RNA–Protein interactions for RNA: ENST00000307767.12

TVP23B-201, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TVP23B, Length 2,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-201ENST00000307767 ROCK1Q13464 1354 aa23.88■■□□□ 1.41
TVP23B-201ENST00000307767 CHD1O14646 1710 aa23.86■■□□□ 1.41
TVP23B-201ENST00000307767 KDM5BQ9UGL1 1544 aa23.83■■□□□ 1.4
TVP23B-201ENST00000307767 CAMSAP2Q08AD1 1489 aa23.82■■□□□ 1.4
TVP23B-201ENST00000307767 ABCC10Q5T3U5 1492 aa23.82■■□□□ 1.4
TVP23B-201ENST00000307767 PTPRGP23470 1445 aa23.81■■□□□ 1.4
TVP23B-201ENST00000307767 SHROOM2Q13796 1616 aa23.8■■□□□ 1.4
TVP23B-201ENST00000307767 CFDP1Q9UEE9 299 aaPredicted RBP23.8■■□□□ 1.4
TVP23B-201ENST00000307767 ITSN2Q9NZM3 1697 aa23.77■■□□□ 1.4
TVP23B-201ENST00000307767 PLEKHD1A6NEE1 506 aa23.77■■□□□ 1.4
TVP23B-201ENST00000307767 MPHOSPH9Q99550 1183 aa23.75■■□□□ 1.39
TVP23B-201ENST00000307767 TONSLQ96HA7 1378 aa23.75■■□□□ 1.39
TVP23B-201ENST00000307767 TRIM52Q96A61 297 aa23.74■■□□□ 1.39
TVP23B-201ENST00000307767 CENPBP07199 599 aaPredicted RBP23.73■■□□□ 1.39
TVP23B-201ENST00000307767 NCOA1Q15788 1441 aa23.73■■□□□ 1.39
TVP23B-201ENST00000307767 ERCC6L2Q5T890 1561 aa23.73■■□□□ 1.39
TVP23B-201ENST00000307767 CDC42BPAQ5VT25 1732 aa23.71■■□□□ 1.39
TVP23B-201ENST00000307767 ADGRL2O95490 1459 aa23.7■■□□□ 1.39
TVP23B-201ENST00000307767 YTHDC1Q96MU7 727 aaKnown RBP23.68■■□□□ 1.38
TVP23B-201ENST00000307767 ZNF777Q9ULD5 760 aaPredicted RBP23.68■■□□□ 1.38
TVP23B-201ENST00000307767 FOXD1Q16676 465 aa23.66■■□□□ 1.38
TVP23B-201ENST00000307767 CROCC2H7BZ55 1655 aa23.66■■□□□ 1.38
TVP23B-201ENST00000307767 ANKRD30BQ9BXX2 1392 aa23.65■■□□□ 1.38
TVP23B-201ENST00000307767 CLASP1Q7Z460 1538 aa23.63■■□□□ 1.37
TVP23B-201ENST00000307767 HIRIP3Q9BW71 556 aaPredicted RBP23.63■■□□□ 1.37
TVP23B-201ENST00000307767 PZPP20742 1482 aa23.63■■□□□ 1.37
TVP23B-201ENST00000307767 ADGBQ8N7X0 1667 aa23.62■■□□□ 1.37
TVP23B-201ENST00000307767 MBD5Q9P267 1494 aa23.59■■□□□ 1.37
TVP23B-201ENST00000307767 SHANK2Q9UPX8 1470 aa23.58■■□□□ 1.37
TVP23B-201ENST00000307767 ABCC2Q92887 1545 aa23.57■■□□□ 1.36
TVP23B-201ENST00000307767 ANKRD30AQ9BXX3 1397 aa23.57■■□□□ 1.36
TVP23B-201ENST00000307767 DDX10Q13206 875 aaKnown RBP23.56■■□□□ 1.36
TVP23B-201ENST00000307767 RPRD2Q5VT52 1461 aaKnown RBP23.56■■□□□ 1.36
TVP23B-201ENST00000307767 L3MBTL2Q969R5 705 aa23.55■■□□□ 1.36
TVP23B-201ENST00000307767 SLC4A1APQ9BWU0 796 aaKnown RBP23.55■■□□□ 1.36
TVP23B-201ENST00000307767 C9orf84Q5VXU9 1444 aa23.54■■□□□ 1.36
TVP23B-201ENST00000307767 CDC42BPBQ9Y5S2 1711 aa23.53■■□□□ 1.36
TVP23B-201ENST00000307767 ARHGEF5Q12774 1597 aa23.53■■□□□ 1.36
TVP23B-201ENST00000307767 SAMD9LQ8IVG5 1584 aa23.53■■□□□ 1.36
TVP23B-201ENST00000307767 HNRNPMP52272 730 aaKnown RBP eCLIP23.52■■□□□ 1.366e-8■■■□□ 15.2
TVP23B-201ENST00000307767 GTF3C3Q9Y5Q9 886 aa23.52■■□□□ 1.36
TVP23B-201ENST00000307767 ANKRD50Q9ULJ7 1429 aa23.52■■□□□ 1.36
TVP23B-201ENST00000307767 PREX2Q70Z35 1606 aa23.52■■□□□ 1.36
TVP23B-201ENST00000307767 TEX14Q8IWB6 1497 aa23.51■■□□□ 1.35
TVP23B-201ENST00000307767 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.5■■□□□ 1.35
TVP23B-201ENST00000307767 TTC37Q6PGP7 1564 aa23.49■■□□□ 1.35
TVP23B-201ENST00000307767 UHRF1BP1LA0JNW5 1464 aa23.47■■□□□ 1.35
TVP23B-201ENST00000307767 KCNH8Q96L42 1107 aa23.46■■□□□ 1.35
TVP23B-201ENST00000307767 KIAA1107Q9UPP5 1409 aa23.45■■□□□ 1.34
TVP23B-201ENST00000307767 NBPF8Q3BBV2 869 aa23.44■■□□□ 1.34
TVP23B-201ENST00000307767 CCDC141Q6ZP82 1450 aa23.43■■□□□ 1.34
TVP23B-201ENST00000307767 TSPY4P0CV99 314 aa23.43■■□□□ 1.34
TVP23B-201ENST00000307767 TSPY10P0CW01 314 aa23.43■■□□□ 1.34
TVP23B-201ENST00000307767 KIF15Q9NS87 1388 aa23.41■■□□□ 1.34
TVP23B-201ENST00000307767 KDM5DQ9BY66 1539 aa23.41■■□□□ 1.34
TVP23B-201ENST00000307767 HSPA5P11021 654 aaKnown RBP23.4■■□□□ 1.34
TVP23B-201ENST00000307767 PKD2Q13563 968 aa23.4■■□□□ 1.34
TVP23B-201ENST00000307767 ZCCHC11Q5TAX3 1644 aaKnown RBP23.39■■□□□ 1.34
TVP23B-201ENST00000307767 SYCP2Q9BX26 1530 aa23.38■■□□□ 1.33
TVP23B-201ENST00000307767 RSPH4AQ5TD94 716 aa23.37■■□□□ 1.33
TVP23B-201ENST00000307767 NUP155O75694 1391 aa23.37■■□□□ 1.33
TVP23B-201ENST00000307767 ARHGAP5Q13017 1502 aa23.36■■□□□ 1.33
TVP23B-201ENST00000307767 ARHGEF12Q9NZN5 1544 aa23.35■■□□□ 1.33
TVP23B-201ENST00000307767 MAST1Q9Y2H9 1570 aa23.35■■□□□ 1.33
TVP23B-201ENST00000307767 WASHC2AQ641Q2 1341 aa23.34■■□□□ 1.33
TVP23B-201ENST00000307767 PLCH2O75038 1416 aa23.33■■□□□ 1.33
TVP23B-201ENST00000307767 MYO5CQ9NQX4 1742 aa23.32■■□□□ 1.32
TVP23B-201ENST00000307767 EIF4G2P78344 907 aaKnown RBP eCLIP23.31■■□□□ 1.32
TVP23B-201ENST00000307767 SPATA31E1Q6ZUB1 1445 aa23.31■■□□□ 1.32
TVP23B-201ENST00000307767 C11orf95C9JLR9 678 aaPredicted RBP23.29■■□□□ 1.32
TVP23B-201ENST00000307767 PLEKHH2Q8IVE3 1493 aa23.27■■□□□ 1.32
TVP23B-201ENST00000307767 CCER2I3L3R5 266 aa23.24■■□□□ 1.31
TVP23B-201ENST00000307767 PLXNC1O60486 1568 aa23.23■■□□□ 1.31
TVP23B-201ENST00000307767 FAM135AQ9P2D6 1515 aa23.23■■□□□ 1.31
TVP23B-201ENST00000307767 ANP32CO43423 234 aa23.22■■□□□ 1.31
TVP23B-201ENST00000307767 ABCC1P33527 1531 aa23.21■■□□□ 1.31
TVP23B-201ENST00000307767 EFCAB2Q5VUJ9 269 aa23.21■■□□□ 1.31
TVP23B-201ENST00000307767 UNC13BO14795 1591 aa23.2■■□□□ 1.31
TVP23B-201ENST00000307767 TRAPPC8Q9Y2L5 1435 aa23.2■■□□□ 1.3
TVP23B-201ENST00000307767 UHRF1BP1Q6BDS2 1440 aa23.2■■□□□ 1.3
TVP23B-201ENST00000307767 CCDC7Q96M83 1385 aa23.18■■□□□ 1.3
TVP23B-201ENST00000307767 PLA2R1Q13018 1463 aa23.17■■□□□ 1.3
TVP23B-201ENST00000307767 ARAP3Q8WWN8 1544 aa23.16■■□□□ 1.3
TVP23B-201ENST00000307767 WDR7Q9Y4E6 1490 aa23.16■■□□□ 1.3
TVP23B-201ENST00000307767 DUOX2Q9NRD8 1548 aa23.14■■□□□ 1.3
TVP23B-201ENST00000307767 MAGI2Q86UL8 1455 aa23.14■■□□□ 1.29
TVP23B-201ENST00000307767 CNTLNQ9NXG0 1405 aa23.12■■□□□ 1.29
TVP23B-201ENST00000307767 KIF7Q2M1P5 1343 aa23.11■■□□□ 1.29
TVP23B-201ENST00000307767 ERBINQ96RT1 1412 aa23.11■■□□□ 1.29
TVP23B-201ENST00000307767 IQGAP3Q86VI3 1631 aa23.1■■□□□ 1.29
TVP23B-201ENST00000307767 RALGAPBQ86X10 1494 aa23.09■■□□□ 1.29
TVP23B-201ENST00000307767 AFAP1Q8N556 730 aa23.08■■□□□ 1.29
TVP23B-201ENST00000307767 USP47Q96K76 1375 aa23.07■■□□□ 1.28
TVP23B-201ENST00000307767 ABCA9Q8IUA7 1624 aa23.07■■□□□ 1.28
TVP23B-201ENST00000307767 KDM5CP41229 1560 aa23.07■■□□□ 1.28
TVP23B-201ENST00000307767 ZNF326Q5BKZ1 582 aaKnown RBP23.06■■□□□ 1.28
TVP23B-201ENST00000307767 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.06■■□□□ 1.28
TVP23B-201ENST00000307767 RTEL1-TNFRSF6BF6WH68 1400 aa23.06■■□□□ 1.28
TVP23B-201ENST00000307767 OSCARQ8IYS5 282 aa23.05■■□□□ 1.28
TVP23B-201ENST00000307767 BCORL1Q5H9F3 1711 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms