RNA–Protein interactions for RNA: ENST00000315994.6

SH3PXD2A-201, Transcript of SH3 and PX domains 2A, humanhuman

TSL 1 (best)

Gene SH3PXD2A, Length 5,504 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-201ENST00000315994 SRPK2P78362 688 aaKnown RBP16.8■□□□□ 0.28
SH3PXD2A-201ENST00000315994 GRIN2BQ13224 1484 aa16.8■□□□□ 0.28
SH3PXD2A-201ENST00000315994 TNNT2P45379 298 aaPredicted RBP16.8■□□□□ 0.28
SH3PXD2A-201ENST00000315994 PNNQ9H307 717 aaKnown RBP16.79■□□□□ 0.28
SH3PXD2A-201ENST00000315994 MRC2Q9UBG0 1479 aa16.79■□□□□ 0.28
SH3PXD2A-201ENST00000315994 OSCARQ8IYS5 282 aa16.78■□□□□ 0.28
SH3PXD2A-201ENST00000315994 SUPT16HQ9Y5B9 1047 aaKnown RBP16.78■□□□□ 0.28
SH3PXD2A-201ENST00000315994 NEUROD2Q15784 382 aa16.77■□□□□ 0.28
SH3PXD2A-201ENST00000315994 TOP2BQ02880 1626 aa16.77■□□□□ 0.28
SH3PXD2A-201ENST00000315994 SENP3-EIF4A1A0A087X0R7 540 aa16.77■□□□□ 0.28
SH3PXD2A-201ENST00000315994 CUX1P39880 1505 aa16.77■□□□□ 0.28
SH3PXD2A-201ENST00000315994 EIF3AQ14152 1382 aaKnown RBP16.77■□□□□ 0.28
SH3PXD2A-201ENST00000315994 NESP48681 1621 aa16.77■□□□□ 0.27
SH3PXD2A-201ENST00000315994 L3MBTL2Q969R5 705 aa16.76■□□□□ 0.27
SH3PXD2A-201ENST00000315994 DHX57Q6P158 1386 aaKnown RBP16.75■□□□□ 0.27
SH3PXD2A-201ENST00000315994 KTN1Q86UP2 1357 aaKnown RBP16.75■□□□□ 0.27
SH3PXD2A-201ENST00000315994 MORC1Q86VD1 984 aa16.75■□□□□ 0.27
SH3PXD2A-201ENST00000315994 WASHC2CQ9Y4E1 1318 aa16.74■□□□□ 0.27
SH3PXD2A-201ENST00000315994 U2SURPO15042 1029 aaKnown RBP16.74■□□□□ 0.27
SH3PXD2A-201ENST00000315994 SAFB2Q14151 953 aaKnown RBP eCLIP16.74■□□□□ 0.27
SH3PXD2A-201ENST00000315994 BICRAQ9NZM4 1560 aa16.73■□□□□ 0.27
SH3PXD2A-201ENST00000315994 LMOD2Q6P5Q4 547 aa16.73■□□□□ 0.27
SH3PXD2A-201ENST00000315994 FTSJ3Q8IY81 847 aaKnown RBP16.73■□□□□ 0.27
SH3PXD2A-201ENST00000315994 STK26Q9P289 416 aa16.73■□□□□ 0.27
SH3PXD2A-201ENST00000315994 CASKIN1Q8WXD9 1431 aa16.73■□□□□ 0.27
SH3PXD2A-201ENST00000315994 IFT140Q96RY7 1462 aa16.73■□□□□ 0.27
SH3PXD2A-201ENST00000315994 TOPBP1Q92547 1522 aa16.72■□□□□ 0.27
SH3PXD2A-201ENST00000315994 MYOM3Q5VTT5 1437 aa16.71■□□□□ 0.27
SH3PXD2A-201ENST00000315994 HDGFL2Q7Z4V5 671 aaPredicted RBP16.71■□□□□ 0.27
SH3PXD2A-201ENST00000315994 LAS1LQ9Y4W2 734 aaKnown RBP16.71■□□□□ 0.27
SH3PXD2A-201ENST00000315994 LRRC9Q6ZRR7 1453 aa16.7■□□□□ 0.26
SH3PXD2A-201ENST00000315994 FGD6Q6ZV73 1430 aa16.7■□□□□ 0.26
SH3PXD2A-201ENST00000315994 CCDC144AA2RUR9 1427 aa16.69■□□□□ 0.26
SH3PXD2A-201ENST00000315994 RALBP1Q15311 655 aa16.69■□□□□ 0.26
SH3PXD2A-201ENST00000315994 PRDM2Q13029 1718 aa16.68■□□□□ 0.26
SH3PXD2A-201ENST00000315994 POLA1P09884 1462 aaPredicted RBP16.67■□□□□ 0.26
SH3PXD2A-201ENST00000315994 DNMBPQ6XZF7 1577 aa16.67■□□□□ 0.26
SH3PXD2A-201ENST00000315994 MS4A1P11836 297 aa16.66■□□□□ 0.26
SH3PXD2A-201ENST00000315994 PPP4R2Q9NY27 417 aa16.66■□□□□ 0.26
SH3PXD2A-201ENST00000315994 FYCO1Q9BQS8 1478 aa16.66■□□□□ 0.26
SH3PXD2A-201ENST00000315994 EFCAB5A4FU69 1503 aa16.66■□□□□ 0.26
SH3PXD2A-201ENST00000315994 PRXQ9BXM0 1461 aa16.65■□□□□ 0.26
SH3PXD2A-201ENST00000315994 CHMP4BQ9H444 224 aaKnown RBP16.65■□□□□ 0.26
SH3PXD2A-201ENST00000315994 UACAQ9BZF9 1416 aa16.65■□□□□ 0.26
SH3PXD2A-201ENST00000315994 EIF5BO60841 1220 aaKnown RBP16.65■□□□□ 0.26
SH3PXD2A-201ENST00000315994 ANP32BQ92688 251 aaKnown RBP16.65■□□□□ 0.26
SH3PXD2A-201ENST00000315994 CYB5RLQ6IPT4 315 aa16.63■□□□□ 0.25
SH3PXD2A-201ENST00000315994 FRAT1Q92837 279 aaPredicted RBP16.63■□□□□ 0.25
SH3PXD2A-201ENST00000315994 PHLDB1Q86UU1 1377 aa16.63■□□□□ 0.25
SH3PXD2A-201ENST00000315994 DDRGK1Q96HY6 314 aa16.62■□□□□ 0.25
SH3PXD2A-201ENST00000315994 NCOA2Q15596 1464 aa16.62■□□□□ 0.25
SH3PXD2A-201ENST00000315994 ARAP1Q96P48 1450 aa16.62■□□□□ 0.25
SH3PXD2A-201ENST00000315994 EID1Q9Y6B2 187 aa16.6■□□□□ 0.25
SH3PXD2A-201ENST00000315994 BECN1Q14457 450 aa16.59■□□□□ 0.25
SH3PXD2A-201ENST00000315994 LAMC3Q9Y6N6 1575 aa16.58■□□□□ 0.24
SH3PXD2A-201ENST00000315994 SOX12O15370 315 aa16.58■□□□□ 0.24
SH3PXD2A-201ENST00000315994 SYNJ2O15056 1496 aa16.57■□□□□ 0.24
SH3PXD2A-201ENST00000315994 TERF2IPQ9NYB0 399 aa16.57■□□□□ 0.24
SH3PXD2A-201ENST00000315994 PRG4Q92954 1404 aaPredicted RBP16.57■□□□□ 0.24
SH3PXD2A-201ENST00000315994 CASC1Q6TDU7 716 aa16.56■□□□□ 0.24
SH3PXD2A-201ENST00000315994 ARXQ96QS3 562 aa16.56■□□□□ 0.24
SH3PXD2A-201ENST00000315994 SNAPC4Q5SXM2 1469 aa16.55■□□□□ 0.24
SH3PXD2A-201ENST00000315994 KIF15Q9NS87 1388 aa16.55■□□□□ 0.24
SH3PXD2A-201ENST00000315994 NUTM2DQ5VT03 806 aaPredicted RBP16.55■□□□□ 0.24
SH3PXD2A-201ENST00000315994 ZNF644Q9H582 1327 aaPredicted RBP16.55■□□□□ 0.24
SH3PXD2A-201ENST00000315994 PEG3Q9GZU2 1588 aa16.54■□□□□ 0.24
SH3PXD2A-201ENST00000315994 VGFO15240 615 aaPredicted RBP16.53■□□□□ 0.24
SH3PXD2A-201ENST00000315994 EHBP1L1Q8N3D4 1523 aa16.53■□□□□ 0.24
SH3PXD2A-201ENST00000315994 ABCA10Q8WWZ4 1543 aa16.52■□□□□ 0.24
SH3PXD2A-201ENST00000315994 GLIPR1L2Q4G1C9 344 aa16.52■□□□□ 0.24
SH3PXD2A-201ENST00000315994 U2AF1L5P0DN76 240 aaPredicted RBP16.52■□□□□ 0.24
SH3PXD2A-201ENST00000315994 U2AF1Q01081 240 aaKnown RBP eCLIP16.52■□□□□ 0.24
SH3PXD2A-201ENST00000315994 RTF1Q92541 710 aaKnown RBP16.52■□□□□ 0.24
SH3PXD2A-201ENST00000315994 ST20-MTHFSA0A0A6YYL1 179 aa16.52■□□□□ 0.23
SH3PXD2A-201ENST00000315994 NPHP1O15259 732 aa16.51■□□□□ 0.23
SH3PXD2A-201ENST00000315994 RRBP1Q9P2E9 1410 aaKnown RBP16.51■□□□□ 0.23
SH3PXD2A-201ENST00000315994 NLRP13Q86W25 1043 aa16.51■□□□□ 0.23
SH3PXD2A-201ENST00000315994 CALD1Q05682 793 aaKnown RBP16.51■□□□□ 0.23
SH3PXD2A-201ENST00000315994 NBR1Q14596 966 aa16.5■□□□□ 0.23
SH3PXD2A-201ENST00000315994 TRAK1Q9UPV9 953 aa16.5■□□□□ 0.23
SH3PXD2A-201ENST00000315994 ANKRD50Q9ULJ7 1429 aa16.5■□□□□ 0.23
SH3PXD2A-201ENST00000315994 ARHGAP5Q13017 1502 aa16.5■□□□□ 0.23
SH3PXD2A-201ENST00000315994 PAK3O75914 559 aaPredicted RBP16.5■□□□□ 0.23
SH3PXD2A-201ENST00000315994 HECW1Q76N89 1606 aa16.5■□□□□ 0.23
SH3PXD2A-201ENST00000315994 USP47Q96K76 1375 aa16.49■□□□□ 0.23
SH3PXD2A-201ENST00000315994 RGS3P49796 1198 aa16.48■□□□□ 0.23
SH3PXD2A-201ENST00000315994 FAM69CQ0P6D2 419 aa16.48■□□□□ 0.23
SH3PXD2A-201ENST00000315994 B4GALNT3Q6L9W6 998 aa16.47■□□□□ 0.23
SH3PXD2A-201ENST00000315994 UNC13AQ9UPW8 1703 aa16.45■□□□□ 0.22
SH3PXD2A-201ENST00000315994 ERICH6BQ5W0A0 696 aa16.45■□□□□ 0.22
SH3PXD2A-201ENST00000315994 STAC3Q96MF2 364 aa16.45■□□□□ 0.22
SH3PXD2A-201ENST00000315994 MIA2Q96PC5 1412 aa16.45■□□□□ 0.22
SH3PXD2A-201ENST00000315994 MYBBP1AQ9BQG0 1328 aaKnown RBP16.45■□□□□ 0.22
SH3PXD2A-201ENST00000315994 TIAM1Q13009 1591 aa16.44■□□□□ 0.22
SH3PXD2A-201ENST00000315994 IPO8O15397 1037 aaKnown RBP16.44■□□□□ 0.22
SH3PXD2A-201ENST00000315994 RCAN3Q9UKA8 241 aa16.44■□□□□ 0.22
SH3PXD2A-201ENST00000315994 CUL7Q14999 1698 aa16.43■□□□□ 0.22
SH3PXD2A-201ENST00000315994 PANK3Q9H999 370 aa16.43■□□□□ 0.22
SH3PXD2A-201ENST00000315994 KIAA0586Q9BVV6 1533 aa16.43■□□□□ 0.22
SH3PXD2A-201ENST00000315994 EVC2Q86UK5 1308 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms