RNA–Protein interactions for RNA: ENST00000303757.12

LST1-202, leukocyte specific transcript 1, humanhuman

TSL 1 (best) BASIC

Gene LST1, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-202ENST00000303757 RIMS1Q86UR5 1692 aaKnown RBP26.81■■□□□ 1.88
LST1-202ENST00000303757 NEO1Q92859 1461 aa26.81■■□□□ 1.88
LST1-202ENST00000303757 SAMD1Q6SPF0 538 aaPredicted RBP26.79■■□□□ 1.88
LST1-202ENST00000303757 RANGAP1P46060 587 aaPredicted RBP26.78■■□□□ 1.88
LST1-202ENST00000303757 SAMD9Q5K651 1589 aa26.77■■□□□ 1.88
LST1-202ENST00000303757 LMTK3Q96Q04 1460 aa26.77■■□□□ 1.88
LST1-202ENST00000303757 SPINK5Q9NQ38 1064 aaPredicted RBP26.77■■□□□ 1.88
LST1-202ENST00000303757 EHMT2Q96KQ7 1210 aa26.75■■□□□ 1.87
LST1-202ENST00000303757 HSPA2P54652 639 aa26.72■■□□□ 1.87
LST1-202ENST00000303757 ARHGEF40Q8TER5 1519 aa26.7■■□□□ 1.87
LST1-202ENST00000303757 NUP153P49790 1475 aaKnown RBP26.7■■□□□ 1.87
LST1-202ENST00000303757 RICTORQ6R327 1708 aa26.7■■□□□ 1.86
LST1-202ENST00000303757 CSRNP3Q8WYN3 585 aa26.67■■□□□ 1.86
LST1-202ENST00000303757 DENND4BO75064 1496 aaPredicted RBP26.67■■□□□ 1.86
LST1-202ENST00000303757 APLP2Q06481 763 aa26.65■■□□□ 1.86
LST1-202ENST00000303757 SIGLEC1Q9BZZ2 1709 aa26.65■■□□□ 1.86
LST1-202ENST00000303757 FHOD3Q2V2M9 1422 aa26.65■■□□□ 1.86
LST1-202ENST00000303757 AKNAQ7Z591 1439 aa26.64■■□□□ 1.85
LST1-202ENST00000303757 CAPN15O75808 1086 aa26.61■■□□□ 1.85
LST1-202ENST00000303757 PLEKHD1A6NEE1 506 aa26.6■■□□□ 1.85
LST1-202ENST00000303757 MLECQ14165 292 aa26.6■■□□□ 1.85
LST1-202ENST00000303757 FANCAO15360 1455 aa26.6■■□□□ 1.85
LST1-202ENST00000303757 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.59■■□□□ 1.85
LST1-202ENST00000303757 TTC37Q6PGP7 1564 aa26.58■■□□□ 1.85
LST1-202ENST00000303757 YEATS2Q9ULM3 1422 aa26.57■■□□□ 1.84
LST1-202ENST00000303757 CFAP74Q9C0B2 1584 aa26.57■■□□□ 1.84
LST1-202ENST00000303757 ZFYVE16Q7Z3T8 1539 aa26.55■■□□□ 1.84
LST1-202ENST00000303757 FER1L4A9Z1Z3 1794 aa26.54■■□□□ 1.84
LST1-202ENST00000303757 POGZQ7Z3K3 1410 aa26.54■■□□□ 1.84
LST1-202ENST00000303757 ZMYM4Q5VZL5 1548 aa26.52■■□□□ 1.84
LST1-202ENST00000303757 HECW1Q76N89 1606 aa26.5■■□□□ 1.83
LST1-202ENST00000303757 EFCAB5A4FU69 1503 aa26.5■■□□□ 1.83
LST1-202ENST00000303757 CERKQ8TCT0 537 aa26.5■■□□□ 1.83
LST1-202ENST00000303757 CDK13Q14004 1512 aaKnown RBP26.46■■□□□ 1.83
LST1-202ENST00000303757 SCAPERQ9BY12 1400 aa26.43■■□□□ 1.82
LST1-202ENST00000303757 MAGI2Q86UL8 1455 aa26.41■■□□□ 1.82
LST1-202ENST00000303757 CEBPAP49715 358 aaPredicted RBP26.4■■□□□ 1.82
LST1-202ENST00000303757 ZNF219Q9P2Y4 722 aaPredicted RBP26.4■■□□□ 1.82
LST1-202ENST00000303757 PREX1Q8TCU6 1659 aa26.38■■□□□ 1.81
LST1-202ENST00000303757 ATF5Q9Y2D1 282 aaPredicted RBP26.37■■□□□ 1.81
LST1-202ENST00000303757 ATP1B4Q9UN42 357 aaPredicted RBP26.36■■□□□ 1.81
LST1-202ENST00000303757 ARHGEF12Q9NZN5 1544 aa26.35■■□□□ 1.81
LST1-202ENST00000303757 PLCH2O75038 1416 aa26.35■■□□□ 1.81
LST1-202ENST00000303757 ATP10AO60312 1499 aa26.35■■□□□ 1.81
LST1-202ENST00000303757 MYO5CQ9NQX4 1742 aa26.34■■□□□ 1.81
LST1-202ENST00000303757 DSG3P32926 999 aa26.32■■□□□ 1.8
LST1-202ENST00000303757 C9orf84Q5VXU9 1444 aa26.31■■□□□ 1.8
LST1-202ENST00000303757 STRCQ7RTU9 1775 aa26.31■■□□□ 1.8
LST1-202ENST00000303757 EEA1Q15075 1411 aa26.31■■□□□ 1.8
LST1-202ENST00000303757 DISP3Q9P2K9 1392 aa26.3■■□□□ 1.8
LST1-202ENST00000303757 ILDR2Q71H61 639 aa26.29■■□□□ 1.8
LST1-202ENST00000303757 ATXN8OSP0DMR3 200 aa26.28■■□□□ 1.8
LST1-202ENST00000303757 EFCAB2Q5VUJ9 269 aa26.27■■□□□ 1.8
LST1-202ENST00000303757 KIF14Q15058 1648 aa26.26■■□□□ 1.79
LST1-202ENST00000303757 MYT1LQ9UL68 1186 aa26.26■■□□□ 1.79
LST1-202ENST00000303757 AFAP1Q8N556 730 aa26.22■■□□□ 1.79
LST1-202ENST00000303757 UHRF1BP1Q6BDS2 1440 aa26.2■■□□□ 1.78
LST1-202ENST00000303757 ARHGAP5Q13017 1502 aa26.19■■□□□ 1.78
LST1-202ENST00000303757 SETD1BQ9UPS6 1966 aaKnown RBP26.19■■□□□ 1.78
LST1-202ENST00000303757 ZNF518AQ6AHZ1 1483 aa26.18■■□□□ 1.78
LST1-202ENST00000303757 DIP2CQ9Y2E4 1556 aa26.17■■□□□ 1.78
LST1-202ENST00000303757 KDM5CP41229 1560 aa26.16■■□□□ 1.78
LST1-202ENST00000303757 C3P01024 1663 aa26.15■■□□□ 1.78
LST1-202ENST00000303757 UBTFP17480 764 aaKnown RBP26.15■■□□□ 1.78
LST1-202ENST00000303757 LRRIQ1Q96JM4 1722 aa26.14■■□□□ 1.77
LST1-202ENST00000303757 ABCA6Q8N139 1617 aa26.14■■□□□ 1.77
LST1-202ENST00000303757 CDK11AQ9UQ88 783 aaPredicted RBP26.13■■□□□ 1.77
LST1-202ENST00000303757 FMN1Q68DA7 1419 aa26.13■■□□□ 1.77
LST1-202ENST00000303757 SOCS7O14512 581 aa26.12■■□□□ 1.77
LST1-202ENST00000303757 ARHGAP35Q9NRY4 1499 aa26.11■■□□□ 1.77
LST1-202ENST00000303757 CDC42BPBQ9Y5S2 1711 aa26.11■■□□□ 1.77
LST1-202ENST00000303757 ABCB7O75027 752 aa26.1■■□□□ 1.77
LST1-202ENST00000303757 TROQ12816 1431 aaPredicted RBP26.1■■□□□ 1.77
LST1-202ENST00000303757 SPATA31D1Q6ZQQ2 1576 aa26.08■■□□□ 1.77
LST1-202ENST00000303757 ESF1Q9H501 851 aaKnown RBP26.06■■□□□ 1.76
LST1-202ENST00000303757 CLIP1P30622 1438 aa26.05■■□□□ 1.76
LST1-202ENST00000303757 PTPRTO14522 1441 aa26.05■■□□□ 1.76
LST1-202ENST00000303757 REREQ9P2R6 1566 aa26.04■■□□□ 1.76
LST1-202ENST00000303757 TRAPPC8Q9Y2L5 1435 aa26.04■■□□□ 1.76
LST1-202ENST00000303757 LTBP4Q8N2S1 1624 aa26.02■■□□□ 1.76
LST1-202ENST00000303757 ITSN2Q9NZM3 1697 aa26.02■■□□□ 1.76
LST1-202ENST00000303757 MLH3Q9UHC1 1453 aa26.01■■□□□ 1.75
LST1-202ENST00000303757 PREX2Q70Z35 1606 aa26■■□□□ 1.75
LST1-202ENST00000303757 ABCC1P33527 1531 aa25.99■■□□□ 1.75
LST1-202ENST00000303757 KIDINS220Q9ULH0 1771 aa25.99■■□□□ 1.75
LST1-202ENST00000303757 AGLP35573 1532 aa25.98■■□□□ 1.75
LST1-202ENST00000303757 NCOA1Q15788 1441 aa25.95■■□□□ 1.74
LST1-202ENST00000303757 CDC42BPAQ5VT25 1732 aa25.93■■□□□ 1.74
LST1-202ENST00000303757 CAMSAP1Q5T5Y3 1602 aa25.92■■□□□ 1.74
LST1-202ENST00000303757 POLA2Q14181 598 aa25.92■■□□□ 1.74
LST1-202ENST00000303757 ZNF777Q9ULD5 760 aaPredicted RBP25.9■■□□□ 1.74
LST1-202ENST00000303757 SUPT6HQ7KZ85 1726 aaKnown RBP25.9■■□□□ 1.74
LST1-202ENST00000303757 NCKAP5LQ9HCH0 1330 aa25.89■■□□□ 1.74
LST1-202ENST00000303757 CNTLNQ9NXG0 1405 aa25.88■■□□□ 1.73
LST1-202ENST00000303757 IQSEC2Q5JU85 1478 aa25.86■■□□□ 1.73
LST1-202ENST00000303757 SAMD9LQ8IVG5 1584 aa25.86■■□□□ 1.73
LST1-202ENST00000303757 ZNF335Q9H4Z2 1342 aaPredicted RBP25.86■■□□□ 1.73
LST1-202ENST00000303757 MROH2AA6NES4 1674 aa25.85■■□□□ 1.73
LST1-202ENST00000303757 CLTCQ00610 1675 aaKnown RBP25.84■■□□□ 1.73
LST1-202ENST00000303757 ZMYM3Q14202 1370 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms