RNA–Protein interactions for RNA: ENST00000308064.6

CHST1-201, Transcript of carbohydrate sulfotransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHST1, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHST1-201ENST00000308064 PRG4Q92954 1404 aaPredicted RBP28.37■■■□□ 2.13
CHST1-201ENST00000308064 BCANQ96GW7 911 aa28.36■■■□□ 2.13
CHST1-201ENST00000308064 ROCK1Q13464 1354 aa28.35■■■□□ 2.13
CHST1-201ENST00000308064 CEP170Q5SW79 1584 aa28.35■■■□□ 2.13
CHST1-201ENST00000308064 PLB1Q6P1J6 1458 aa28.35■■■□□ 2.13
CHST1-201ENST00000308064 ERCC6Q03468 1493 aa28.33■■■□□ 2.13
CHST1-201ENST00000308064 FKBP8Q14318 412 aa28.32■■■□□ 2.12
CHST1-201ENST00000308064 ANKRD30BQ9BXX2 1392 aa28.31■■■□□ 2.12
CHST1-201ENST00000308064 CHMP7Q8WUX9 453 aaPredicted RBP28.31■■■□□ 2.12
CHST1-201ENST00000308064 FBLN2P98095 1184 aa28.3■■■□□ 2.12
CHST1-201ENST00000308064 CDK11AQ9UQ88 783 aaPredicted RBP28.29■■■□□ 2.12
CHST1-201ENST00000308064 TROQ12816 1431 aaPredicted RBP28.28■■■□□ 2.12
CHST1-201ENST00000308064 MAGI1Q96QZ7 1491 aaPredicted RBP28.28■■■□□ 2.12
CHST1-201ENST00000308064 EIF4G2P78344 907 aaKnown RBP eCLIP28.27■■■□□ 2.12
CHST1-201ENST00000308064 KIF14Q15058 1648 aa28.26■■■□□ 2.11
CHST1-201ENST00000308064 NBPF8Q3BBV2 869 aa28.26■■■□□ 2.11
CHST1-201ENST00000308064 CAMSAP2Q08AD1 1489 aa28.25■■■□□ 2.11
CHST1-201ENST00000308064 SYNJ2O15056 1496 aa28.25■■■□□ 2.11
CHST1-201ENST00000308064 RPRD2Q5VT52 1461 aaKnown RBP28.25■■■□□ 2.11
CHST1-201ENST00000308064 C11orf95C9JLR9 678 aaPredicted RBP28.25■■■□□ 2.11
CHST1-201ENST00000308064 SLC4A1APQ9BWU0 796 aaKnown RBP28.24■■■□□ 2.11
CHST1-201ENST00000308064 TEX14Q8IWB6 1497 aa28.24■■■□□ 2.11
CHST1-201ENST00000308064 TSHZ2Q9NRE2 1034 aa28.23■■■□□ 2.11
CHST1-201ENST00000308064 CFDP1Q9UEE9 299 aaPredicted RBP28.23■■■□□ 2.11
CHST1-201ENST00000308064 GPATCH8Q9UKJ3 1502 aaKnown RBP28.22■■■□□ 2.11
CHST1-201ENST00000308064 ZNF777Q9ULD5 760 aaPredicted RBP28.21■■■□□ 2.11
CHST1-201ENST00000308064 PZPP20742 1482 aa28.18■■■□□ 2.1
CHST1-201ENST00000308064 JPH4Q96JJ6 628 aa28.17■■■□□ 2.1
CHST1-201ENST00000308064 NCOA1Q15788 1441 aa28.16■■■□□ 2.1
CHST1-201ENST00000308064 ITSN2Q9NZM3 1697 aa28.15■■■□□ 2.1
CHST1-201ENST00000308064 NUP160Q12769 1436 aa28.15■■■□□ 2.1
CHST1-201ENST00000308064 CNTLNQ9NXG0 1405 aa28.14■■■□□ 2.1
CHST1-201ENST00000308064 CCDC184Q52MB2 194 aa28.13■■■□□ 2.09
CHST1-201ENST00000308064 ADCY10Q96PN6 1610 aa28.13■■■□□ 2.09
CHST1-201ENST00000308064 CCDC7Q96M83 1385 aa28.12■■■□□ 2.09
CHST1-201ENST00000308064 HNRNPUQ00839 825 aaKnown RBP eCLIP28.12■■■□□ 2.09
CHST1-201ENST00000308064 CARMIL2Q6F5E8 1435 aa28.1■■■□□ 2.09
CHST1-201ENST00000308064 ADGBQ8N7X0 1667 aa28.1■■■□□ 2.09
CHST1-201ENST00000308064 CROCC2H7BZ55 1655 aa28.08■■■□□ 2.09
CHST1-201ENST00000308064 NEFLP07196 543 aa28.08■■■□□ 2.09
CHST1-201ENST00000308064 SPATA31E1Q6ZUB1 1445 aa28.06■■■□□ 2.08
CHST1-201ENST00000308064 ADGRL2O95490 1459 aa28.06■■■□□ 2.08
CHST1-201ENST00000308064 KIF7Q2M1P5 1343 aa28.02■■■□□ 2.08
CHST1-201ENST00000308064 ABCA8O94911 1581 aa28.02■■■□□ 2.08
CHST1-201ENST00000308064 CDC42BPAQ5VT25 1732 aa28.02■■■□□ 2.08
CHST1-201ENST00000308064 ATP10BO94823 1461 aa28.01■■■□□ 2.07
CHST1-201ENST00000308064 PKD2Q13563 968 aa28■■■□□ 2.07
CHST1-201ENST00000308064 PRKRIP1Q9H875 184 aaPredicted RBP28■■■□□ 2.07
CHST1-201ENST00000308064 KIAA1107Q9UPP5 1409 aa28■■■□□ 2.07
CHST1-201ENST00000308064 ANKRD30AQ9BXX3 1397 aa27.99■■■□□ 2.07
CHST1-201ENST00000308064 ABCC10Q5T3U5 1492 aa27.99■■■□□ 2.07
CHST1-201ENST00000308064 PLEKHD1A6NEE1 506 aa27.98■■■□□ 2.07
CHST1-201ENST00000308064 ANKRD50Q9ULJ7 1429 aa27.98■■■□□ 2.07
CHST1-201ENST00000308064 MBD5Q9P267 1494 aa27.98■■■□□ 2.07
CHST1-201ENST00000308064 ZNF326Q5BKZ1 582 aaKnown RBP27.96■■■□□ 2.07
CHST1-201ENST00000308064 C9orf84Q5VXU9 1444 aa27.92■■■□□ 2.06
CHST1-201ENST00000308064 POLR1AO95602 1720 aaPredicted RBP27.91■■■□□ 2.06
CHST1-201ENST00000308064 IRX6P78412 446 aaPredicted RBP27.91■■■□□ 2.06
CHST1-201ENST00000308064 FAM9BQ8IZU0 186 aa27.9■■■□□ 2.06
CHST1-201ENST00000308064 MRS2Q9HD23 443 aa27.89■■■□□ 2.05
CHST1-201ENST00000308064 NUP155O75694 1391 aa27.88■■■□□ 2.05
CHST1-201ENST00000308064 BCORL1Q5H9F3 1711 aa27.87■■■□□ 2.05
CHST1-201ENST00000308064 HNRNPMP52272 730 aaKnown RBP eCLIP27.86■■■□□ 2.05
CHST1-201ENST00000308064 USP47Q96K76 1375 aa27.86■■■□□ 2.05
CHST1-201ENST00000308064 SHANK2Q9UPX8 1470 aa27.85■■■□□ 2.05
CHST1-201ENST00000308064 CNGB1Q14028 1251 aaPredicted RBP27.83■■■□□ 2.04
CHST1-201ENST00000308064 POLR3GLQ9BT43 218 aa27.82■■■□□ 2.04
CHST1-201ENST00000308064 KIF15Q9NS87 1388 aa27.8■■■□□ 2.04
CHST1-201ENST00000308064 PTPRGP23470 1445 aa27.79■■■□□ 2.04
CHST1-201ENST00000308064 TSPY4P0CV99 314 aa27.79■■■□□ 2.04
CHST1-201ENST00000308064 TSPY10P0CW01 314 aa27.79■■■□□ 2.04
CHST1-201ENST00000308064 KDM5CP41229 1560 aa27.79■■■□□ 2.04
CHST1-201ENST00000308064 DHX29Q7Z478 1369 aaKnown RBP27.79■■■□□ 2.04
CHST1-201ENST00000308064 SAMD9LQ8IVG5 1584 aa27.75■■■□□ 2.03
CHST1-201ENST00000308064 KDM5DQ9BY66 1539 aa27.74■■■□□ 2.03
CHST1-201ENST00000308064 CDC42BPBQ9Y5S2 1711 aa27.73■■■□□ 2.03
CHST1-201ENST00000308064 UHRF1BP1Q6BDS2 1440 aa27.73■■■□□ 2.03
CHST1-201ENST00000308064 MYT1Q01538 1121 aa27.72■■■□□ 2.03
CHST1-201ENST00000308064 KDM2AQ9Y2K7 1162 aa27.72■■■□□ 2.03
CHST1-201ENST00000308064 ARHGEF5Q12774 1597 aa27.72■■■□□ 2.03
CHST1-201ENST00000308064 RALGAPBQ86X10 1494 aa27.71■■■□□ 2.03
CHST1-201ENST00000308064 ZBED9Q6R2W3 1325 aa27.7■■■□□ 2.02
CHST1-201ENST00000308064 RBM19Q9Y4C8 960 aaKnown RBP27.69■■■□□ 2.02
CHST1-201ENST00000308064 PREX2Q70Z35 1606 aa27.68■■■□□ 2.02
CHST1-201ENST00000308064 CCDC141Q6ZP82 1450 aa27.68■■■□□ 2.02
CHST1-201ENST00000308064 CARD11Q9BXL7 1154 aa27.68■■■□□ 2.02
CHST1-201ENST00000308064 CHD1O14646 1710 aa27.66■■■□□ 2.02
CHST1-201ENST00000308064 ARHGEF12Q9NZN5 1544 aa27.66■■■□□ 2.02
CHST1-201ENST00000308064 DCAF11Q8TEB1 546 aa27.65■■■□□ 2.02
CHST1-201ENST00000308064 TTC37Q6PGP7 1564 aa27.63■■■□□ 2.01
CHST1-201ENST00000308064 FAM135AQ9P2D6 1515 aa27.63■■■□□ 2.01
CHST1-201ENST00000308064 SYCP2Q9BX26 1530 aa27.63■■■□□ 2.01
CHST1-201ENST00000308064 ST20-MTHFSA0A0A6YYL1 179 aa27.61■■■□□ 2.01
CHST1-201ENST00000308064 SENP3-EIF4A1A0A087X0R7 540 aa27.6■■■□□ 2.01
CHST1-201ENST00000308064 ERCC6L2Q5T890 1561 aa27.6■■■□□ 2.01
CHST1-201ENST00000308064 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.57■■■□□ 2
CHST1-201ENST00000308064 ARID4BQ4LE39 1312 aaPredicted RBP27.56■■■□□ 2
CHST1-201ENST00000308064 ARHGAP5Q13017 1502 aa27.56■■■□□ 2
CHST1-201ENST00000308064 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.53■■■□□ 2
CHST1-201ENST00000308064 SHROOM2Q13796 1616 aa27.52■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms