RNA–Protein interactions for RNA: ENST00000300880.11

BBC3-201, Transcript of BCL2 binding component 3, humanhuman

TSL 1 (best) BASIC

Gene BBC3, Length 1,347 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBC3-201ENST00000300880 PREX1Q8TCU6 1659 aa29.67■■■□□ 2.34
BBC3-201ENST00000300880 RANGAP1P46060 587 aaPredicted RBP29.65■■■□□ 2.34
BBC3-201ENST00000300880 MAGI2Q86UL8 1455 aa29.64■■■□□ 2.34
BBC3-201ENST00000300880 ARHGEF12Q9NZN5 1544 aa29.64■■■□□ 2.34
BBC3-201ENST00000300880 SOCS7O14512 581 aa29.63■■■□□ 2.33
BBC3-201ENST00000300880 CEBPAP49715 358 aaPredicted RBP29.6■■■□□ 2.33
BBC3-201ENST00000300880 CSRNP3Q8WYN3 585 aa29.59■■■□□ 2.33
BBC3-201ENST00000300880 SCAPERQ9BY12 1400 aa29.57■■■□□ 2.32
BBC3-201ENST00000300880 ATP10AO60312 1499 aa29.55■■■□□ 2.32
BBC3-201ENST00000300880 CDK13Q14004 1512 aaKnown RBP29.54■■■□□ 2.32
BBC3-201ENST00000300880 PLCH2O75038 1416 aa29.51■■■□□ 2.32
BBC3-201ENST00000300880 SETD1BQ9UPS6 1966 aaKnown RBP29.5■■■□□ 2.31
BBC3-201ENST00000300880 C9orf84Q5VXU9 1444 aa29.5■■■□□ 2.31
BBC3-201ENST00000300880 SPATA31D1Q6ZQQ2 1576 aa29.48■■■□□ 2.31
BBC3-201ENST00000300880 MYO5CQ9NQX4 1742 aa29.45■■■□□ 2.31
BBC3-201ENST00000300880 DMRT2Q9Y5R5 561 aa29.41■■■□□ 2.3
BBC3-201ENST00000300880 UHRF1BP1Q6BDS2 1440 aa29.4■■■□□ 2.3
BBC3-201ENST00000300880 C3P01024 1663 aa29.4■■■□□ 2.3
BBC3-201ENST00000300880 LTBP4Q8N2S1 1624 aa29.38■■■□□ 2.29
BBC3-201ENST00000300880 KIF14Q15058 1648 aa29.37■■■□□ 2.29
BBC3-201ENST00000300880 KDM5CP41229 1560 aa29.35■■■□□ 2.29
BBC3-201ENST00000300880 PTPRTO14522 1441 aa29.35■■■□□ 2.29
BBC3-201ENST00000300880 DIP2CQ9Y2E4 1556 aa29.34■■■□□ 2.29
BBC3-201ENST00000300880 EFCAB2Q5VUJ9 269 aa29.33■■■□□ 2.29
BBC3-201ENST00000300880 AFAP1Q8N556 730 aa29.33■■■□□ 2.29
BBC3-201ENST00000300880 ZNF518AQ6AHZ1 1483 aa29.3■■■□□ 2.28
BBC3-201ENST00000300880 ABCA6Q8N139 1617 aa29.3■■■□□ 2.28
BBC3-201ENST00000300880 REREQ9P2R6 1566 aa29.27■■■□□ 2.28
BBC3-201ENST00000300880 CDC42BPBQ9Y5S2 1711 aa29.25■■■□□ 2.27
BBC3-201ENST00000300880 LRRIQ1Q96JM4 1722 aa29.24■■■□□ 2.27
BBC3-201ENST00000300880 ARHGAP5Q13017 1502 aa29.24■■■□□ 2.27
BBC3-201ENST00000300880 EEA1Q15075 1411 aa29.23■■■□□ 2.27
BBC3-201ENST00000300880 ATP1B4Q9UN42 357 aaPredicted RBP29.2■■■□□ 2.27
BBC3-201ENST00000300880 NCOA1Q15788 1441 aa29.2■■■□□ 2.27
BBC3-201ENST00000300880 IQSEC2Q5JU85 1478 aa29.2■■■□□ 2.26
BBC3-201ENST00000300880 TRAPPC8Q9Y2L5 1435 aa29.18■■■□□ 2.26
BBC3-201ENST00000300880 MYT1LQ9UL68 1186 aa29.18■■■□□ 2.26
BBC3-201ENST00000300880 AGLP35573 1532 aa29.17■■■□□ 2.26
BBC3-201ENST00000300880 MLH3Q9UHC1 1453 aa29.17■■■□□ 2.26
BBC3-201ENST00000300880 TROQ12816 1431 aaPredicted RBP29.15■■■□□ 2.26
BBC3-201ENST00000300880 KIDINS220Q9ULH0 1771 aa29.14■■■□□ 2.26
BBC3-201ENST00000300880 ITSN2Q9NZM3 1697 aa29.12■■■□□ 2.25
BBC3-201ENST00000300880 CAMSAP1Q5T5Y3 1602 aa29.12■■■□□ 2.25
BBC3-201ENST00000300880 ARHGAP35Q9NRY4 1499 aa29.11■■■□□ 2.25
BBC3-201ENST00000300880 FMN1Q68DA7 1419 aa29.1■■■□□ 2.25
BBC3-201ENST00000300880 ABCC1P33527 1531 aa29.1■■■□□ 2.25
BBC3-201ENST00000300880 PREX2Q70Z35 1606 aa29.08■■■□□ 2.25
BBC3-201ENST00000300880 CDK11AQ9UQ88 783 aaPredicted RBP29.08■■■□□ 2.25
BBC3-201ENST00000300880 ZNF335Q9H4Z2 1342 aaPredicted RBP29.06■■■□□ 2.24
BBC3-201ENST00000300880 EHMT2Q96KQ7 1210 aa29.05■■■□□ 2.24
BBC3-201ENST00000300880 ESF1Q9H501 851 aaKnown RBP29.05■■■□□ 2.24
BBC3-201ENST00000300880 NCKAP5LQ9HCH0 1330 aa29.05■■■□□ 2.24
BBC3-201ENST00000300880 MROH2AA6NES4 1674 aa29.04■■■□□ 2.24
BBC3-201ENST00000300880 CLIP1P30622 1438 aa29.02■■■□□ 2.24
BBC3-201ENST00000300880 CNTLNQ9NXG0 1405 aa29.02■■■□□ 2.24
BBC3-201ENST00000300880 CDC42BPAQ5VT25 1732 aa29■■■□□ 2.23
BBC3-201ENST00000300880 UBAP1LF5GYI3 381 aa28.99■■■□□ 2.23
BBC3-201ENST00000300880 NPATQ14207 1427 aa28.98■■■□□ 2.23
BBC3-201ENST00000300880 SUPT6HQ7KZ85 1726 aaKnown RBP28.98■■■□□ 2.23
BBC3-201ENST00000300880 ZNF142P52746 1687 aaPredicted RBP28.95■■■□□ 2.23
BBC3-201ENST00000300880 CLTCQ00610 1675 aaKnown RBP28.95■■■□□ 2.23
BBC3-201ENST00000300880 ZMYM3Q14202 1370 aa28.95■■■□□ 2.23
BBC3-201ENST00000300880 MYO3AQ8NEV4 1616 aa28.95■■■□□ 2.22
BBC3-201ENST00000300880 SAMD9LQ8IVG5 1584 aa28.95■■■□□ 2.22
BBC3-201ENST00000300880 UBTFP17480 764 aaKnown RBP28.94■■■□□ 2.22
BBC3-201ENST00000300880 TCOF1Q13428 1488 aaKnown RBP28.89■■■□□ 2.22
BBC3-201ENST00000300880 CEP170BQ9Y4F5 1589 aaPredicted RBP28.88■■■□□ 2.21
BBC3-201ENST00000300880 PLA2R1Q13018 1463 aa28.87■■■□□ 2.21
BBC3-201ENST00000300880 MED1Q15648 1581 aaPredicted RBP28.85■■■□□ 2.21
BBC3-201ENST00000300880 PTPRKQ15262 1439 aa28.84■■■□□ 2.21
BBC3-201ENST00000300880 SYCP2Q9BX26 1530 aa28.83■■■□□ 2.21
BBC3-201ENST00000300880 PLXNC1O60486 1568 aa28.82■■■□□ 2.2
BBC3-201ENST00000300880 PKD2Q13563 968 aa28.82■■■□□ 2.2
BBC3-201ENST00000300880 HSPA1LP34931 641 aa28.8■■■□□ 2.2
BBC3-201ENST00000300880 ZNF777Q9ULD5 760 aaPredicted RBP28.79■■■□□ 2.2
BBC3-201ENST00000300880 HNRNPMP52272 730 aaKnown RBP eCLIP28.78■■■□□ 2.28e-7■□□□□ 11.2
BBC3-201ENST00000300880 SPAG9O60271 1321 aaKnown RBP28.78■■■□□ 2.2
BBC3-201ENST00000300880 ATP7AQ04656 1500 aa28.78■■■□□ 2.2
BBC3-201ENST00000300880 INO80Q9ULG1 1556 aaPredicted RBP28.78■■■□□ 2.2
BBC3-201ENST00000300880 CASKIN1Q8WXD9 1431 aa28.77■■■□□ 2.2
BBC3-201ENST00000300880 CCDC18Q5T9S5 1454 aa28.76■■■□□ 2.2
BBC3-201ENST00000300880 PPP6R1Q9UPN7 881 aa28.75■■■□□ 2.19
BBC3-201ENST00000300880 GPATCH8Q9UKJ3 1502 aaKnown RBP28.75■■■□□ 2.19
BBC3-201ENST00000300880 DNMT1P26358 1616 aaKnown RBP28.74■■■□□ 2.19
BBC3-201ENST00000300880 A2MP01023 1474 aa28.74■■■□□ 2.19
BBC3-201ENST00000300880 LOC105371045A0A1W2PR82 267 aa28.72■■■□□ 2.19
BBC3-201ENST00000300880 PIP4K2BP78356 416 aa28.71■■■□□ 2.19
BBC3-201ENST00000300880 POLR1AO95602 1720 aaPredicted RBP28.71■■■□□ 2.19
BBC3-201ENST00000300880 NEURL4Q96JN8 1562 aa28.71■■■□□ 2.19
BBC3-201ENST00000300880 GGT6Q6P531 493 aa28.7■■■□□ 2.19
BBC3-201ENST00000300880 SCAF1Q9H7N4 1312 aaKnown RBP28.7■■■□□ 2.18
BBC3-201ENST00000300880 A2ML1A8K2U0 1454 aa28.68■■■□□ 2.18
BBC3-201ENST00000300880 ALKQ9UM73 1620 aa28.66■■■□□ 2.18
BBC3-201ENST00000300880 ADGBQ8N7X0 1667 aa28.65■■■□□ 2.18
BBC3-201ENST00000300880 KIAA1107Q9UPP5 1409 aa28.63■■■□□ 2.17
BBC3-201ENST00000300880 CPS1P31327 1500 aa28.62■■■□□ 2.17
BBC3-201ENST00000300880 SHANK2Q9UPX8 1470 aa28.62■■■□□ 2.17
BBC3-201ENST00000300880 TOM1O60784 492 aa28.59■■■□□ 2.17
BBC3-201ENST00000300880 FYCO1Q9BQS8 1478 aa28.59■■■□□ 2.17
BBC3-201ENST00000300880 VWDEQ8N2E2 1590 aa28.59■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms