RNA–Protein interactions for RNA: ENST00000302392.4

TMEM42-201, Transcript of transmembrane protein 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM42, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM42-201ENST00000302392 ILDR2Q71H61 639 aa29.12■■■□□ 2.25
TMEM42-201ENST00000302392 STRCQ7RTU9 1775 aa29.09■■■□□ 2.25
TMEM42-201ENST00000302392 SOCS7O14512 581 aa29.09■■■□□ 2.25
TMEM42-201ENST00000302392 C9orf84Q5VXU9 1444 aa29.09■■■□□ 2.25
TMEM42-201ENST00000302392 RANGAP1P46060 587 aaPredicted RBP29.08■■■□□ 2.25
TMEM42-201ENST00000302392 SCAPERQ9BY12 1400 aa29.08■■■□□ 2.25
TMEM42-201ENST00000302392 SPATA31D1Q6ZQQ2 1576 aa29.08■■■□□ 2.25
TMEM42-201ENST00000302392 ATP10AO60312 1499 aa29.06■■■□□ 2.24
TMEM42-201ENST00000302392 CDK13Q14004 1512 aaKnown RBP29.05■■■□□ 2.24
TMEM42-201ENST00000302392 CSRNP3Q8WYN3 585 aa29.05■■■□□ 2.24
TMEM42-201ENST00000302392 PLCH2O75038 1416 aa29.02■■■□□ 2.24
TMEM42-201ENST00000302392 MYO5CQ9NQX4 1742 aa29.01■■■□□ 2.23
TMEM42-201ENST00000302392 UHRF1BP1Q6BDS2 1440 aa29.01■■■□□ 2.23
TMEM42-201ENST00000302392 DMRT2Q9Y5R5 561 aa28.99■■■□□ 2.23
TMEM42-201ENST00000302392 CEBPAP49715 358 aaPredicted RBP28.97■■■□□ 2.23
TMEM42-201ENST00000302392 SETD1BQ9UPS6 1966 aaKnown RBP28.93■■■□□ 2.22
TMEM42-201ENST00000302392 ZNF518AQ6AHZ1 1483 aa28.92■■■□□ 2.22
TMEM42-201ENST00000302392 KDM5CP41229 1560 aa28.92■■■□□ 2.22
TMEM42-201ENST00000302392 EEA1Q15075 1411 aa28.9■■■□□ 2.22
TMEM42-201ENST00000302392 PTPRTO14522 1441 aa28.89■■■□□ 2.22
TMEM42-201ENST00000302392 C3P01024 1663 aa28.89■■■□□ 2.21
TMEM42-201ENST00000302392 DIP2CQ9Y2E4 1556 aa28.88■■■□□ 2.21
TMEM42-201ENST00000302392 KIF14Q15058 1648 aa28.87■■■□□ 2.21
TMEM42-201ENST00000302392 EFCAB2Q5VUJ9 269 aa28.86■■■□□ 2.21
TMEM42-201ENST00000302392 REREQ9P2R6 1566 aa28.86■■■□□ 2.21
TMEM42-201ENST00000302392 ARHGAP5Q13017 1502 aa28.83■■■□□ 2.21
TMEM42-201ENST00000302392 ABCA6Q8N139 1617 aa28.83■■■□□ 2.21
TMEM42-201ENST00000302392 LTBP4Q8N2S1 1624 aa28.83■■■□□ 2.21
TMEM42-201ENST00000302392 IQSEC2Q5JU85 1478 aa28.82■■■□□ 2.2
TMEM42-201ENST00000302392 AFAP1Q8N556 730 aa28.75■■■□□ 2.19
TMEM42-201ENST00000302392 MYT1LQ9UL68 1186 aa28.75■■■□□ 2.19
TMEM42-201ENST00000302392 NCOA1Q15788 1441 aa28.74■■■□□ 2.19
TMEM42-201ENST00000302392 FMN1Q68DA7 1419 aa28.74■■■□□ 2.19
TMEM42-201ENST00000302392 AGLP35573 1532 aa28.74■■■□□ 2.19
TMEM42-201ENST00000302392 TROQ12816 1431 aaPredicted RBP28.72■■■□□ 2.19
TMEM42-201ENST00000302392 MLH3Q9UHC1 1453 aa28.72■■■□□ 2.19
TMEM42-201ENST00000302392 TRAPPC8Q9Y2L5 1435 aa28.71■■■□□ 2.19
TMEM42-201ENST00000302392 ATP1B4Q9UN42 357 aaPredicted RBP28.71■■■□□ 2.19
TMEM42-201ENST00000302392 CDK11AQ9UQ88 783 aaPredicted RBP28.71■■■□□ 2.19
TMEM42-201ENST00000302392 CDC42BPBQ9Y5S2 1711 aa28.7■■■□□ 2.19
TMEM42-201ENST00000302392 CLIP1P30622 1438 aa28.69■■■□□ 2.18
TMEM42-201ENST00000302392 ESF1Q9H501 851 aaKnown RBP28.69■■■□□ 2.18
TMEM42-201ENST00000302392 ABCC1P33527 1531 aa28.68■■■□□ 2.18
TMEM42-201ENST00000302392 ITSN2Q9NZM3 1697 aa28.67■■■□□ 2.18
TMEM42-201ENST00000302392 PREX2Q70Z35 1606 aa28.66■■■□□ 2.18
TMEM42-201ENST00000302392 CNTLNQ9NXG0 1405 aa28.66■■■□□ 2.18
TMEM42-201ENST00000302392 CAMSAP1Q5T5Y3 1602 aa28.65■■■□□ 2.18
TMEM42-201ENST00000302392 LRRIQ1Q96JM4 1722 aa28.64■■■□□ 2.18
TMEM42-201ENST00000302392 MROH2AA6NES4 1674 aa28.63■■■□□ 2.17
TMEM42-201ENST00000302392 KIDINS220Q9ULH0 1771 aa28.62■■■□□ 2.17
TMEM42-201ENST00000302392 ARHGAP35Q9NRY4 1499 aa28.61■■■□□ 2.17
TMEM42-201ENST00000302392 NPATQ14207 1427 aa28.58■■■□□ 2.17
TMEM42-201ENST00000302392 ZNF142P52746 1687 aaPredicted RBP28.54■■■□□ 2.16
TMEM42-201ENST00000302392 MYO3AQ8NEV4 1616 aa28.53■■■□□ 2.16
TMEM42-201ENST00000302392 SUPT6HQ7KZ85 1726 aaKnown RBP28.52■■■□□ 2.16
TMEM42-201ENST00000302392 ZNF335Q9H4Z2 1342 aaPredicted RBP28.5■■■□□ 2.15
TMEM42-201ENST00000302392 UBAP1LF5GYI3 381 aa28.5■■■□□ 2.15
TMEM42-201ENST00000302392 CDC42BPAQ5VT25 1732 aa28.49■■■□□ 2.15
TMEM42-201ENST00000302392 SAMD9LQ8IVG5 1584 aa28.48■■■□□ 2.15
TMEM42-201ENST00000302392 PLA2R1Q13018 1463 aa28.47■■■□□ 2.15
TMEM42-201ENST00000302392 NCKAP5LQ9HCH0 1330 aa28.46■■■□□ 2.15
TMEM42-201ENST00000302392 CLTCQ00610 1675 aaKnown RBP28.46■■■□□ 2.15
TMEM42-201ENST00000302392 UBTFP17480 764 aaKnown RBP28.46■■■□□ 2.15
TMEM42-201ENST00000302392 CEP170BQ9Y4F5 1589 aaPredicted RBP28.45■■■□□ 2.15
TMEM42-201ENST00000302392 EHMT2Q96KQ7 1210 aa28.45■■■□□ 2.14
TMEM42-201ENST00000302392 ZMYM3Q14202 1370 aa28.44■■■□□ 2.14
TMEM42-201ENST00000302392 CCDC18Q5T9S5 1454 aa28.44■■■□□ 2.14
TMEM42-201ENST00000302392 TCOF1Q13428 1488 aaKnown RBP28.42■■■□□ 2.14
TMEM42-201ENST00000302392 SYCP2Q9BX26 1530 aa28.42■■■□□ 2.14
TMEM42-201ENST00000302392 PLXNC1O60486 1568 aa28.39■■■□□ 2.14
TMEM42-201ENST00000302392 PKD2Q13563 968 aa28.39■■■□□ 2.14
TMEM42-201ENST00000302392 MED1Q15648 1581 aaPredicted RBP28.39■■■□□ 2.14
TMEM42-201ENST00000302392 ATP7AQ04656 1500 aa28.37■■■□□ 2.13
TMEM42-201ENST00000302392 INO80Q9ULG1 1556 aaPredicted RBP28.35■■■□□ 2.13
TMEM42-201ENST00000302392 PTPRKQ15262 1439 aa28.35■■■□□ 2.13
TMEM42-201ENST00000302392 CASKIN1Q8WXD9 1431 aa28.33■■■□□ 2.13
TMEM42-201ENST00000302392 SPAG9O60271 1321 aaKnown RBP28.32■■■□□ 2.12
TMEM42-201ENST00000302392 PPP6R1Q9UPN7 881 aa28.31■■■□□ 2.12
TMEM42-201ENST00000302392 A2MP01023 1474 aa28.29■■■□□ 2.12
TMEM42-201ENST00000302392 ZNF777Q9ULD5 760 aaPredicted RBP28.29■■■□□ 2.12
TMEM42-201ENST00000302392 POLR1AO95602 1720 aaPredicted RBP28.29■■■□□ 2.12
TMEM42-201ENST00000302392 SCAF1Q9H7N4 1312 aaKnown RBP28.26■■■□□ 2.11
TMEM42-201ENST00000302392 DNMT1P26358 1616 aaKnown RBP28.25■■■□□ 2.11
TMEM42-201ENST00000302392 A2ML1A8K2U0 1454 aa28.25■■■□□ 2.11
TMEM42-201ENST00000302392 HSPA1LP34931 641 aa28.24■■■□□ 2.11
TMEM42-201ENST00000302392 CPS1P31327 1500 aa28.23■■■□□ 2.11
TMEM42-201ENST00000302392 GPATCH8Q9UKJ3 1502 aaKnown RBP28.23■■■□□ 2.11
TMEM42-201ENST00000302392 ADGBQ8N7X0 1667 aa28.23■■■□□ 2.11
TMEM42-201ENST00000302392 FYCO1Q9BQS8 1478 aa28.23■■■□□ 2.11
TMEM42-201ENST00000302392 PLEKHH2Q8IVE3 1493 aa28.22■■■□□ 2.11
TMEM42-201ENST00000302392 NEURL4Q96JN8 1562 aa28.21■■■□□ 2.11
TMEM42-201ENST00000302392 KIAA1107Q9UPP5 1409 aa28.21■■■□□ 2.11
TMEM42-201ENST00000302392 HNRNPMP52272 730 aaKnown RBP eCLIP28.21■■■□□ 2.11
TMEM42-201ENST00000302392 GGT6Q6P531 493 aa28.2■■■□□ 2.1
TMEM42-201ENST00000302392 PIP4K2BP78356 416 aa28.19■■■□□ 2.1
TMEM42-201ENST00000302392 TOM1O60784 492 aa28.16■■■□□ 2.1
TMEM42-201ENST00000302392 SHANK2Q9UPX8 1470 aa28.15■■■□□ 2.1
TMEM42-201ENST00000302392 PHF23Q9BUL5 403 aaPredicted RBP28.1■■■□□ 2.09
TMEM42-201ENST00000302392 CFDP1Q9UEE9 299 aaPredicted RBP28.1■■■□□ 2.09
TMEM42-201ENST00000302392 VWDEQ8N2E2 1590 aa28.08■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms