RNA–Protein interactions for RNA: ENST00000301904.3

SCARA3-201, Transcript of scavenger receptor class A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARA3, Length 3,510 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARA3-201ENST00000301904 AEBP2Q6ZN18 517 aaPredicted RBP13.84□□□□□ -0.19
SCARA3-201ENST00000301904 RRP1P56182 461 aaKnown RBP13.83□□□□□ -0.2
SCARA3-201ENST00000301904 DCAF11Q8TEB1 546 aa13.83□□□□□ -0.2
SCARA3-201ENST00000301904 ATAD2BQ9ULI0 1458 aa13.83□□□□□ -0.2
SCARA3-201ENST00000301904 AMER1Q5JTC6 1135 aaPredicted RBP13.82□□□□□ -0.2
SCARA3-201ENST00000301904 BICRAQ9NZM4 1560 aa13.81□□□□□ -0.2
SCARA3-201ENST00000301904 UNC13AQ9UPW8 1703 aa13.81□□□□□ -0.2
SCARA3-201ENST00000301904 IGF1RP08069 1367 aa13.81□□□□□ -0.2
SCARA3-201ENST00000301904 MTUS2Q5JR59 1369 aa13.81□□□□□ -0.2
SCARA3-201ENST00000301904 CARMIL1Q5VZK9 1371 aa13.8□□□□□ -0.2
SCARA3-201ENST00000301904 CUX1P39880 1505 aa13.8□□□□□ -0.2
SCARA3-201ENST00000301904 CDCA7LQ96GN5 454 aa13.8□□□□□ -0.2
SCARA3-201ENST00000301904 RNF123Q5XPI4 1314 aa13.8□□□□□ -0.2
SCARA3-201ENST00000301904 RCAN3Q9UKA8 241 aa13.8□□□□□ -0.2
SCARA3-201ENST00000301904 KDM5BQ9UGL1 1544 aa13.8□□□□□ -0.2
SCARA3-201ENST00000301904 MPHOSPH9Q99550 1183 aa13.8□□□□□ -0.2
SCARA3-201ENST00000301904 FGD6Q6ZV73 1430 aa13.79□□□□□ -0.2
SCARA3-201ENST00000301904 NAIPQ13075 1403 aa13.78□□□□□ -0.2
SCARA3-201ENST00000301904 NCOA1Q15788 1441 aa13.78□□□□□ -0.2
SCARA3-201ENST00000301904 NCOA2Q15596 1464 aa13.78□□□□□ -0.2
SCARA3-201ENST00000301904 PNISRQ8TF01 805 aaKnown RBP13.77□□□□□ -0.2
SCARA3-201ENST00000301904 RBM10P98175 930 aaKnown RBP13.77□□□□□ -0.21
SCARA3-201ENST00000301904 PCF11O94913 1555 aaKnown RBP13.76□□□□□ -0.21
SCARA3-201ENST00000301904 CRBNQ96SW2 442 aa13.76□□□□□ -0.21
SCARA3-201ENST00000301904 HSP90AA1P07900 732 aaKnown RBP13.76□□□□□ -0.21
SCARA3-201ENST00000301904 RGS3P49796 1198 aa13.75□□□□□ -0.21
SCARA3-201ENST00000301904 PEG3Q9GZU2 1588 aa13.75□□□□□ -0.21
SCARA3-201ENST00000301904 HFM1A2PYH4 1435 aa13.74□□□□□ -0.21
SCARA3-201ENST00000301904 NCAPD3P42695 1498 aa13.74□□□□□ -0.21
SCARA3-201ENST00000301904 FMN1Q68DA7 1419 aa13.74□□□□□ -0.21
SCARA3-201ENST00000301904 DDRGK1Q96HY6 314 aa13.74□□□□□ -0.21
SCARA3-201ENST00000301904 BCL11BQ9C0K0 894 aaPredicted RBP13.73□□□□□ -0.21
SCARA3-201ENST00000301904 C20orf194Q5TEA3 1177 aa13.72□□□□□ -0.21
SCARA3-201ENST00000301904 ARID3AQ99856 593 aa13.72□□□□□ -0.21
SCARA3-201ENST00000301904 PTPN23Q9H3S7 1636 aa13.72□□□□□ -0.21
SCARA3-201ENST00000301904 BIVM-ERCC5R4GMW8 1640 aa13.71□□□□□ -0.21
SCARA3-201ENST00000301904 POGKQ9P215 609 aa13.71□□□□□ -0.21
SCARA3-201ENST00000301904 RRAGDQ9NQL2 400 aaPredicted RBP13.7□□□□□ -0.22
SCARA3-201ENST00000301904 MS4A1P11836 297 aa13.69□□□□□ -0.22
SCARA3-201ENST00000301904 SLC4A1APQ9BWU0 796 aaKnown RBP13.69□□□□□ -0.22
SCARA3-201ENST00000301904 MAP3K1Q13233 1512 aa13.69□□□□□ -0.22
SCARA3-201ENST00000301904 DHX29Q7Z478 1369 aaKnown RBP13.68□□□□□ -0.22
SCARA3-201ENST00000301904 SLKQ9H2G2 1235 aaPredicted RBP13.68□□□□□ -0.22
SCARA3-201ENST00000301904 KDM2AQ9Y2K7 1162 aa13.68□□□□□ -0.22
SCARA3-201ENST00000301904 PDIA4P13667 645 aaKnown RBP13.67□□□□□ -0.22
SCARA3-201ENST00000301904 DNAJC5BQ9UF47 199 aa13.67□□□□□ -0.22
SCARA3-201ENST00000301904 FAM43AQ8N2R8 423 aa13.67□□□□□ -0.22
SCARA3-201ENST00000301904 DENND4BO75064 1496 aaPredicted RBP13.66□□□□□ -0.22
SCARA3-201ENST00000301904 SPRYD3Q8NCJ5 442 aa13.65□□□□□ -0.22
SCARA3-201ENST00000301904 GZF1Q9H116 711 aaPredicted RBP13.64□□□□□ -0.23
SCARA3-201ENST00000301904 CFTRP13569 1480 aa13.64□□□□□ -0.23
SCARA3-201ENST00000301904 PNNQ9H307 717 aaKnown RBP13.63□□□□□ -0.23
SCARA3-201ENST00000301904 KDM6BO15054 1643 aa13.62□□□□□ -0.23
SCARA3-201ENST00000301904 CC2D1BQ5T0F9 858 aaKnown RBP13.61□□□□□ -0.23
SCARA3-201ENST00000301904 USP47Q96K76 1375 aa13.61□□□□□ -0.23
SCARA3-201ENST00000301904 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.61□□□□□ -0.23
SCARA3-201ENST00000301904 CASKIN1Q8WXD9 1431 aa13.6□□□□□ -0.23
SCARA3-201ENST00000301904 CFAP43Q8NDM7 1665 aa13.59□□□□□ -0.23
SCARA3-201ENST00000301904 C8orf34Q49A92 452 aa13.59□□□□□ -0.23
SCARA3-201ENST00000301904 MYOM3Q5VTT5 1437 aa13.59□□□□□ -0.23
SCARA3-201ENST00000301904 FGD1P98174 961 aa13.59□□□□□ -0.23
SCARA3-201ENST00000301904 CARD11Q9BXL7 1154 aa13.59□□□□□ -0.23
SCARA3-201ENST00000301904 ST20-MTHFSA0A0A6YYL1 179 aa13.58□□□□□ -0.24
SCARA3-201ENST00000301904 FAM161AQ3B820 660 aa13.58□□□□□ -0.24
SCARA3-201ENST00000301904 SPATA31E1Q6ZUB1 1445 aa13.58□□□□□ -0.24
SCARA3-201ENST00000301904 ZNF644Q9H582 1327 aaPredicted RBP13.57□□□□□ -0.24
SCARA3-201ENST00000301904 PANK2Q9BZ23 570 aa13.56□□□□□ -0.24
SCARA3-201ENST00000301904 FYCO1Q9BQS8 1478 aa13.56□□□□□ -0.24
SCARA3-201ENST00000301904 MYBBP1AQ9BQG0 1328 aaKnown RBP13.56□□□□□ -0.24
SCARA3-201ENST00000301904 FGD5Q6ZNL6 1462 aa13.55□□□□□ -0.24
SCARA3-201ENST00000301904 ANKRD30BQ9BXX2 1392 aa13.55□□□□□ -0.24
SCARA3-201ENST00000301904 SEC24BO95487 1268 aa13.54□□□□□ -0.24
SCARA3-201ENST00000301904 AAMPQ13685 434 aa13.54□□□□□ -0.24
SCARA3-201ENST00000301904 KIF15Q9NS87 1388 aa13.51□□□□□ -0.25
SCARA3-201ENST00000301904 PAXIP1Q6ZW49 1069 aaPredicted RBP13.51□□□□□ -0.25
SCARA3-201ENST00000301904 ZNF777Q9ULD5 760 aaPredicted RBP13.51□□□□□ -0.25
SCARA3-201ENST00000301904 LRPPRCP42704 1394 aaKnown RBP13.5□□□□□ -0.25
SCARA3-201ENST00000301904 PKD2Q13563 968 aa13.5□□□□□ -0.25
SCARA3-201ENST00000301904 RAD54L2Q9Y4B4 1467 aa13.5□□□□□ -0.25
SCARA3-201ENST00000301904 KTN1Q86UP2 1357 aaKnown RBP13.49□□□□□ -0.25
SCARA3-201ENST00000301904 RPRD2Q5VT52 1461 aaKnown RBP13.49□□□□□ -0.25
SCARA3-201ENST00000301904 BCORL1Q5H9F3 1711 aa13.49□□□□□ -0.25
SCARA3-201ENST00000301904 XRCC6P12956 609 aaKnown RBP eCLIP13.49□□□□□ -0.25
SCARA3-201ENST00000301904 CENPQQ7L2Z9 268 aaPredicted RBP13.49□□□□□ -0.25
SCARA3-201ENST00000301904 TEX14Q8IWB6 1497 aa13.48□□□□□ -0.25
SCARA3-201ENST00000301904 BBXQ8WY36 941 aaPredicted RBP13.48□□□□□ -0.25
SCARA3-201ENST00000301904 KDM2BQ8NHM5 1336 aa13.48□□□□□ -0.25
SCARA3-201ENST00000301904 NLRP13Q86W25 1043 aa13.48□□□□□ -0.25
SCARA3-201ENST00000301904 RALBP1Q15311 655 aa13.48□□□□□ -0.25
SCARA3-201ENST00000301904 BRD4O60885 1362 aaPredicted RBP13.48□□□□□ -0.25
SCARA3-201ENST00000301904 PDE3BQ13370 1112 aa13.47□□□□□ -0.25
SCARA3-201ENST00000301904 CC2D2AQ9P2K1 1620 aa13.47□□□□□ -0.25
SCARA3-201ENST00000301904 RRP9O43818 475 aaKnown RBP13.46□□□□□ -0.25
SCARA3-201ENST00000301904 CHMP4BQ9H444 224 aaKnown RBP13.45□□□□□ -0.26
SCARA3-201ENST00000301904 ADAMTS8Q9UP79 889 aa13.45□□□□□ -0.26
SCARA3-201ENST00000301904 GOLGA6L3A6NEY3 463 aa13.44□□□□□ -0.26
SCARA3-201ENST00000301904 RGL3Q3MIN7 710 aa13.44□□□□□ -0.26
SCARA3-201ENST00000301904 IGHDP01880 384 aa13.44□□□□□ -0.26
SCARA3-201ENST00000301904 L1TD1Q5T7N2 865 aaKnown RBP13.44□□□□□ -0.26
SCARA3-201ENST00000301904 CCDC146Q8IYE0 955 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms