RNA–Protein interactions for RNA: ENST00000316308.8

CLK4-201, Transcript of CDC like kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK4, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-201ENST00000316308 DAPK1P53355 1430 aa21.07■□□□□ 0.96
CLK4-201ENST00000316308 KIF14Q15058 1648 aa21.04■□□□□ 0.96
CLK4-201ENST00000316308 NUP160Q12769 1436 aa21.03■□□□□ 0.96
CLK4-201ENST00000316308 CDK11AQ9UQ88 783 aaPredicted RBP21.01■□□□□ 0.95
CLK4-201ENST00000316308 CFDP1Q9UEE9 299 aaPredicted RBP21■□□□□ 0.95
CLK4-201ENST00000316308 TROQ12816 1431 aaPredicted RBP21■□□□□ 0.95
CLK4-201ENST00000316308 AKNAQ7Z591 1439 aa20.98■□□□□ 0.95
CLK4-201ENST00000316308 DNMT1P26358 1616 aaKnown RBP20.98■□□□□ 0.95
CLK4-201ENST00000316308 L3MBTL2Q969R5 705 aa20.97■□□□□ 0.95
CLK4-201ENST00000316308 GPATCH8Q9UKJ3 1502 aaKnown RBP20.97■□□□□ 0.95
CLK4-201ENST00000316308 CAMSAP2Q08AD1 1489 aa20.96■□□□□ 0.95
CLK4-201ENST00000316308 CARMIL2Q6F5E8 1435 aa20.95■□□□□ 0.94
CLK4-201ENST00000316308 SLC4A1APQ9BWU0 796 aaKnown RBP20.92■□□□□ 0.94
CLK4-201ENST00000316308 HSPA5P11021 654 aaKnown RBP20.92■□□□□ 0.94
CLK4-201ENST00000316308 ROCK1Q13464 1354 aa20.91■□□□□ 0.94
CLK4-201ENST00000316308 ATP10BO94823 1461 aa20.91■□□□□ 0.94
CLK4-201ENST00000316308 ANKRD30BQ9BXX2 1392 aa20.9■□□□□ 0.94
CLK4-201ENST00000316308 NBPF8Q3BBV2 869 aa20.9■□□□□ 0.94
CLK4-201ENST00000316308 PLEKHD1A6NEE1 506 aa20.88■□□□□ 0.93
CLK4-201ENST00000316308 NCOA1Q15788 1441 aa20.88■□□□□ 0.93
CLK4-201ENST00000316308 ABCA8O94911 1581 aa20.87■□□□□ 0.93
CLK4-201ENST00000316308 C11orf95C9JLR9 678 aaPredicted RBP20.87■□□□□ 0.93
CLK4-201ENST00000316308 WASHC2AQ641Q2 1341 aa20.86■□□□□ 0.93
CLK4-201ENST00000316308 ANP32CO43423 234 aa20.84■□□□□ 0.93
CLK4-201ENST00000316308 PZPP20742 1482 aa20.84■□□□□ 0.93
CLK4-201ENST00000316308 SUPT16HQ9Y5B9 1047 aaKnown RBP20.83■□□□□ 0.93
CLK4-201ENST00000316308 HNRNPMP52272 730 aaKnown RBP eCLIP20.82■□□□□ 0.92
CLK4-201ENST00000316308 ADCY10Q96PN6 1610 aa20.82■□□□□ 0.92
CLK4-201ENST00000316308 ABCC10Q5T3U5 1492 aa20.81■□□□□ 0.92
CLK4-201ENST00000316308 CDC42BPAQ5VT25 1732 aa20.81■□□□□ 0.92
CLK4-201ENST00000316308 RPRD2Q5VT52 1461 aaKnown RBP20.8■□□□□ 0.92
CLK4-201ENST00000316308 PTPRGP23470 1445 aa20.8■□□□□ 0.92
CLK4-201ENST00000316308 ITSN2Q9NZM3 1697 aa20.8■□□□□ 0.92
CLK4-201ENST00000316308 TEX14Q8IWB6 1497 aa20.79■□□□□ 0.92
CLK4-201ENST00000316308 CHD1O14646 1710 aa20.78■□□□□ 0.92
CLK4-201ENST00000316308 ERCC6L2Q5T890 1561 aa20.78■□□□□ 0.92
CLK4-201ENST00000316308 EIF4G2P78344 907 aaKnown RBP eCLIP20.77■□□□□ 0.92
CLK4-201ENST00000316308 PKD2Q13563 968 aa20.77■□□□□ 0.92
CLK4-201ENST00000316308 CROCC2H7BZ55 1655 aa20.74■□□□□ 0.91
CLK4-201ENST00000316308 ZNF326Q5BKZ1 582 aaKnown RBP20.74■□□□□ 0.91
CLK4-201ENST00000316308 ANKRD50Q9ULJ7 1429 aa20.73■□□□□ 0.91
CLK4-201ENST00000316308 ADGBQ8N7X0 1667 aa20.72■□□□□ 0.91
CLK4-201ENST00000316308 CCER2I3L3R5 266 aa20.72■□□□□ 0.91
CLK4-201ENST00000316308 CCDC184Q52MB2 194 aa20.72■□□□□ 0.91
CLK4-201ENST00000316308 ANKRD30AQ9BXX3 1397 aa20.72■□□□□ 0.91
CLK4-201ENST00000316308 ADGRL2O95490 1459 aa20.72■□□□□ 0.91
CLK4-201ENST00000316308 C9orf84Q5VXU9 1444 aa20.71■□□□□ 0.91
CLK4-201ENST00000316308 NUP155O75694 1391 aa20.68■□□□□ 0.9
CLK4-201ENST00000316308 BCANQ96GW7 911 aa20.68■□□□□ 0.9
CLK4-201ENST00000316308 PELP1Q8IZL8 1130 aaKnown RBP20.67■□□□□ 0.9
CLK4-201ENST00000316308 KIAA1107Q9UPP5 1409 aa20.67■□□□□ 0.9
CLK4-201ENST00000316308 MBD5Q9P267 1494 aa20.66■□□□□ 0.9
CLK4-201ENST00000316308 TSPY4P0CV99 314 aa20.66■□□□□ 0.9
CLK4-201ENST00000316308 TSPY10P0CW01 314 aa20.66■□□□□ 0.9
CLK4-201ENST00000316308 CDC42BPBQ9Y5S2 1711 aa20.64■□□□□ 0.89
CLK4-201ENST00000316308 CCDC7Q96M83 1385 aa20.64■□□□□ 0.89
CLK4-201ENST00000316308 CNGB1Q14028 1251 aaPredicted RBP20.64■□□□□ 0.89
CLK4-201ENST00000316308 SAMD9LQ8IVG5 1584 aa20.63■□□□□ 0.89
CLK4-201ENST00000316308 KIF15Q9NS87 1388 aa20.63■□□□□ 0.89
CLK4-201ENST00000316308 SPATA31E1Q6ZUB1 1445 aa20.63■□□□□ 0.89
CLK4-201ENST00000316308 KIF7Q2M1P5 1343 aa20.62■□□□□ 0.89
CLK4-201ENST00000316308 TTC37Q6PGP7 1564 aa20.61■□□□□ 0.89
CLK4-201ENST00000316308 FKBP8Q14318 412 aa20.59■□□□□ 0.89
CLK4-201ENST00000316308 KDM2AQ9Y2K7 1162 aa20.59■□□□□ 0.89
CLK4-201ENST00000316308 CNTLNQ9NXG0 1405 aa20.59■□□□□ 0.89
CLK4-201ENST00000316308 POLR3GLQ9BT43 218 aa20.58■□□□□ 0.89
CLK4-201ENST00000316308 SHROOM2Q13796 1616 aa20.57■□□□□ 0.88
CLK4-201ENST00000316308 SHANK2Q9UPX8 1470 aa20.57■□□□□ 0.88
CLK4-201ENST00000316308 SYCP2Q9BX26 1530 aa20.56■□□□□ 0.88
CLK4-201ENST00000316308 HNRNPUQ00839 825 aaKnown RBP eCLIP20.56■□□□□ 0.88
CLK4-201ENST00000316308 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.56■□□□□ 0.88
CLK4-201ENST00000316308 PREX2Q70Z35 1606 aa20.54■□□□□ 0.88
CLK4-201ENST00000316308 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.54■□□□□ 0.883e-8■■■■□ 20.2
CLK4-201ENST00000316308 PRKRIP1Q9H875 184 aaPredicted RBP20.54■□□□□ 0.88
CLK4-201ENST00000316308 CCDC141Q6ZP82 1450 aa20.53■□□□□ 0.88
CLK4-201ENST00000316308 ARHGAP5Q13017 1502 aa20.52■□□□□ 0.88
CLK4-201ENST00000316308 BCORL1Q5H9F3 1711 aa20.52■□□□□ 0.88
CLK4-201ENST00000316308 ARHGEF5Q12774 1597 aa20.51■□□□□ 0.87
CLK4-201ENST00000316308 USP47Q96K76 1375 aa20.51■□□□□ 0.87
CLK4-201ENST00000316308 ARHGEF12Q9NZN5 1544 aa20.5■□□□□ 0.87
CLK4-201ENST00000316308 DCAF11Q8TEB1 546 aa20.5■□□□□ 0.87
CLK4-201ENST00000316308 ABCC2Q92887 1545 aa20.5■□□□□ 0.87
CLK4-201ENST00000316308 FAM9BQ8IZU0 186 aa20.49■□□□□ 0.87
CLK4-201ENST00000316308 SENP3-EIF4A1A0A087X0R7 540 aa20.47■□□□□ 0.87
CLK4-201ENST00000316308 RGL3Q3MIN7 710 aa20.47■□□□□ 0.87
CLK4-201ENST00000316308 FAM135AQ9P2D6 1515 aa20.46■□□□□ 0.87
CLK4-201ENST00000316308 KDM5DQ9BY66 1539 aa20.45■□□□□ 0.86
CLK4-201ENST00000316308 PLEKHH2Q8IVE3 1493 aa20.45■□□□□ 0.86
CLK4-201ENST00000316308 IRX6P78412 446 aaPredicted RBP20.44■□□□□ 0.86
CLK4-201ENST00000316308 CARD11Q9BXL7 1154 aa20.44■□□□□ 0.86
CLK4-201ENST00000316308 MRS2Q9HD23 443 aa20.44■□□□□ 0.86
CLK4-201ENST00000316308 KDM5CP41229 1560 aa20.43■□□□□ 0.86
CLK4-201ENST00000316308 ST20-MTHFSA0A0A6YYL1 179 aa20.41■□□□□ 0.86
CLK4-201ENST00000316308 PLA2R1Q13018 1463 aa20.41■□□□□ 0.86
CLK4-201ENST00000316308 CLASP1Q7Z460 1538 aa20.41■□□□□ 0.86
CLK4-201ENST00000316308 ZCCHC11Q5TAX3 1644 aaKnown RBP20.4■□□□□ 0.86
CLK4-201ENST00000316308 DHX29Q7Z478 1369 aaKnown RBP20.4■□□□□ 0.86
CLK4-201ENST00000316308 NBPF1Q3BBV0 1214 aa20.39■□□□□ 0.85
CLK4-201ENST00000316308 MYO5CQ9NQX4 1742 aa20.39■□□□□ 0.85
CLK4-201ENST00000316308 UHRF1BP1Q6BDS2 1440 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms