RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 DISP1Q96F81 1524 aa14.18□□□□□ -0.14
FOXN4-201ENST00000299162 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.17□□□□□ -0.14
FOXN4-201ENST00000299162 WDR62O43379 1518 aa14.17□□□□□ -0.14
FOXN4-201ENST00000299162 NUP153P49790 1475 aaKnown RBP14.16□□□□□ -0.14
FOXN4-201ENST00000299162 ANO8Q9HCE9 1232 aaPredicted RBP14.16□□□□□ -0.14
FOXN4-201ENST00000299162 HSPA5P11021 654 aaKnown RBP14.14□□□□□ -0.15
FOXN4-201ENST00000299162 HNRNPMP52272 730 aaKnown RBP eCLIP14.14□□□□□ -0.15
FOXN4-201ENST00000299162 SENP3-EIF4A1A0A087X0R7 540 aa14.14□□□□□ -0.15
FOXN4-201ENST00000299162 KDM6BO15054 1643 aa14.13□□□□□ -0.15
FOXN4-201ENST00000299162 TIMELESSQ9UNS1 1208 aa14.12□□□□□ -0.15
FOXN4-201ENST00000299162 CARMIL2Q6F5E8 1435 aa14.12□□□□□ -0.15
FOXN4-201ENST00000299162 KDM2AQ9Y2K7 1162 aa14.11□□□□□ -0.15
FOXN4-201ENST00000299162 KIAA0556O60303 1618 aa14.11□□□□□ -0.15
FOXN4-201ENST00000299162 FKBP8Q14318 412 aa14.11□□□□□ -0.15
FOXN4-201ENST00000299162 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.11□□□□□ -0.15
FOXN4-201ENST00000299162 SYNJ2O15056 1496 aa14.1□□□□□ -0.15
FOXN4-201ENST00000299162 CEP170Q5SW79 1584 aa14.09□□□□□ -0.15
FOXN4-201ENST00000299162 ABCC5O15440 1437 aa14.09□□□□□ -0.15
FOXN4-201ENST00000299162 DAPK1P53355 1430 aa14.09□□□□□ -0.15
FOXN4-201ENST00000299162 PKD2Q13563 968 aa14.09□□□□□ -0.15
FOXN4-201ENST00000299162 EIF4G2P78344 907 aaKnown RBP eCLIP14.08□□□□□ -0.15
FOXN4-201ENST00000299162 TSPY4P0CV99 314 aa14.07□□□□□ -0.16
FOXN4-201ENST00000299162 TSPY10P0CW01 314 aa14.07□□□□□ -0.16
FOXN4-201ENST00000299162 NBPF8Q3BBV2 869 aa14.07□□□□□ -0.16
FOXN4-201ENST00000299162 MAGI1Q96QZ7 1491 aaPredicted RBP14.06□□□□□ -0.16
FOXN4-201ENST00000299162 MIA2Q96PC5 1412 aa14.06□□□□□ -0.16
FOXN4-201ENST00000299162 RAPGEF6Q8TEU7 1601 aa14.05□□□□□ -0.16
FOXN4-201ENST00000299162 TROQ12816 1431 aaPredicted RBP14.05□□□□□ -0.16
FOXN4-201ENST00000299162 ARHGEF11O15085 1522 aa14.04□□□□□ -0.16
FOXN4-201ENST00000299162 C11orf95C9JLR9 678 aaPredicted RBP14.04□□□□□ -0.16
FOXN4-201ENST00000299162 PTPRGP23470 1445 aa14.04□□□□□ -0.16
FOXN4-201ENST00000299162 WASHC2AQ641Q2 1341 aa14.04□□□□□ -0.16
FOXN4-201ENST00000299162 MYT1LQ9UL68 1186 aa14.03□□□□□ -0.16
FOXN4-201ENST00000299162 HNRNPUQ00839 825 aaKnown RBP eCLIP14.03□□□□□ -0.16
FOXN4-201ENST00000299162 RGL3Q3MIN7 710 aa14.03□□□□□ -0.16
FOXN4-201ENST00000299162 FAM9BQ8IZU0 186 aa14.02□□□□□ -0.17
FOXN4-201ENST00000299162 DENND4BO75064 1496 aaPredicted RBP14.02□□□□□ -0.17
FOXN4-201ENST00000299162 TCOF1Q13428 1488 aaKnown RBP14.02□□□□□ -0.17
FOXN4-201ENST00000299162 KIF14Q15058 1648 aa14.01□□□□□ -0.17
FOXN4-201ENST00000299162 NUP155O75694 1391 aa14.01□□□□□ -0.17
FOXN4-201ENST00000299162 CAMSAP2Q08AD1 1489 aa14.01□□□□□ -0.17
FOXN4-201ENST00000299162 IRX6P78412 446 aaPredicted RBP14□□□□□ -0.17
FOXN4-201ENST00000299162 GPATCH8Q9UKJ3 1502 aaKnown RBP14□□□□□ -0.17
FOXN4-201ENST00000299162 NEFLP07196 543 aa14□□□□□ -0.17
FOXN4-201ENST00000299162 CCDC184Q52MB2 194 aa13.99□□□□□ -0.17
FOXN4-201ENST00000299162 ATP10BO94823 1461 aa13.98□□□□□ -0.17
FOXN4-201ENST00000299162 ANKRD30AQ9BXX3 1397 aa13.97□□□□□ -0.17
FOXN4-201ENST00000299162 NUP160Q12769 1436 aa13.97□□□□□ -0.17
FOXN4-201ENST00000299162 ANKRD30BQ9BXX2 1392 aa13.96□□□□□ -0.17
FOXN4-201ENST00000299162 NCOA1Q15788 1441 aa13.96□□□□□ -0.18
FOXN4-201ENST00000299162 DCAF11Q8TEB1 546 aa13.96□□□□□ -0.18
FOXN4-201ENST00000299162 SLC24A1O60721 1099 aa13.95□□□□□ -0.18
FOXN4-201ENST00000299162 AKNAQ7Z591 1439 aa13.95□□□□□ -0.18
FOXN4-201ENST00000299162 RBM19Q9Y4C8 960 aaKnown RBP13.94□□□□□ -0.18
FOXN4-201ENST00000299162 ANKRD50Q9ULJ7 1429 aa13.94□□□□□ -0.18
FOXN4-201ENST00000299162 MRS2Q9HD23 443 aa13.93□□□□□ -0.18
FOXN4-201ENST00000299162 ROCK1Q13464 1354 aa13.92□□□□□ -0.18
FOXN4-201ENST00000299162 KIF15Q9NS87 1388 aa13.91□□□□□ -0.18
FOXN4-201ENST00000299162 CARD11Q9BXL7 1154 aa13.91□□□□□ -0.18
FOXN4-201ENST00000299162 C9orf84Q5VXU9 1444 aa13.91□□□□□ -0.18
FOXN4-201ENST00000299162 CCER2I3L3R5 266 aa13.9□□□□□ -0.18
FOXN4-201ENST00000299162 DNMT1P26358 1616 aaKnown RBP13.9□□□□□ -0.18
FOXN4-201ENST00000299162 CCDC136Q96JN2 1154 aa13.9□□□□□ -0.18
FOXN4-201ENST00000299162 KDM5BQ9UGL1 1544 aa13.89□□□□□ -0.19
FOXN4-201ENST00000299162 GCC2Q8IWJ2 1684 aa13.89□□□□□ -0.19
FOXN4-201ENST00000299162 KIF7Q2M1P5 1343 aa13.89□□□□□ -0.19
FOXN4-201ENST00000299162 SALL2Q9Y467 1007 aaPredicted RBP13.88□□□□□ -0.19
FOXN4-201ENST00000299162 PZPP20742 1482 aa13.87□□□□□ -0.19
FOXN4-201ENST00000299162 ERCC6L2Q5T890 1561 aa13.87□□□□□ -0.19
FOXN4-201ENST00000299162 RPRD2Q5VT52 1461 aaKnown RBP13.87□□□□□ -0.19
FOXN4-201ENST00000299162 CCDC7Q96M83 1385 aa13.86□□□□□ -0.19
FOXN4-201ENST00000299162 SENP3Q9H4L4 574 aaPredicted RBP13.85□□□□□ -0.19
FOXN4-201ENST00000299162 ST20-MTHFSA0A0A6YYL1 179 aa13.84□□□□□ -0.19
FOXN4-201ENST00000299162 PRKRIP1Q9H875 184 aaPredicted RBP13.84□□□□□ -0.19
FOXN4-201ENST00000299162 KIAA1107Q9UPP5 1409 aa13.84□□□□□ -0.19
FOXN4-201ENST00000299162 AFAP1Q8N556 730 aa13.84□□□□□ -0.19
FOXN4-201ENST00000299162 USP47Q96K76 1375 aa13.83□□□□□ -0.19
FOXN4-201ENST00000299162 ARHGAP5Q13017 1502 aa13.82□□□□□ -0.2
FOXN4-201ENST00000299162 ABCA8O94911 1581 aa13.81□□□□□ -0.2
FOXN4-201ENST00000299162 NBPF1Q3BBV0 1214 aa13.8□□□□□ -0.2
FOXN4-201ENST00000299162 TEX14Q8IWB6 1497 aa13.8□□□□□ -0.2
FOXN4-201ENST00000299162 ABCC10Q5T3U5 1492 aa13.8□□□□□ -0.2
FOXN4-201ENST00000299162 CHD1O14646 1710 aa13.8□□□□□ -0.2
FOXN4-201ENST00000299162 CNTLNQ9NXG0 1405 aa13.79□□□□□ -0.2
FOXN4-201ENST00000299162 ITSN2Q9NZM3 1697 aa13.79□□□□□ -0.2
FOXN4-201ENST00000299162 MSH5O43196 834 aa13.78□□□□□ -0.2
FOXN4-201ENST00000299162 UBE2Q2Q8WVN8 375 aa13.77□□□□□ -0.2
FOXN4-201ENST00000299162 CDC42BPAQ5VT25 1732 aa13.77□□□□□ -0.2
FOXN4-201ENST00000299162 NBR1Q14596 966 aa13.77□□□□□ -0.21
FOXN4-201ENST00000299162 EFCAB2Q5VUJ9 269 aa13.77□□□□□ -0.21
FOXN4-201ENST00000299162 SYCP2Q9BX26 1530 aa13.76□□□□□ -0.21
FOXN4-201ENST00000299162 ROCK2O75116 1388 aaKnown RBP13.76□□□□□ -0.21
FOXN4-201ENST00000299162 PLEKHH2Q8IVE3 1493 aa13.74□□□□□ -0.21
FOXN4-201ENST00000299162 TMC1Q8TDI8 760 aa13.74□□□□□ -0.21
FOXN4-201ENST00000299162 CCDC141Q6ZP82 1450 aa13.74□□□□□ -0.21
FOXN4-201ENST00000299162 MBD5Q9P267 1494 aa13.73□□□□□ -0.21
FOXN4-201ENST00000299162 CCDC144AA2RUR9 1427 aa13.73□□□□□ -0.21
FOXN4-201ENST00000299162 CHGAP10645 457 aaKnown RBP13.73□□□□□ -0.21
FOXN4-201ENST00000299162 EIF5BO60841 1220 aaKnown RBP13.72□□□□□ -0.21
FOXN4-201ENST00000299162 SPAG9O60271 1321 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms