RNA–Protein interactions for RNA: ENST00000316509.10

VAMP2-201, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP2, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-201ENST00000316509 KIF14Q15058 1648 aa20.06■□□□□ 0.8
VAMP2-201ENST00000316509 PPP1R15AO75807 674 aaPredicted RBP20.06■□□□□ 0.8
VAMP2-201ENST00000316509 ABCC10Q5T3U5 1492 aa20.05■□□□□ 0.8
VAMP2-201ENST00000316509 CAMSAP2Q08AD1 1489 aa20.05■□□□□ 0.8
VAMP2-201ENST00000316509 CLASP1Q7Z460 1538 aa20.04■□□□□ 0.8
VAMP2-201ENST00000316509 ADGRL2O95490 1459 aa20.02■□□□□ 0.79
VAMP2-201ENST00000316509 TONSLQ96HA7 1378 aa20.01■□□□□ 0.79
VAMP2-201ENST00000316509 ZNF644Q9H582 1327 aaPredicted RBP20.01■□□□□ 0.79
VAMP2-201ENST00000316509 TRIM52Q96A61 297 aa19.99■□□□□ 0.79
VAMP2-201ENST00000316509 CENPBP07199 599 aaPredicted RBP19.98■□□□□ 0.79
VAMP2-201ENST00000316509 MPHOSPH9Q99550 1183 aa19.98■□□□□ 0.79
VAMP2-201ENST00000316509 SHANK2Q9UPX8 1470 aa19.96■□□□□ 0.79
VAMP2-201ENST00000316509 NCOA1Q15788 1441 aa19.96■□□□□ 0.79
VAMP2-201ENST00000316509 RSPH4AQ5TD94 716 aa19.96■□□□□ 0.79
VAMP2-201ENST00000316509 ADGBQ8N7X0 1667 aa19.96■□□□□ 0.79
VAMP2-201ENST00000316509 ANKRD30AQ9BXX3 1397 aa19.95■□□□□ 0.78
VAMP2-201ENST00000316509 MIER1Q8N108 512 aa19.95■□□□□ 0.78
VAMP2-201ENST00000316509 ABCC2Q92887 1545 aa19.95■□□□□ 0.78
VAMP2-201ENST00000316509 CDC42BPAQ5VT25 1732 aa19.95■□□□□ 0.78
VAMP2-201ENST00000316509 KDM6BO15054 1643 aa19.94■□□□□ 0.78
VAMP2-201ENST00000316509 UHRF1BP1LA0JNW5 1464 aa19.93■□□□□ 0.78
VAMP2-201ENST00000316509 CROCC2H7BZ55 1655 aa19.93■□□□□ 0.78
VAMP2-201ENST00000316509 DENND4BO75064 1496 aaPredicted RBP19.91■□□□□ 0.78
VAMP2-201ENST00000316509 ZNF777Q9ULD5 760 aaPredicted RBP19.91■□□□□ 0.78
VAMP2-201ENST00000316509 ARHGEF5Q12774 1597 aa19.91■□□□□ 0.78
VAMP2-201ENST00000316509 TSPY4P0CV99 314 aa19.88■□□□□ 0.77
VAMP2-201ENST00000316509 TSPY10P0CW01 314 aa19.88■□□□□ 0.77
VAMP2-201ENST00000316509 ANKRD30BQ9BXX2 1392 aa19.86■□□□□ 0.77
VAMP2-201ENST00000316509 PREX2Q70Z35 1606 aa19.85■□□□□ 0.77
VAMP2-201ENST00000316509 ERCC6L2Q5T890 1561 aa19.85■□□□□ 0.77
VAMP2-201ENST00000316509 C9orf84Q5VXU9 1444 aa19.84■□□□□ 0.77
VAMP2-201ENST00000316509 PLEKHH2Q8IVE3 1493 aa19.83■□□□□ 0.77
VAMP2-201ENST00000316509 MBD5Q9P267 1494 aa19.83■□□□□ 0.77
VAMP2-201ENST00000316509 SLC4A1APQ9BWU0 796 aaKnown RBP19.83■□□□□ 0.77
VAMP2-201ENST00000316509 ANKRD50Q9ULJ7 1429 aa19.83■□□□□ 0.76
VAMP2-201ENST00000316509 KDM5BQ9UGL1 1544 aa19.82■□□□□ 0.76
VAMP2-201ENST00000316509 RPRD2Q5VT52 1461 aaKnown RBP19.81■□□□□ 0.76
VAMP2-201ENST00000316509 KIAA1107Q9UPP5 1409 aa19.81■□□□□ 0.76
VAMP2-201ENST00000316509 CCDC141Q6ZP82 1450 aa19.8■□□□□ 0.76
VAMP2-201ENST00000316509 PZPP20742 1482 aa19.8■□□□□ 0.76
VAMP2-201ENST00000316509 CDC42BPBQ9Y5S2 1711 aa19.79■□□□□ 0.76
VAMP2-201ENST00000316509 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.79■□□□□ 0.76
VAMP2-201ENST00000316509 SAMD9LQ8IVG5 1584 aa19.78■□□□□ 0.76
VAMP2-201ENST00000316509 MAST1Q9Y2H9 1570 aa19.76■□□□□ 0.75
VAMP2-201ENST00000316509 KDM5DQ9BY66 1539 aa19.76■□□□□ 0.75
VAMP2-201ENST00000316509 HNRNPMP52272 730 aaKnown RBP eCLIP19.76■□□□□ 0.75
VAMP2-201ENST00000316509 ZCCHC11Q5TAX3 1644 aaKnown RBP19.75■□□□□ 0.75
VAMP2-201ENST00000316509 PLCH2O75038 1416 aa19.74■□□□□ 0.75
VAMP2-201ENST00000316509 ARHGAP5Q13017 1502 aa19.74■□□□□ 0.75
VAMP2-201ENST00000316509 MYO5CQ9NQX4 1742 aa19.73■□□□□ 0.75
VAMP2-201ENST00000316509 TTC37Q6PGP7 1564 aa19.73■□□□□ 0.75
VAMP2-201ENST00000316509 KIF15Q9NS87 1388 aa19.73■□□□□ 0.75
VAMP2-201ENST00000316509 OSCARQ8IYS5 282 aa19.72■□□□□ 0.75
VAMP2-201ENST00000316509 L3MBTL2Q969R5 705 aa19.72■□□□□ 0.75
VAMP2-201ENST00000316509 EFCAB2Q5VUJ9 269 aa19.71■□□□□ 0.75
VAMP2-201ENST00000316509 ARAP3Q8WWN8 1544 aa19.71■□□□□ 0.75
VAMP2-201ENST00000316509 FOXD1Q16676 465 aa19.68■□□□□ 0.74
VAMP2-201ENST00000316509 NUP155O75694 1391 aa19.68■□□□□ 0.74
VAMP2-201ENST00000316509 TEX14Q8IWB6 1497 aa19.68■□□□□ 0.74
VAMP2-201ENST00000316509 PKD2Q13563 968 aa19.67■□□□□ 0.74
VAMP2-201ENST00000316509 SCAF1Q9H7N4 1312 aaKnown RBP19.66■□□□□ 0.74
VAMP2-201ENST00000316509 DDX10Q13206 875 aaKnown RBP19.66■□□□□ 0.74
VAMP2-201ENST00000316509 SYCP2Q9BX26 1530 aa19.66■□□□□ 0.74
VAMP2-201ENST00000316509 EIF4G2P78344 907 aaKnown RBP eCLIP19.66■□□□□ 0.74
VAMP2-201ENST00000316509 KCNH8Q96L42 1107 aa19.66■□□□□ 0.74
VAMP2-201ENST00000316509 PLXNC1O60486 1568 aa19.65■□□□□ 0.74
VAMP2-201ENST00000316509 YTHDC1Q96MU7 727 aaKnown RBP19.61■□□□□ 0.73
VAMP2-201ENST00000316509 WDR7Q9Y4E6 1490 aa19.61■□□□□ 0.73
VAMP2-201ENST00000316509 DUOX2Q9NRD8 1548 aa19.6■□□□□ 0.73
VAMP2-201ENST00000316509 CCER2I3L3R5 266 aa19.59■□□□□ 0.73
VAMP2-201ENST00000316509 HSPA5P11021 654 aaKnown RBP19.59■□□□□ 0.73
VAMP2-201ENST00000316509 RTEL1-TNFRSF6BF6WH68 1400 aa19.58■□□□□ 0.73
VAMP2-201ENST00000316509 ABCC1P33527 1531 aa19.58■□□□□ 0.72
VAMP2-201ENST00000316509 ERBINQ96RT1 1412 aa19.58■□□□□ 0.72
VAMP2-201ENST00000316509 UNC13BO14795 1591 aa19.58■□□□□ 0.72
VAMP2-201ENST00000316509 ANP32CO43423 234 aa19.57■□□□□ 0.72
VAMP2-201ENST00000316509 ARHGEF12Q9NZN5 1544 aa19.57■□□□□ 0.72
VAMP2-201ENST00000316509 HIRIP3Q9BW71 556 aaPredicted RBP19.56■□□□□ 0.72
VAMP2-201ENST00000316509 FAM135AQ9P2D6 1515 aa19.55■□□□□ 0.72
VAMP2-201ENST00000316509 NBPF8Q3BBV2 869 aa19.55■□□□□ 0.72
VAMP2-201ENST00000316509 UHRF1BP1Q6BDS2 1440 aa19.55■□□□□ 0.72
VAMP2-201ENST00000316509 ABCA9Q8IUA7 1624 aa19.53■□□□□ 0.72
VAMP2-201ENST00000316509 SPATA31E1Q6ZUB1 1445 aa19.51■□□□□ 0.71
VAMP2-201ENST00000316509 MAGI2Q86UL8 1455 aa19.5■□□□□ 0.71
VAMP2-201ENST00000316509 NPM1P06748 294 aaKnown RBP eCLIP19.5■□□□□ 0.71
VAMP2-201ENST00000316509 IQGAP3Q86VI3 1631 aa19.49■□□□□ 0.71
VAMP2-201ENST00000316509 GTF3C3Q9Y5Q9 886 aa19.49■□□□□ 0.71
VAMP2-201ENST00000316509 TRAPPC8Q9Y2L5 1435 aa19.49■□□□□ 0.71
VAMP2-201ENST00000316509 SPAG9O60271 1321 aaKnown RBP19.48■□□□□ 0.71
VAMP2-201ENST00000316509 ASXL2Q76L83 1435 aa19.47■□□□□ 0.71
VAMP2-201ENST00000316509 WASHC2AQ641Q2 1341 aa19.47■□□□□ 0.71
VAMP2-201ENST00000316509 ATP10AO60312 1499 aa19.47■□□□□ 0.71
VAMP2-201ENST00000316509 FANCAO15360 1455 aa19.45■□□□□ 0.7
VAMP2-201ENST00000316509 ARID4BQ4LE39 1312 aaPredicted RBP19.45■□□□□ 0.7
VAMP2-201ENST00000316509 CCDC7Q96M83 1385 aa19.44■□□□□ 0.7
VAMP2-201ENST00000316509 RALGAPBQ86X10 1494 aa19.44■□□□□ 0.7
VAMP2-201ENST00000316509 CCDC144AA2RUR9 1427 aa19.43■□□□□ 0.7
VAMP2-201ENST00000316509 ZFYVE16Q7Z3T8 1539 aa19.41■□□□□ 0.7
VAMP2-201ENST00000316509 CNTLNQ9NXG0 1405 aa19.41■□□□□ 0.7
VAMP2-201ENST00000316509 AFAP1Q8N556 730 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms