RNA–Protein interactions for RNA: ENST00000319406.8

LCLAT1-202, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 2 BASIC

Gene LCLAT1, Length 2,774 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-202ENST00000319406 RRP7BPQ9NSQ0 103 aa14.36□□□□□ -0.11
LCLAT1-202ENST00000319406 TONSLQ96HA7 1378 aa14.36□□□□□ -0.11
LCLAT1-202ENST00000319406 PRKCSHP14314 528 aaPredicted RBP14.35□□□□□ -0.11
LCLAT1-202ENST00000319406 PLB1Q6P1J6 1458 aa14.35□□□□□ -0.11
LCLAT1-202ENST00000319406 TROQ12816 1431 aaPredicted RBP14.35□□□□□ -0.11
LCLAT1-202ENST00000319406 ARID3CA6NKF2 412 aa14.35□□□□□ -0.11
LCLAT1-202ENST00000319406 CHMP7Q8WUX9 453 aaPredicted RBP14.34□□□□□ -0.11
LCLAT1-202ENST00000319406 CHIC2Q9UKJ5 165 aa14.34□□□□□ -0.11
LCLAT1-202ENST00000319406 PRG4Q92954 1404 aaPredicted RBP14.33□□□□□ -0.12
LCLAT1-202ENST00000319406 ABCA8O94911 1581 aa14.32□□□□□ -0.12
LCLAT1-202ENST00000319406 KIF14Q15058 1648 aa14.31□□□□□ -0.12
LCLAT1-202ENST00000319406 ITSN2Q9NZM3 1697 aa14.3□□□□□ -0.12
LCLAT1-202ENST00000319406 GPATCH8Q9UKJ3 1502 aaKnown RBP14.3□□□□□ -0.12
LCLAT1-202ENST00000319406 CARMIL2Q6F5E8 1435 aa14.3□□□□□ -0.12
LCLAT1-202ENST00000319406 ZNF644Q9H582 1327 aaPredicted RBP14.29□□□□□ -0.12
LCLAT1-202ENST00000319406 JPH4Q96JJ6 628 aa14.29□□□□□ -0.12
LCLAT1-202ENST00000319406 CDK11AQ9UQ88 783 aaPredicted RBP14.29□□□□□ -0.12
LCLAT1-202ENST00000319406 CAMSAP2Q08AD1 1489 aa14.29□□□□□ -0.12
LCLAT1-202ENST00000319406 DDX10Q13206 875 aaKnown RBP14.27□□□□□ -0.12
LCLAT1-202ENST00000319406 MPHOSPH9Q99550 1183 aa14.27□□□□□ -0.12
LCLAT1-202ENST00000319406 CROCC2H7BZ55 1655 aa14.27□□□□□ -0.13
LCLAT1-202ENST00000319406 ADGRL2O95490 1459 aa14.26□□□□□ -0.13
LCLAT1-202ENST00000319406 ADGBQ8N7X0 1667 aa14.25□□□□□ -0.13
LCLAT1-202ENST00000319406 ABCC10Q5T3U5 1492 aa14.25□□□□□ -0.13
LCLAT1-202ENST00000319406 ANKRD30BQ9BXX2 1392 aa14.25□□□□□ -0.13
LCLAT1-202ENST00000319406 HIRIP3Q9BW71 556 aaPredicted RBP14.24□□□□□ -0.13
LCLAT1-202ENST00000319406 NCOA1Q15788 1441 aa14.23□□□□□ -0.13
LCLAT1-202ENST00000319406 ATP10BO94823 1461 aa14.23□□□□□ -0.13
LCLAT1-202ENST00000319406 RPRD2Q5VT52 1461 aaKnown RBP14.23□□□□□ -0.13
LCLAT1-202ENST00000319406 FBLN2P98095 1184 aa14.22□□□□□ -0.13
LCLAT1-202ENST00000319406 CDC42BPAQ5VT25 1732 aa14.22□□□□□ -0.13
LCLAT1-202ENST00000319406 TEX14Q8IWB6 1497 aa14.22□□□□□ -0.13
LCLAT1-202ENST00000319406 TRIM52Q96A61 297 aa14.22□□□□□ -0.13
LCLAT1-202ENST00000319406 PZPP20742 1482 aa14.21□□□□□ -0.13
LCLAT1-202ENST00000319406 CFDP1Q9UEE9 299 aaPredicted RBP14.2□□□□□ -0.14
LCLAT1-202ENST00000319406 NEFLP07196 543 aa14.18□□□□□ -0.14
LCLAT1-202ENST00000319406 CCER2I3L3R5 266 aa14.18□□□□□ -0.14
LCLAT1-202ENST00000319406 SHANK2Q9UPX8 1470 aa14.18□□□□□ -0.14
LCLAT1-202ENST00000319406 FOXD1Q16676 465 aa14.17□□□□□ -0.14
LCLAT1-202ENST00000319406 SHROOM2Q13796 1616 aa14.17□□□□□ -0.14
LCLAT1-202ENST00000319406 FANCIQ9NVI1 1328 aa14.17□□□□□ -0.14
LCLAT1-202ENST00000319406 L3MBTL2Q969R5 705 aa14.17□□□□□ -0.14
LCLAT1-202ENST00000319406 CHD1O14646 1710 aa14.15□□□□□ -0.14
LCLAT1-202ENST00000319406 HSPA5P11021 654 aaKnown RBP14.13□□□□□ -0.15
LCLAT1-202ENST00000319406 MBD5Q9P267 1494 aa14.13□□□□□ -0.15
LCLAT1-202ENST00000319406 WASHC2AQ641Q2 1341 aa14.13□□□□□ -0.15
LCLAT1-202ENST00000319406 PLEKHD1A6NEE1 506 aa14.13□□□□□ -0.15
LCLAT1-202ENST00000319406 ARHGEF5Q12774 1597 aa14.13□□□□□ -0.15
LCLAT1-202ENST00000319406 ANKRD30AQ9BXX3 1397 aa14.12□□□□□ -0.15
LCLAT1-202ENST00000319406 PTPRGP23470 1445 aa14.12□□□□□ -0.15
LCLAT1-202ENST00000319406 KDM5DQ9BY66 1539 aa14.12□□□□□ -0.15
LCLAT1-202ENST00000319406 ANP32CO43423 234 aa14.11□□□□□ -0.15
LCLAT1-202ENST00000319406 SLC4A1APQ9BWU0 796 aaKnown RBP14.11□□□□□ -0.15
LCLAT1-202ENST00000319406 KIAA1107Q9UPP5 1409 aa14.11□□□□□ -0.15
LCLAT1-202ENST00000319406 SPATA31E1Q6ZUB1 1445 aa14.11□□□□□ -0.15
LCLAT1-202ENST00000319406 NBPF8Q3BBV2 869 aa14.11□□□□□ -0.15
LCLAT1-202ENST00000319406 C9orf84Q5VXU9 1444 aa14.1□□□□□ -0.15
LCLAT1-202ENST00000319406 ANKRD50Q9ULJ7 1429 aa14.1□□□□□ -0.15
LCLAT1-202ENST00000319406 PREX2Q70Z35 1606 aa14.1□□□□□ -0.15
LCLAT1-202ENST00000319406 CDC42BPBQ9Y5S2 1711 aa14.09□□□□□ -0.15
LCLAT1-202ENST00000319406 EIF4G2P78344 907 aaKnown RBP eCLIP14.09□□□□□ -0.152e-9■■■■■ 39.4
LCLAT1-202ENST00000319406 ZNF777Q9ULD5 760 aaPredicted RBP14.09□□□□□ -0.15
LCLAT1-202ENST00000319406 SAMD9LQ8IVG5 1584 aa14.09□□□□□ -0.15
LCLAT1-202ENST00000319406 DEKP35659 375 aaKnown RBP14.08□□□□□ -0.16
LCLAT1-202ENST00000319406 ERICH6Q7L0X2 663 aa14.07□□□□□ -0.16
LCLAT1-202ENST00000319406 POLR1AO95602 1720 aaPredicted RBP14.07□□□□□ -0.16
LCLAT1-202ENST00000319406 CNTLNQ9NXG0 1405 aa14.06□□□□□ -0.16
LCLAT1-202ENST00000319406 ERCC6L2Q5T890 1561 aa14.05□□□□□ -0.16
LCLAT1-202ENST00000319406 C11orf95C9JLR9 678 aaPredicted RBP14.05□□□□□ -0.16
LCLAT1-202ENST00000319406 CCDC7Q96M83 1385 aa14.04□□□□□ -0.16
LCLAT1-202ENST00000319406 CCDC141Q6ZP82 1450 aa14.04□□□□□ -0.16
LCLAT1-202ENST00000319406 TTC37Q6PGP7 1564 aa14.03□□□□□ -0.16
LCLAT1-202ENST00000319406 ABCC2Q92887 1545 aa14.03□□□□□ -0.16
LCLAT1-202ENST00000319406 ANO8Q9HCE9 1232 aaPredicted RBP14.03□□□□□ -0.16
LCLAT1-202ENST00000319406 IRX6P78412 446 aaPredicted RBP14.03□□□□□ -0.16
LCLAT1-202ENST00000319406 MAST1Q9Y2H9 1570 aa14.02□□□□□ -0.16
LCLAT1-202ENST00000319406 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.02□□□□□ -0.16
LCLAT1-202ENST00000319406 PKD2Q13563 968 aa14.02□□□□□ -0.17
LCLAT1-202ENST00000319406 KIF15Q9NS87 1388 aa14.02□□□□□ -0.17
LCLAT1-202ENST00000319406 UHRF1BP1Q6BDS2 1440 aa14.01□□□□□ -0.17
LCLAT1-202ENST00000319406 CLASP1Q7Z460 1538 aa14.01□□□□□ -0.17
LCLAT1-202ENST00000319406 ARHGEF12Q9NZN5 1544 aa13.99□□□□□ -0.17
LCLAT1-202ENST00000319406 NUP155O75694 1391 aa13.99□□□□□ -0.17
LCLAT1-202ENST00000319406 HNRNPMP52272 730 aaKnown RBP eCLIP13.99□□□□□ -0.17
LCLAT1-202ENST00000319406 MYT1LQ9UL68 1186 aa13.99□□□□□ -0.17
LCLAT1-202ENST00000319406 SYCP2Q9BX26 1530 aa13.98□□□□□ -0.17
LCLAT1-202ENST00000319406 TSPY4P0CV99 314 aa13.98□□□□□ -0.17
LCLAT1-202ENST00000319406 TSPY10P0CW01 314 aa13.98□□□□□ -0.17
LCLAT1-202ENST00000319406 KDM5CP41229 1560 aa13.98□□□□□ -0.17
LCLAT1-202ENST00000319406 KIF7Q2M1P5 1343 aa13.97□□□□□ -0.17
LCLAT1-202ENST00000319406 RSPH4AQ5TD94 716 aa13.97□□□□□ -0.17
LCLAT1-202ENST00000319406 UNC13BO14795 1591 aa13.97□□□□□ -0.17
LCLAT1-202ENST00000319406 BCORL1Q5H9F3 1711 aa13.96□□□□□ -0.17
LCLAT1-202ENST00000319406 RALGAPBQ86X10 1494 aa13.96□□□□□ -0.17
LCLAT1-202ENST00000319406 MYO5CQ9NQX4 1742 aa13.96□□□□□ -0.17
LCLAT1-202ENST00000319406 FAM135AQ9P2D6 1515 aa13.96□□□□□ -0.17
LCLAT1-202ENST00000319406 PLXNC1O60486 1568 aa13.96□□□□□ -0.17
LCLAT1-202ENST00000319406 UHRF1BP1LA0JNW5 1464 aa13.96□□□□□ -0.18
LCLAT1-202ENST00000319406 ARHGAP5Q13017 1502 aa13.94□□□□□ -0.18
LCLAT1-202ENST00000319406 PRKRIP1Q9H875 184 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms