1-202ENST00000319685 TBC1D2Q9BYX2 928 aa11.74□□□□□ -0.53
TMTC1-202ENST00000319685 POLA1P09884 1462 aaPredicted RBP11.73□□□□□ -0.53
TMTC1-202ENST00000319685 MSNP26038 577 aaKnown RBP11.73□□□□□ -0.53
TMTC1-202ENST00000319685 CANXP27824 592 aaKnown RBP11.73□□□□□ -0.53
TMTC1-202ENST00000319685 GAS2L3Q86XJ1 694 aa11.73□□□□□ -0.53
TMTC1-202ENST00000319685 MPNDQ8N594 471 aa11.73□□□□□ -0.53
TMTC1-202ENST00000319685 SLC4A1APQ9BWU0 796 aaKnown RBP11.73□□□□□ -0.53
TMTC1-202ENST00000319685 UPF2Q9HAU5 1272 aaKnown RBP11.72□□□□□ -0.53
TMTC1-202ENST00000319685 FHOD3Q2V2M9 1422 aa11.72□□□□□ -0.53
TMTC1-202ENST00000319685 MAP3K1Q13233 1512 aa11.72□□□□□ -0.53
TMTC1-202ENST00000319685 TOPBP1Q92547 1522 aa11.72□□□□□ -0.53
TMTC1-202ENST00000319685 TPM2P07951 284 aa11.72□□□□□ -0.53
TMTC1-202ENST00000319685 XPCQ01831 940 aaPredicted RBP11.72□□□□□ -0.53
TMTC1-202ENST00000319685 JARID2Q92833 1246 aaPredicted RBP11.72□□□□□ -0.53
TMTC1-202ENST00000319685 DHX29Q7Z478 1369 aaKnown RBP11.71□□□□□ -0.53
TMTC1-202ENST00000319685 MTUS2Q5JR59 1369 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms