RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 ANP32AP39687 249 aaKnown RBP13.03□□□□□ -0.32
RPGR-201ENST00000318842 MAP3K1Q13233 1512 aa13.03□□□□□ -0.32
RPGR-201ENST00000318842 LRRIQ1Q96JM4 1722 aa13.03□□□□□ -0.32
RPGR-201ENST00000318842 SNAPC4Q5SXM2 1469 aa13.02□□□□□ -0.33
RPGR-201ENST00000318842 CDCA7LQ96GN5 454 aa13.02□□□□□ -0.33
RPGR-201ENST00000318842 IPO9Q96P70 1041 aaKnown RBP13.02□□□□□ -0.33
RPGR-201ENST00000318842 RTL5Q5HYW3 569 aaPredicted RBP13.01□□□□□ -0.33
RPGR-201ENST00000318842 FANCD2Q9BXW9 1451 aa13.01□□□□□ -0.33
RPGR-201ENST00000318842 TMC1Q8TDI8 760 aa13.01□□□□□ -0.33
RPGR-201ENST00000318842 CDK13Q14004 1512 aaKnown RBP13.01□□□□□ -0.33
RPGR-201ENST00000318842 NCOA1Q15788 1441 aa13□□□□□ -0.33
RPGR-201ENST00000318842 POLA1P09884 1462 aaPredicted RBP13□□□□□ -0.33
RPGR-201ENST00000318842 NUDCQ9Y266 331 aa13□□□□□ -0.33
RPGR-201ENST00000318842 NEFMP07197 916 aa12.98□□□□□ -0.33
RPGR-201ENST00000318842 HMGXB3Q12766 1538 aa12.98□□□□□ -0.33
RPGR-201ENST00000318842 BRPF3Q9ULD4 1205 aa12.95□□□□□ -0.34
RPGR-201ENST00000318842 DHX29Q7Z478 1369 aaKnown RBP12.94□□□□□ -0.34
RPGR-201ENST00000318842 CC2D1BQ5T0F9 858 aaKnown RBP12.93□□□□□ -0.34
RPGR-201ENST00000318842 PNISRQ8TF01 805 aaKnown RBP12.93□□□□□ -0.34
RPGR-201ENST00000318842 ST20-MTHFSA0A0A6YYL1 179 aa12.93□□□□□ -0.34
RPGR-201ENST00000318842 C20orf194Q5TEA3 1177 aa12.93□□□□□ -0.34
RPGR-201ENST00000318842 PKD2Q13563 968 aa12.93□□□□□ -0.34
RPGR-201ENST00000318842 USP47Q96K76 1375 aa12.92□□□□□ -0.34
RPGR-201ENST00000318842 RGL3Q3MIN7 710 aa12.92□□□□□ -0.34
RPGR-201ENST00000318842 ANKRD30BQ9BXX2 1392 aa12.92□□□□□ -0.34
RPGR-201ENST00000318842 TOPBP1Q92547 1522 aa12.91□□□□□ -0.34
RPGR-201ENST00000318842 PDE4AP27815 886 aa12.91□□□□□ -0.34
RPGR-201ENST00000318842 CARD11Q9BXL7 1154 aa12.91□□□□□ -0.34
RPGR-201ENST00000318842 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.9□□□□□ -0.34
RPGR-201ENST00000318842 GRIN2BQ13224 1484 aa12.9□□□□□ -0.34
RPGR-201ENST00000318842 SMG6Q86US8 1419 aaKnown RBP12.9□□□□□ -0.34
RPGR-201ENST00000318842 PDS5BQ9NTI5 1447 aa12.89□□□□□ -0.35
RPGR-201ENST00000318842 RRP1P56182 461 aaKnown RBP12.88□□□□□ -0.35
RPGR-201ENST00000318842 ARXQ96QS3 562 aa12.88□□□□□ -0.35
RPGR-201ENST00000318842 ERICH6BQ5W0A0 696 aa12.88□□□□□ -0.35
RPGR-201ENST00000318842 BCORL1Q5H9F3 1711 aa12.88□□□□□ -0.35
RPGR-201ENST00000318842 DCAF11Q8TEB1 546 aa12.88□□□□□ -0.35
RPGR-201ENST00000318842 SPATA31E1Q6ZUB1 1445 aa12.88□□□□□ -0.35
RPGR-201ENST00000318842 TEX14Q8IWB6 1497 aa12.87□□□□□ -0.35
RPGR-201ENST00000318842 RCAN3Q9UKA8 241 aa12.87□□□□□ -0.35
RPGR-201ENST00000318842 THOC2Q8NI27 1593 aaKnown RBP12.87□□□□□ -0.35
RPGR-201ENST00000318842 EFCAB5A4FU69 1503 aa12.87□□□□□ -0.35
RPGR-201ENST00000318842 CRBNQ96SW2 442 aa12.86□□□□□ -0.35
RPGR-201ENST00000318842 UGGT2Q9NYU1 1516 aa12.86□□□□□ -0.35
RPGR-201ENST00000318842 SUPT6HQ7KZ85 1726 aaKnown RBP12.86□□□□□ -0.35
RPGR-201ENST00000318842 ABCA10Q8WWZ4 1543 aa12.85□□□□□ -0.35
RPGR-201ENST00000318842 RPRD2Q5VT52 1461 aaKnown RBP12.84□□□□□ -0.35
RPGR-201ENST00000318842 FBLN2P98095 1184 aa12.84□□□□□ -0.35
RPGR-201ENST00000318842 NBPF1Q3BBV0 1214 aa12.84□□□□□ -0.35
RPGR-201ENST00000318842 CTTNBP2Q8WZ74 1663 aa12.83□□□□□ -0.36
RPGR-201ENST00000318842 RGS3P49796 1198 aa12.83□□□□□ -0.36
RPGR-201ENST00000318842 URB2Q14146 1524 aaKnown RBP12.83□□□□□ -0.36
RPGR-201ENST00000318842 EIF5BO60841 1220 aaKnown RBP12.83□□□□□ -0.36
RPGR-201ENST00000318842 ABCC5O15440 1437 aa12.82□□□□□ -0.36
RPGR-201ENST00000318842 GAPVD1Q14C86 1478 aa12.82□□□□□ -0.36
RPGR-201ENST00000318842 RNF123Q5XPI4 1314 aa12.81□□□□□ -0.36
RPGR-201ENST00000318842 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.81□□□□□ -0.36
RPGR-201ENST00000318842 CFDP1Q9UEE9 299 aaPredicted RBP12.81□□□□□ -0.36
RPGR-201ENST00000318842 DAPK1P53355 1430 aa12.81□□□□□ -0.36
RPGR-201ENST00000318842 EPRSP07814 1512 aaKnown RBP12.81□□□□□ -0.36
RPGR-201ENST00000318842 BACH2Q9BYV9 841 aa12.81□□□□□ -0.36
RPGR-201ENST00000318842 EHBP1L1Q8N3D4 1523 aa12.81□□□□□ -0.36
RPGR-201ENST00000318842 HECW1Q76N89 1606 aa12.8□□□□□ -0.36
RPGR-201ENST00000318842 PRG4Q92954 1404 aaPredicted RBP12.8□□□□□ -0.36
RPGR-201ENST00000318842 CC2D2AQ9P2K1 1620 aa12.79□□□□□ -0.36
RPGR-201ENST00000318842 DNMBPQ6XZF7 1577 aa12.78□□□□□ -0.36
RPGR-201ENST00000318842 FRAT1Q92837 279 aaPredicted RBP12.77□□□□□ -0.37
RPGR-201ENST00000318842 SLC24A1O60721 1099 aa12.77□□□□□ -0.37
RPGR-201ENST00000318842 PZPP20742 1482 aa12.76□□□□□ -0.37
RPGR-201ENST00000318842 CCDC146Q8IYE0 955 aa12.76□□□□□ -0.37
RPGR-201ENST00000318842 PRDM2Q13029 1718 aa12.76□□□□□ -0.37
RPGR-201ENST00000318842 NUP155O75694 1391 aa12.75□□□□□ -0.37
RPGR-201ENST00000318842 SAMD9Q5K651 1589 aa12.75□□□□□ -0.37
RPGR-201ENST00000318842 FRAT2O75474 233 aaPredicted RBP12.75□□□□□ -0.37
RPGR-201ENST00000318842 HNRNPMP52272 730 aaKnown RBP eCLIP12.75□□□□□ -0.37
RPGR-201ENST00000318842 NFKBIBQ15653 356 aa12.75□□□□□ -0.37
RPGR-201ENST00000318842 GCC2Q8IWJ2 1684 aa12.75□□□□□ -0.37
RPGR-201ENST00000318842 MYT1LQ9UL68 1186 aa12.74□□□□□ -0.37
RPGR-201ENST00000318842 SENP3Q9H4L4 574 aaPredicted RBP12.74□□□□□ -0.37
RPGR-201ENST00000318842 MYBBP1AQ9BQG0 1328 aaKnown RBP12.74□□□□□ -0.37
RPGR-201ENST00000318842 LAMC3Q9Y6N6 1575 aa12.74□□□□□ -0.37
RPGR-201ENST00000318842 ARHGEF11O15085 1522 aa12.73□□□□□ -0.37
RPGR-201ENST00000318842 TCOF1Q13428 1488 aaKnown RBP12.72□□□□□ -0.37
RPGR-201ENST00000318842 TCERG1O14776 1098 aaKnown RBP12.72□□□□□ -0.37
RPGR-201ENST00000318842 SPRYD3Q8NCJ5 442 aa12.72□□□□□ -0.37
RPGR-201ENST00000318842 PANK3Q9H999 370 aa12.72□□□□□ -0.37
RPGR-201ENST00000318842 ADAMTS8Q9UP79 889 aa12.72□□□□□ -0.37
RPGR-201ENST00000318842 ROCK2O75116 1388 aaKnown RBP12.71□□□□□ -0.37
RPGR-201ENST00000318842 CUL7Q14999 1698 aa12.7□□□□□ -0.38
RPGR-201ENST00000318842 KIF15Q9NS87 1388 aa12.7□□□□□ -0.38
RPGR-201ENST00000318842 SPINK5Q9NQ38 1064 aaPredicted RBP12.69□□□□□ -0.38
RPGR-201ENST00000318842 SLKQ9H2G2 1235 aaPredicted RBP12.68□□□□□ -0.38
RPGR-201ENST00000318842 LRPPRCP42704 1394 aaKnown RBP12.68□□□□□ -0.38
RPGR-201ENST00000318842 DISP3Q9P2K9 1392 aa12.68□□□□□ -0.38
RPGR-201ENST00000318842 DAXXQ9UER7 740 aaPredicted RBP12.67□□□□□ -0.38
RPGR-201ENST00000318842 BCAR3O75815 825 aa12.67□□□□□ -0.38
RPGR-201ENST00000318842 SEC24BO95487 1268 aa12.67□□□□□ -0.38
RPGR-201ENST00000318842 GSE1Q14687 1217 aa12.67□□□□□ -0.38
RPGR-201ENST00000318842 DMRT2Q9Y5R5 561 aa12.67□□□□□ -0.38
RPGR-201ENST00000318842 PLB1Q6P1J6 1458 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms