RNA–Protein interactions for RNA: ENST00000318220.10

NBPF3-201, Transcript of NBPF member 3, humanhuman

TSL 2

Gene NBPF3, Length 4,401 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3-201ENST00000318220 CC2D1BQ5T0F9 858 aaKnown RBP17.66■□□□□ 0.42
NBPF3-201ENST00000318220 TRAK1Q9UPV9 953 aa17.66■□□□□ 0.42
NBPF3-201ENST00000318220 MEX3CQ5U5Q3 659 aaKnown RBP17.66■□□□□ 0.42
NBPF3-201ENST00000318220 LTV1Q96GA3 475 aaPredicted RBP17.65■□□□□ 0.42
NBPF3-201ENST00000318220 GRIN2BQ13224 1484 aa17.65■□□□□ 0.42
NBPF3-201ENST00000318220 ZNF644Q9H582 1327 aaPredicted RBP17.64■□□□□ 0.41
NBPF3-201ENST00000318220 ARHGAP35Q9NRY4 1499 aa17.64■□□□□ 0.41
NBPF3-201ENST00000318220 MPHOSPH9Q99550 1183 aa17.61■□□□□ 0.41
NBPF3-201ENST00000318220 ACIN1Q9UKV3 1341 aaKnown RBP17.61■□□□□ 0.41
NBPF3-201ENST00000318220 NUDCQ9Y266 331 aa17.61■□□□□ 0.41
NBPF3-201ENST00000318220 CCDC18Q5T9S5 1454 aa17.6■□□□□ 0.41
NBPF3-201ENST00000318220 PIP4K2BP78356 416 aa17.6■□□□□ 0.41
NBPF3-201ENST00000318220 MAPK8IP3Q9UPT6 1336 aa17.6■□□□□ 0.41
NBPF3-201ENST00000318220 TMF1P82094 1093 aa17.59■□□□□ 0.41
NBPF3-201ENST00000318220 VPS8Q8N3P4 1428 aa17.59■□□□□ 0.41
NBPF3-201ENST00000318220 HDGFL2Q7Z4V5 671 aaPredicted RBP17.58■□□□□ 0.41
NBPF3-201ENST00000318220 CFTRP13569 1480 aa17.57■□□□□ 0.4
NBPF3-201ENST00000318220 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.55■□□□□ 0.4
NBPF3-201ENST00000318220 IFT140Q96RY7 1462 aa17.54■□□□□ 0.4
NBPF3-201ENST00000318220 ATF3P18847 181 aa17.54■□□□□ 0.4
NBPF3-201ENST00000318220 EVA1CP58658 441 aa17.54■□□□□ 0.4
NBPF3-201ENST00000318220 MORC1Q86VD1 984 aa17.53■□□□□ 0.4
NBPF3-201ENST00000318220 TXNDC2Q86VQ3 553 aa17.52■□□□□ 0.39
NBPF3-201ENST00000318220 SNAPC4Q5SXM2 1469 aa17.52■□□□□ 0.39
NBPF3-201ENST00000318220 MSH5O43196 834 aa17.51■□□□□ 0.39
NBPF3-201ENST00000318220 PROSER2Q86WR7 435 aaPredicted RBP17.51■□□□□ 0.39
NBPF3-201ENST00000318220 MINK1Q8N4C8 1332 aaPredicted RBP17.5■□□□□ 0.39
NBPF3-201ENST00000318220 VGFO15240 615 aaPredicted RBP17.5■□□□□ 0.39
NBPF3-201ENST00000318220 TOPBP1Q92547 1522 aa17.49■□□□□ 0.39
NBPF3-201ENST00000318220 AMPHP49418 695 aa17.48■□□□□ 0.39
NBPF3-201ENST00000318220 USP35Q9P2H5 1018 aa17.47■□□□□ 0.39
NBPF3-201ENST00000318220 POLA1P09884 1462 aaPredicted RBP17.47■□□□□ 0.39
NBPF3-201ENST00000318220 NUTM2BA6NNL0 878 aaPredicted RBP17.47■□□□□ 0.39
NBPF3-201ENST00000318220 NUTM2EB1AL46 878 aaPredicted RBP17.47■□□□□ 0.39
NBPF3-201ENST00000318220 NUTM2AQ8IVF1 878 aaPredicted RBP17.47■□□□□ 0.39
NBPF3-201ENST00000318220 PSME1Q06323 249 aa17.46■□□□□ 0.39
NBPF3-201ENST00000318220 SLC26A8Q96RN1 970 aa17.46■□□□□ 0.39
NBPF3-201ENST00000318220 KLHL34Q8N239 644 aa17.46■□□□□ 0.38
NBPF3-201ENST00000318220 CEBPAP49715 358 aaPredicted RBP17.45■□□□□ 0.38
NBPF3-201ENST00000318220 SYTL4Q96C24 671 aaPredicted RBP17.44■□□□□ 0.38
NBPF3-201ENST00000318220 RTF1Q92541 710 aaKnown RBP17.43■□□□□ 0.38
NBPF3-201ENST00000318220 SCAPERQ9BY12 1400 aa17.42■□□□□ 0.38
NBPF3-201ENST00000318220 BICRAQ9NZM4 1560 aa17.42■□□□□ 0.38
NBPF3-201ENST00000318220 NUTM2GQ5VZR2 741 aa17.41■□□□□ 0.38
NBPF3-201ENST00000318220 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.41■□□□□ 0.38
NBPF3-201ENST00000318220 ROCK2O75116 1388 aaKnown RBP17.4■□□□□ 0.38
NBPF3-201ENST00000318220 MYH16Q9H6N6 1097 aa17.4■□□□□ 0.38
NBPF3-201ENST00000318220 GTF3C3Q9Y5Q9 886 aa17.4■□□□□ 0.38
NBPF3-201ENST00000318220 SETD5Q9C0A6 1442 aa17.4■□□□□ 0.38
NBPF3-201ENST00000318220 L3MBTL2Q969R5 705 aa17.4■□□□□ 0.38
NBPF3-201ENST00000318220 THEMISQ8N1K5 641 aaPredicted RBP17.39■□□□□ 0.38
NBPF3-201ENST00000318220 TERF2IPQ9NYB0 399 aa17.39■□□□□ 0.38
NBPF3-201ENST00000318220 U2AF1L5P0DN76 240 aaPredicted RBP17.38■□□□□ 0.37
NBPF3-201ENST00000318220 U2AF1Q01081 240 aaKnown RBP eCLIP17.38■□□□□ 0.37
NBPF3-201ENST00000318220 TMEM132EQ6IEE7 984 aa17.37■□□□□ 0.37
NBPF3-201ENST00000318220 SYNJ2O15056 1496 aa17.35■□□□□ 0.37
NBPF3-201ENST00000318220 RBM33Q96EV2 1170 aaKnown RBP17.35■□□□□ 0.37
NBPF3-201ENST00000318220 IRX6P78412 446 aaPredicted RBP17.35■□□□□ 0.37
NBPF3-201ENST00000318220 ANKLE2Q86XL3 938 aa17.35■□□□□ 0.37
NBPF3-201ENST00000318220 RAB3GAP2Q9H2M9 1393 aa17.35■□□□□ 0.37
NBPF3-201ENST00000318220 GTF2E1P29083 439 aaPredicted RBP17.34■□□□□ 0.37
NBPF3-201ENST00000318220 FRAT1Q92837 279 aaPredicted RBP17.34■□□□□ 0.37
NBPF3-201ENST00000318220 GOLGA2Q08379 1002 aa17.33■□□□□ 0.37
NBPF3-201ENST00000318220 PRDM2Q13029 1718 aa17.33■□□□□ 0.37
NBPF3-201ENST00000318220 ZNF608Q9ULD9 1512 aaPredicted RBP17.33■□□□□ 0.36
NBPF3-201ENST00000318220 KIF15Q9NS87 1388 aa17.33■□□□□ 0.36
NBPF3-201ENST00000318220 ESCO1Q5FWF5 840 aa17.32■□□□□ 0.36
NBPF3-201ENST00000318220 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.32■□□□□ 0.36
NBPF3-201ENST00000318220 HMGXB3Q12766 1538 aa17.32■□□□□ 0.36
NBPF3-201ENST00000318220 CCDC144AA2RUR9 1427 aa17.31■□□□□ 0.36
NBPF3-201ENST00000318220 HSPA5P11021 654 aaKnown RBP17.31■□□□□ 0.36
NBPF3-201ENST00000318220 HSP90AA1P07900 732 aaKnown RBP17.3■□□□□ 0.36
NBPF3-201ENST00000318220 TAOK2Q9UL54 1235 aa17.3■□□□□ 0.36
NBPF3-201ENST00000318220 OS9Q13438 667 aaPredicted RBP17.28■□□□□ 0.36
NBPF3-201ENST00000318220 FTSJ3Q8IY81 847 aaKnown RBP17.28■□□□□ 0.36
NBPF3-201ENST00000318220 PMFBP1Q8TBY8 1022 aa17.28■□□□□ 0.36
NBPF3-201ENST00000318220 ARHGAP5Q13017 1502 aa17.27■□□□□ 0.36
NBPF3-201ENST00000318220 CD109Q6YHK3 1445 aa17.26■□□□□ 0.35
NBPF3-201ENST00000318220 STRN4Q9NRL3 753 aa17.26■□□□□ 0.35
NBPF3-201ENST00000318220 FKBP8Q14318 412 aa17.26■□□□□ 0.35
NBPF3-201ENST00000318220 MIER1Q8N108 512 aa17.26■□□□□ 0.35
NBPF3-201ENST00000318220 HSPA2P54652 639 aa17.25■□□□□ 0.35
NBPF3-201ENST00000318220 TMX4Q9H1E5 349 aaPredicted RBP17.25■□□□□ 0.35
NBPF3-201ENST00000318220 XPCQ01831 940 aaPredicted RBP17.25■□□□□ 0.35
NBPF3-201ENST00000318220 ST20-MTHFSA0A0A6YYL1 179 aa17.24■□□□□ 0.35
NBPF3-201ENST00000318220 NLRP2Q9NX02 1062 aa17.24■□□□□ 0.35
NBPF3-201ENST00000318220 POGZQ7Z3K3 1410 aa17.24■□□□□ 0.35
NBPF3-201ENST00000318220 PNNQ9H307 717 aaKnown RBP17.24■□□□□ 0.35
NBPF3-201ENST00000318220 CCDC136Q96JN2 1154 aa17.23■□□□□ 0.35
NBPF3-201ENST00000318220 PPP1R1BQ9UD71 204 aaPredicted RBP17.23■□□□□ 0.35
NBPF3-201ENST00000318220 COG3Q96JB2 828 aa17.23■□□□□ 0.35
NBPF3-201ENST00000318220 UACAQ9BZF9 1416 aa17.23■□□□□ 0.35
NBPF3-201ENST00000318220 NLRP6P59044 892 aa17.22■□□□□ 0.35
NBPF3-201ENST00000318220 LAMC3Q9Y6N6 1575 aa17.2■□□□□ 0.34
NBPF3-201ENST00000318220 SF3B2Q13435 895 aaKnown RBP17.2■□□□□ 0.34
NBPF3-201ENST00000318220 CUX1P39880 1505 aa17.19■□□□□ 0.34
NBPF3-201ENST00000318220 MYOM3Q5VTT5 1437 aa17.19■□□□□ 0.34
NBPF3-201ENST00000318220 NGEFQ8N5V2 710 aa17.19■□□□□ 0.34
NBPF3-201ENST00000318220 ISY1Q9ULR0 285 aaKnown RBP17.19■□□□□ 0.34
NBPF3-201ENST00000318220 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms