RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 GAPVD1Q14C86 1478 aa14.1□□□□□ -0.15
MSRB3-201ENST00000308259 PDE4CQ08493 712 aa14.1□□□□□ -0.15
MSRB3-201ENST00000308259 B4GALNT3Q6L9W6 998 aa14.1□□□□□ -0.15
MSRB3-201ENST00000308259 SNAPC4Q5SXM2 1469 aa14.09□□□□□ -0.15
MSRB3-201ENST00000308259 NAP1L5Q96NT1 182 aaPredicted RBP14.09□□□□□ -0.15
MSRB3-201ENST00000308259 PLEKHD1A6NEE1 506 aa14.09□□□□□ -0.15
MSRB3-201ENST00000308259 ZMYND15Q9H091 742 aa14.09□□□□□ -0.15
MSRB3-201ENST00000308259 UACAQ9BZF9 1416 aa14.09□□□□□ -0.15
MSRB3-201ENST00000308259 ARXQ96QS3 562 aa14.09□□□□□ -0.15
MSRB3-201ENST00000308259 BRPF3Q9ULD4 1205 aa14.08□□□□□ -0.15
MSRB3-201ENST00000308259 WASHC2AQ641Q2 1341 aa14.08□□□□□ -0.16
MSRB3-201ENST00000308259 HFM1A2PYH4 1435 aa14.08□□□□□ -0.16
MSRB3-201ENST00000308259 URB2Q14146 1524 aaKnown RBP14.08□□□□□ -0.16
MSRB3-201ENST00000308259 FAM9BQ8IZU0 186 aa14.07□□□□□ -0.16
MSRB3-201ENST00000308259 MYOM3Q5VTT5 1437 aa14.07□□□□□ -0.16
MSRB3-201ENST00000308259 EFCAB5A4FU69 1503 aa14.07□□□□□ -0.16
MSRB3-201ENST00000308259 POLR3GLQ9BT43 218 aa14.07□□□□□ -0.16
MSRB3-201ENST00000308259 ARID4BQ4LE39 1312 aaPredicted RBP14.06□□□□□ -0.16
MSRB3-201ENST00000308259 RSPH6AQ9H0K4 717 aa14.06□□□□□ -0.16
MSRB3-201ENST00000308259 PTPN23Q9H3S7 1636 aa14.05□□□□□ -0.16
MSRB3-201ENST00000308259 C11orf95C9JLR9 678 aaPredicted RBP14.05□□□□□ -0.16
MSRB3-201ENST00000308259 L3MBTL2Q969R5 705 aa14.05□□□□□ -0.16
MSRB3-201ENST00000308259 GRIN2BQ13224 1484 aa14.04□□□□□ -0.16
MSRB3-201ENST00000308259 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.04□□□□□ -0.16
MSRB3-201ENST00000308259 MPHOSPH9Q99550 1183 aa14.03□□□□□ -0.16
MSRB3-201ENST00000308259 ZNF644Q9H582 1327 aaPredicted RBP14.03□□□□□ -0.16
MSRB3-201ENST00000308259 ZNF326Q5BKZ1 582 aaKnown RBP14.02□□□□□ -0.16
MSRB3-201ENST00000308259 MAGI3Q5TCQ9 1506 aa14.02□□□□□ -0.17
MSRB3-201ENST00000308259 EIF4G2P78344 907 aaKnown RBP eCLIP14.02□□□□□ -0.17
MSRB3-201ENST00000308259 CTTNBP2Q8WZ74 1663 aa14.02□□□□□ -0.17
MSRB3-201ENST00000308259 AMER1Q5JTC6 1135 aaPredicted RBP14.01□□□□□ -0.17
MSRB3-201ENST00000308259 LRRIQ1Q96JM4 1722 aa14□□□□□ -0.17
MSRB3-201ENST00000308259 HSP90AA2PQ14568 343 aaPredicted RBP14□□□□□ -0.17
MSRB3-201ENST00000308259 CUL7Q14999 1698 aa14□□□□□ -0.17
MSRB3-201ENST00000308259 JPH4Q96JJ6 628 aa13.99□□□□□ -0.17
MSRB3-201ENST00000308259 ZNF777Q9ULD5 760 aaPredicted RBP13.99□□□□□ -0.17
MSRB3-201ENST00000308259 PPP4R2Q9NY27 417 aa13.99□□□□□ -0.17
MSRB3-201ENST00000308259 CDK13Q14004 1512 aaKnown RBP13.98□□□□□ -0.17
MSRB3-201ENST00000308259 KDM6BO15054 1643 aa13.98□□□□□ -0.17
MSRB3-201ENST00000308259 NBPF8Q3BBV2 869 aa13.98□□□□□ -0.17
MSRB3-201ENST00000308259 IPO9Q96P70 1041 aaKnown RBP13.97□□□□□ -0.17
MSRB3-201ENST00000308259 MRS2Q9HD23 443 aa13.97□□□□□ -0.17
MSRB3-201ENST00000308259 KDM5BQ9UGL1 1544 aa13.96□□□□□ -0.17
MSRB3-201ENST00000308259 DENND4BO75064 1496 aaPredicted RBP13.96□□□□□ -0.18
MSRB3-201ENST00000308259 SLC4A1APQ9BWU0 796 aaKnown RBP13.95□□□□□ -0.18
MSRB3-201ENST00000308259 HSP90AA1P07900 732 aaKnown RBP13.94□□□□□ -0.18
MSRB3-201ENST00000308259 SUPT6HQ7KZ85 1726 aaKnown RBP13.94□□□□□ -0.18
MSRB3-201ENST00000308259 PPM1GO15355 546 aaPredicted RBP13.93□□□□□ -0.18
MSRB3-201ENST00000308259 ESF1Q9H501 851 aaKnown RBP13.93□□□□□ -0.18
MSRB3-201ENST00000308259 SAMD9Q5K651 1589 aa13.93□□□□□ -0.18
MSRB3-201ENST00000308259 EHBP1L1Q8N3D4 1523 aa13.92□□□□□ -0.18
MSRB3-201ENST00000308259 UGGT2Q9NYU1 1516 aa13.92□□□□□ -0.18
MSRB3-201ENST00000308259 TSPY4P0CV99 314 aa13.92□□□□□ -0.18
MSRB3-201ENST00000308259 TSPY10P0CW01 314 aa13.92□□□□□ -0.18
MSRB3-201ENST00000308259 PRKRIP1Q9H875 184 aaPredicted RBP13.92□□□□□ -0.18
MSRB3-201ENST00000308259 ABCA5Q8WWZ7 1642 aa13.9□□□□□ -0.18
MSRB3-201ENST00000308259 EPRSP07814 1512 aaKnown RBP13.9□□□□□ -0.18
MSRB3-201ENST00000308259 PDIA4P13667 645 aaKnown RBP13.89□□□□□ -0.19
MSRB3-201ENST00000308259 CCDC7Q96M83 1385 aa13.88□□□□□ -0.19
MSRB3-201ENST00000308259 THOC2Q8NI27 1593 aaKnown RBP13.88□□□□□ -0.19
MSRB3-201ENST00000308259 KIF7Q2M1P5 1343 aa13.87□□□□□ -0.19
MSRB3-201ENST00000308259 CNTLNQ9NXG0 1405 aa13.86□□□□□ -0.19
MSRB3-201ENST00000308259 GSE1Q14687 1217 aa13.86□□□□□ -0.19
MSRB3-201ENST00000308259 PTPRGP23470 1445 aa13.85□□□□□ -0.19
MSRB3-201ENST00000308259 KIF21AQ7Z4S6 1674 aa13.84□□□□□ -0.19
MSRB3-201ENST00000308259 TRHP20396 242 aaPredicted RBP13.83□□□□□ -0.19
MSRB3-201ENST00000308259 PNNQ9H307 717 aaKnown RBP13.83□□□□□ -0.19
MSRB3-201ENST00000308259 KDM2AQ9Y2K7 1162 aa13.83□□□□□ -0.2
MSRB3-201ENST00000308259 ARHGEF11O15085 1522 aa13.83□□□□□ -0.2
MSRB3-201ENST00000308259 ANKRD30BQ9BXX2 1392 aa13.83□□□□□ -0.2
MSRB3-201ENST00000308259 CFDP1Q9UEE9 299 aaPredicted RBP13.83□□□□□ -0.2
MSRB3-201ENST00000308259 MAGI1Q96QZ7 1491 aaPredicted RBP13.82□□□□□ -0.2
MSRB3-201ENST00000308259 TCOF1Q13428 1488 aaKnown RBP13.82□□□□□ -0.2
MSRB3-201ENST00000308259 ZNF608Q9ULD9 1512 aaPredicted RBP13.81□□□□□ -0.2
MSRB3-201ENST00000308259 ABCC5O15440 1437 aa13.81□□□□□ -0.2
MSRB3-201ENST00000308259 DAPK1P53355 1430 aa13.81□□□□□ -0.2
MSRB3-201ENST00000308259 HECW1Q76N89 1606 aa13.81□□□□□ -0.2
MSRB3-201ENST00000308259 NCOA1Q15788 1441 aa13.81□□□□□ -0.2
MSRB3-201ENST00000308259 PKD2Q13563 968 aa13.8□□□□□ -0.2
MSRB3-201ENST00000308259 IQGAP2Q13576 1575 aa13.8□□□□□ -0.2
MSRB3-201ENST00000308259 USP35Q9P2H5 1018 aa13.8□□□□□ -0.2
MSRB3-201ENST00000308259 PRG4Q92954 1404 aaPredicted RBP13.8□□□□□ -0.2
MSRB3-201ENST00000308259 RBM10P98175 930 aaKnown RBP13.79□□□□□ -0.2
MSRB3-201ENST00000308259 ARID3AQ99856 593 aa13.78□□□□□ -0.2
MSRB3-201ENST00000308259 TARBP1Q13395 1621 aaKnown RBP13.78□□□□□ -0.2
MSRB3-201ENST00000308259 CYB5RLQ6IPT4 315 aa13.77□□□□□ -0.2
MSRB3-201ENST00000308259 MIA2Q96PC5 1412 aa13.77□□□□□ -0.2
MSRB3-201ENST00000308259 SYNJ2O15056 1496 aa13.77□□□□□ -0.21
MSRB3-201ENST00000308259 AKNAQ7Z591 1439 aa13.76□□□□□ -0.21
MSRB3-201ENST00000308259 RPRD2Q5VT52 1461 aaKnown RBP13.76□□□□□ -0.21
MSRB3-201ENST00000308259 WDR62O43379 1518 aa13.76□□□□□ -0.21
MSRB3-201ENST00000308259 CDK11BP21127 795 aaKnown RBP13.76□□□□□ -0.21
MSRB3-201ENST00000308259 GCC2Q8IWJ2 1684 aa13.76□□□□□ -0.21
MSRB3-201ENST00000308259 ZBED9Q6R2W3 1325 aa13.76□□□□□ -0.21
MSRB3-201ENST00000308259 BCL11BQ9C0K0 894 aaPredicted RBP13.76□□□□□ -0.21
MSRB3-201ENST00000308259 FRAT1Q92837 279 aaPredicted RBP13.74□□□□□ -0.21
MSRB3-201ENST00000308259 TEX14Q8IWB6 1497 aa13.74□□□□□ -0.21
MSRB3-201ENST00000308259 USP47Q96K76 1375 aa13.73□□□□□ -0.21
MSRB3-201ENST00000308259 NUP153P49790 1475 aaKnown RBP13.73□□□□□ -0.21
MSRB3-201ENST00000308259 EFCAB2Q5VUJ9 269 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms