RNA–Protein interactions for RNA: ENST00000306107.9

ALCAM-201, Transcript of activated leukocyte cell adhesion molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALCAM, Length 4,701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALCAM-201ENST00000306107 FKBP8Q14318 412 aa18.48■□□□□ 0.55
ALCAM-201ENST00000306107 HDGFL2Q7Z4V5 671 aaPredicted RBP18.47■□□□□ 0.55
ALCAM-201ENST00000306107 MPHOSPH9Q99550 1183 aa18.47■□□□□ 0.55
ALCAM-201ENST00000306107 FGD5Q6ZNL6 1462 aa18.47■□□□□ 0.55
ALCAM-201ENST00000306107 NGDNQ8NEJ9 315 aaKnown RBP18.47■□□□□ 0.55
ALCAM-201ENST00000306107 UPF2Q9HAU5 1272 aaKnown RBP18.45■□□□□ 0.54
ALCAM-201ENST00000306107 CCDC18Q5T9S5 1454 aa18.44■□□□□ 0.54
ALCAM-201ENST00000306107 MORC1Q86VD1 984 aa18.44■□□□□ 0.54
ALCAM-201ENST00000306107 NESP48681 1621 aa18.44■□□□□ 0.54
ALCAM-201ENST00000306107 CCDC136Q96JN2 1154 aa18.44■□□□□ 0.54
ALCAM-201ENST00000306107 IGF1RP08069 1367 aa18.41■□□□□ 0.54
ALCAM-201ENST00000306107 SETD5Q9C0A6 1442 aa18.39■□□□□ 0.53
ALCAM-201ENST00000306107 MIER1Q8N108 512 aa18.38■□□□□ 0.53
ALCAM-201ENST00000306107 ZNF330Q9Y3S2 320 aaPredicted RBP18.37■□□□□ 0.53
ALCAM-201ENST00000306107 TRAK1Q9UPV9 953 aa18.36■□□□□ 0.53
ALCAM-201ENST00000306107 IRX6P78412 446 aaPredicted RBP18.35■□□□□ 0.53
ALCAM-201ENST00000306107 RUSC2Q8N2Y8 1516 aa18.34■□□□□ 0.53
ALCAM-201ENST00000306107 PNNQ9H307 717 aaKnown RBP18.34■□□□□ 0.53
ALCAM-201ENST00000306107 ANP32AP39687 249 aaKnown RBP18.33■□□□□ 0.53
ALCAM-201ENST00000306107 RTF1Q92541 710 aaKnown RBP18.33■□□□□ 0.53
ALCAM-201ENST00000306107 FTSJ3Q8IY81 847 aaKnown RBP18.32■□□□□ 0.52
ALCAM-201ENST00000306107 CC2D2AQ9P2K1 1620 aa18.32■□□□□ 0.52
ALCAM-201ENST00000306107 LTV1Q96GA3 475 aaPredicted RBP18.3■□□□□ 0.52
ALCAM-201ENST00000306107 ROCK2O75116 1388 aaKnown RBP18.3■□□□□ 0.52
ALCAM-201ENST00000306107 VGFO15240 615 aaPredicted RBP18.29■□□□□ 0.52
ALCAM-201ENST00000306107 AFAP1Q8N556 730 aa18.29■□□□□ 0.52
ALCAM-201ENST00000306107 FRAT1Q92837 279 aaPredicted RBP18.29■□□□□ 0.52
ALCAM-201ENST00000306107 TERF2IPQ9NYB0 399 aa18.28■□□□□ 0.52
ALCAM-201ENST00000306107 GRIN2BQ13224 1484 aa18.28■□□□□ 0.52
ALCAM-201ENST00000306107 TIMELESSQ9UNS1 1208 aa18.26■□□□□ 0.51
ALCAM-201ENST00000306107 PRG4Q92954 1404 aaPredicted RBP18.26■□□□□ 0.51
ALCAM-201ENST00000306107 U2AF1L5P0DN76 240 aaPredicted RBP18.25■□□□□ 0.51
ALCAM-201ENST00000306107 AMPHP49418 695 aa18.25■□□□□ 0.51
ALCAM-201ENST00000306107 U2AF1Q01081 240 aaKnown RBP eCLIP18.25■□□□□ 0.51
ALCAM-201ENST00000306107 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.25■□□□□ 0.512e-7■■■□□ 18.7
ALCAM-201ENST00000306107 RAB3GAP2Q9H2M9 1393 aa18.25■□□□□ 0.51
ALCAM-201ENST00000306107 MRC2Q9UBG0 1479 aa18.25■□□□□ 0.51
ALCAM-201ENST00000306107 HSPA5P11021 654 aaKnown RBP18.25■□□□□ 0.51
ALCAM-201ENST00000306107 GOLGA2Q08379 1002 aa18.24■□□□□ 0.51
ALCAM-201ENST00000306107 L3MBTL2Q969R5 705 aa18.24■□□□□ 0.51
ALCAM-201ENST00000306107 OS9Q13438 667 aaPredicted RBP18.24■□□□□ 0.51
ALCAM-201ENST00000306107 ZNF644Q9H582 1327 aaPredicted RBP18.22■□□□□ 0.51
ALCAM-201ENST00000306107 EVA1CP58658 441 aa18.2■□□□□ 0.5
ALCAM-201ENST00000306107 MEX3CQ5U5Q3 659 aaKnown RBP18.18■□□□□ 0.5
ALCAM-201ENST00000306107 CFTRP13569 1480 aa18.18■□□□□ 0.5
ALCAM-201ENST00000306107 MINK1Q8N4C8 1332 aaPredicted RBP18.18■□□□□ 0.5
ALCAM-201ENST00000306107 EIF3AQ14152 1382 aaKnown RBP18.16■□□□□ 0.5
ALCAM-201ENST00000306107 ATF3P18847 181 aa18.16■□□□□ 0.5
ALCAM-201ENST00000306107 CCDC144AA2RUR9 1427 aa18.16■□□□□ 0.5
ALCAM-201ENST00000306107 IFT140Q96RY7 1462 aa18.15■□□□□ 0.5
ALCAM-201ENST00000306107 RAPGEF3O95398 923 aa18.15■□□□□ 0.5
ALCAM-201ENST00000306107 PSME1Q06323 249 aa18.14■□□□□ 0.49
ALCAM-201ENST00000306107 PHF23Q9BUL5 403 aaPredicted RBP18.13■□□□□ 0.49
ALCAM-201ENST00000306107 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.11■□□□□ 0.49
ALCAM-201ENST00000306107 TXNDC2Q86VQ3 553 aa18.1■□□□□ 0.49
ALCAM-201ENST00000306107 TMX4Q9H1E5 349 aaPredicted RBP18.1■□□□□ 0.49
ALCAM-201ENST00000306107 TAOK2Q9UL54 1235 aa18.09■□□□□ 0.49
ALCAM-201ENST00000306107 GTF2E1P29083 439 aaPredicted RBP18.08■□□□□ 0.49
ALCAM-201ENST00000306107 KTN1Q86UP2 1357 aaKnown RBP18.08■□□□□ 0.48
ALCAM-201ENST00000306107 MSH5O43196 834 aa18.08■□□□□ 0.48
ALCAM-201ENST00000306107 PROSER2Q86WR7 435 aaPredicted RBP18.07■□□□□ 0.48
ALCAM-201ENST00000306107 CHMP4BQ9H444 224 aaKnown RBP18.07■□□□□ 0.48
ALCAM-201ENST00000306107 ST20-MTHFSA0A0A6YYL1 179 aa18.06■□□□□ 0.48
ALCAM-201ENST00000306107 KIF15Q9NS87 1388 aa18.06■□□□□ 0.48
ALCAM-201ENST00000306107 TOPBP1Q92547 1522 aa18.06■□□□□ 0.48
ALCAM-201ENST00000306107 MS4A1P11836 297 aa18.05■□□□□ 0.48
ALCAM-201ENST00000306107 COG3Q96JB2 828 aa18.04■□□□□ 0.48
ALCAM-201ENST00000306107 SYNJ2O15056 1496 aa18.04■□□□□ 0.48
ALCAM-201ENST00000306107 SNAPC4Q5SXM2 1469 aa18.04■□□□□ 0.48
ALCAM-201ENST00000306107 UACAQ9BZF9 1416 aa18.04■□□□□ 0.48
ALCAM-201ENST00000306107 SUPT16HQ9Y5B9 1047 aaKnown RBP18.03■□□□□ 0.48
ALCAM-201ENST00000306107 EVC2Q86UK5 1308 aa18.03■□□□□ 0.48
ALCAM-201ENST00000306107 MYOM3Q5VTT5 1437 aa18.03■□□□□ 0.48
ALCAM-201ENST00000306107 SYTL4Q96C24 671 aaPredicted RBP18.03■□□□□ 0.48
ALCAM-201ENST00000306107 POLA1P09884 1462 aaPredicted RBP18.02■□□□□ 0.48
ALCAM-201ENST00000306107 THEMISQ8N1K5 641 aaPredicted RBP18.02■□□□□ 0.47
ALCAM-201ENST00000306107 CALD1Q05682 793 aaKnown RBP18.01■□□□□ 0.47
ALCAM-201ENST00000306107 KCNJ4P48050 445 aa18.01■□□□□ 0.47
ALCAM-201ENST00000306107 FGD1P98174 961 aa18■□□□□ 0.47
ALCAM-201ENST00000306107 STK31Q9BXU1 1019 aa18■□□□□ 0.47
ALCAM-201ENST00000306107 CASC1Q6TDU7 716 aa18■□□□□ 0.47
ALCAM-201ENST00000306107 ISY1Q9ULR0 285 aaKnown RBP18■□□□□ 0.47
ALCAM-201ENST00000306107 PRDM2Q13029 1718 aa17.99■□□□□ 0.47
ALCAM-201ENST00000306107 TULP1O00294 542 aaPredicted RBP17.99■□□□□ 0.47
ALCAM-201ENST00000306107 SCAPERQ9BY12 1400 aa17.99■□□□□ 0.47
ALCAM-201ENST00000306107 CHMP4AQ9BY43 222 aa17.99■□□□□ 0.47
ALCAM-201ENST00000306107 APBB1O00213 710 aa17.98■□□□□ 0.47
ALCAM-201ENST00000306107 RGS3P49796 1198 aa17.98■□□□□ 0.47
ALCAM-201ENST00000306107 CHMP3Q9Y3E7 222 aa17.98■□□□□ 0.47
ALCAM-201ENST00000306107 TMEM132EQ6IEE7 984 aa17.98■□□□□ 0.47
ALCAM-201ENST00000306107 ANP32BQ92688 251 aaKnown RBP17.98■□□□□ 0.47
ALCAM-201ENST00000306107 NUTM2GQ5VZR2 741 aa17.96■□□□□ 0.47
ALCAM-201ENST00000306107 HMGXB3Q12766 1538 aa17.96■□□□□ 0.47
ALCAM-201ENST00000306107 G3V3G9 751 aa17.96■□□□□ 0.47
ALCAM-201ENST00000306107 DCAF8Q5TAQ9 597 aa17.96■□□□□ 0.47
ALCAM-201ENST00000306107 ARHGAP5Q13017 1502 aa17.95■□□□□ 0.46
ALCAM-201ENST00000306107 USP35Q9P2H5 1018 aa17.95■□□□□ 0.46
ALCAM-201ENST00000306107 TAF7LQ5H9L4 462 aa17.95■□□□□ 0.46
ALCAM-201ENST00000306107 C1orf141Q5JVX7 400 aa17.94■□□□□ 0.46
ALCAM-201ENST00000306107 NAP1L2Q9ULW6 460 aaPredicted RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms