RNA–Protein interactions for RNA: ENST00000297350.8

TNFRSF11B-201, Transcript of TNF receptor superfamily member 11b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF11B, Length 2,402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-201ENST00000297350 PLB1Q6P1J6 1458 aa14.13□□□□□ -0.15
TNFRSF11B-201ENST00000297350 FBLN2P98095 1184 aa14.13□□□□□ -0.15
TNFRSF11B-201ENST00000297350 MYT1Q01538 1121 aa14.13□□□□□ -0.15
TNFRSF11B-201ENST00000297350 DENND4BO75064 1496 aaPredicted RBP14.13□□□□□ -0.15
TNFRSF11B-201ENST00000297350 CROCC2H7BZ55 1655 aa14.12□□□□□ -0.15
TNFRSF11B-201ENST00000297350 DDX10Q13206 875 aaKnown RBP14.12□□□□□ -0.15
TNFRSF11B-201ENST00000297350 ANP32CO43423 234 aa14.12□□□□□ -0.15
TNFRSF11B-201ENST00000297350 ABCC5O15440 1437 aa14.11□□□□□ -0.15
TNFRSF11B-201ENST00000297350 KDM6BO15054 1643 aa14.11□□□□□ -0.15
TNFRSF11B-201ENST00000297350 PRG4Q92954 1404 aaPredicted RBP14.11□□□□□ -0.15
TNFRSF11B-201ENST00000297350 ADGRL2O95490 1459 aa14.1□□□□□ -0.15
TNFRSF11B-201ENST00000297350 RRP7BPQ9NSQ0 103 aa14.09□□□□□ -0.15
TNFRSF11B-201ENST00000297350 RPRD2Q5VT52 1461 aaKnown RBP14.08□□□□□ -0.15
TNFRSF11B-201ENST00000297350 CAMSAP2Q08AD1 1489 aa14.08□□□□□ -0.16
TNFRSF11B-201ENST00000297350 MPHOSPH9Q99550 1183 aa14.07□□□□□ -0.16
TNFRSF11B-201ENST00000297350 SUPT16HQ9Y5B9 1047 aaKnown RBP14.06□□□□□ -0.16
TNFRSF11B-201ENST00000297350 KIF14Q15058 1648 aa14.06□□□□□ -0.16
TNFRSF11B-201ENST00000297350 SHANK2Q9UPX8 1470 aa14.06□□□□□ -0.16
TNFRSF11B-201ENST00000297350 TRIM52Q96A61 297 aa14.06□□□□□ -0.16
TNFRSF11B-201ENST00000297350 POLR1AO95602 1720 aaPredicted RBP14.06□□□□□ -0.16
TNFRSF11B-201ENST00000297350 ANKRD30BQ9BXX2 1392 aa14.06□□□□□ -0.16
TNFRSF11B-201ENST00000297350 GPATCH8Q9UKJ3 1502 aaKnown RBP14.04□□□□□ -0.16
TNFRSF11B-201ENST00000297350 CHIC2Q9UKJ5 165 aa14.04□□□□□ -0.16
TNFRSF11B-201ENST00000297350 ATP10BO94823 1461 aa14.03□□□□□ -0.16
TNFRSF11B-201ENST00000297350 TEX14Q8IWB6 1497 aa14.03□□□□□ -0.16
TNFRSF11B-201ENST00000297350 PTPRGP23470 1445 aa14.03□□□□□ -0.16
TNFRSF11B-201ENST00000297350 ABCC2Q92887 1545 aa14.03□□□□□ -0.16
TNFRSF11B-201ENST00000297350 CDC42BPAQ5VT25 1732 aa14.02□□□□□ -0.17
TNFRSF11B-201ENST00000297350 EIF4G2P78344 907 aaKnown RBP eCLIP14.02□□□□□ -0.17
TNFRSF11B-201ENST00000297350 NCOA1Q15788 1441 aa14.01□□□□□ -0.17
TNFRSF11B-201ENST00000297350 ABCC10Q5T3U5 1492 aa14.01□□□□□ -0.17
TNFRSF11B-201ENST00000297350 ERCC6L2Q5T890 1561 aa14.01□□□□□ -0.17
TNFRSF11B-201ENST00000297350 UHRF1BP1LA0JNW5 1464 aa14□□□□□ -0.17
TNFRSF11B-201ENST00000297350 ANKRD30AQ9BXX3 1397 aa14□□□□□ -0.17
TNFRSF11B-201ENST00000297350 PZPP20742 1482 aa13.99□□□□□ -0.17
TNFRSF11B-201ENST00000297350 CFDP1Q9UEE9 299 aaPredicted RBP13.99□□□□□ -0.17
TNFRSF11B-201ENST00000297350 ARHGEF5Q12774 1597 aa13.99□□□□□ -0.17
TNFRSF11B-201ENST00000297350 KDM5DQ9BY66 1539 aa13.98□□□□□ -0.17
TNFRSF11B-201ENST00000297350 CNTLNQ9NXG0 1405 aa13.98□□□□□ -0.17
TNFRSF11B-201ENST00000297350 KIAA1107Q9UPP5 1409 aa13.97□□□□□ -0.17
TNFRSF11B-201ENST00000297350 HSPA5P11021 654 aaKnown RBP13.96□□□□□ -0.17
TNFRSF11B-201ENST00000297350 KCNH8Q96L42 1107 aa13.96□□□□□ -0.17
TNFRSF11B-201ENST00000297350 PREX2Q70Z35 1606 aa13.96□□□□□ -0.17
TNFRSF11B-201ENST00000297350 L3MBTL2Q969R5 705 aa13.96□□□□□ -0.17
TNFRSF11B-201ENST00000297350 MBD5Q9P267 1494 aa13.96□□□□□ -0.18
TNFRSF11B-201ENST00000297350 SLC4A1APQ9BWU0 796 aaKnown RBP13.94□□□□□ -0.18
TNFRSF11B-201ENST00000297350 WASHC2AQ641Q2 1341 aa13.94□□□□□ -0.18
TNFRSF11B-201ENST00000297350 ZCCHC11Q5TAX3 1644 aaKnown RBP13.94□□□□□ -0.18
TNFRSF11B-201ENST00000297350 ARHGEF12Q9NZN5 1544 aa13.93□□□□□ -0.18
TNFRSF11B-201ENST00000297350 ZNF644Q9H582 1327 aaPredicted RBP13.93□□□□□ -0.18
TNFRSF11B-201ENST00000297350 HIRIP3Q9BW71 556 aaPredicted RBP13.93□□□□□ -0.18
TNFRSF11B-201ENST00000297350 SPATA31E1Q6ZUB1 1445 aa13.93□□□□□ -0.18
TNFRSF11B-201ENST00000297350 PLEKHD1A6NEE1 506 aa13.93□□□□□ -0.18
TNFRSF11B-201ENST00000297350 NEFLP07196 543 aa13.93□□□□□ -0.18
TNFRSF11B-201ENST00000297350 CCDC7Q96M83 1385 aa13.92□□□□□ -0.18
TNFRSF11B-201ENST00000297350 ARID3CA6NKF2 412 aa13.92□□□□□ -0.18
TNFRSF11B-201ENST00000297350 ANKRD50Q9ULJ7 1429 aa13.92□□□□□ -0.18
TNFRSF11B-201ENST00000297350 C9orf84Q5VXU9 1444 aa13.91□□□□□ -0.18
TNFRSF11B-201ENST00000297350 CDC42BPBQ9Y5S2 1711 aa13.9□□□□□ -0.18
TNFRSF11B-201ENST00000297350 ARID4BQ4LE39 1312 aaPredicted RBP13.9□□□□□ -0.18
TNFRSF11B-201ENST00000297350 MYO5CQ9NQX4 1742 aa13.9□□□□□ -0.18
TNFRSF11B-201ENST00000297350 UHRF1BP1Q6BDS2 1440 aa13.89□□□□□ -0.19
TNFRSF11B-201ENST00000297350 RSPH4AQ5TD94 716 aa13.88□□□□□ -0.19
TNFRSF11B-201ENST00000297350 TTC37Q6PGP7 1564 aa13.88□□□□□ -0.19
TNFRSF11B-201ENST00000297350 MAST1Q9Y2H9 1570 aa13.88□□□□□ -0.19
TNFRSF11B-201ENST00000297350 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.87□□□□□ -0.19
TNFRSF11B-201ENST00000297350 SAMD9LQ8IVG5 1584 aa13.86□□□□□ -0.19
TNFRSF11B-201ENST00000297350 CCDC141Q6ZP82 1450 aa13.86□□□□□ -0.19
TNFRSF11B-201ENST00000297350 RALGAPBQ86X10 1494 aa13.85□□□□□ -0.19
TNFRSF11B-201ENST00000297350 PLEKHH2Q8IVE3 1493 aa13.84□□□□□ -0.19
TNFRSF11B-201ENST00000297350 ARAP3Q8WWN8 1544 aa13.84□□□□□ -0.19
TNFRSF11B-201ENST00000297350 NBPF8Q3BBV2 869 aa13.84□□□□□ -0.19
TNFRSF11B-201ENST00000297350 KDM5CP41229 1560 aa13.84□□□□□ -0.19
TNFRSF11B-201ENST00000297350 FOXD1Q16676 465 aa13.83□□□□□ -0.19
TNFRSF11B-201ENST00000297350 ROCK2O75116 1388 aaKnown RBP13.83□□□□□ -0.2
TNFRSF11B-201ENST00000297350 TSPY4P0CV99 314 aa13.83□□□□□ -0.2
TNFRSF11B-201ENST00000297350 TSPY10P0CW01 314 aa13.83□□□□□ -0.2
TNFRSF11B-201ENST00000297350 ERICH6BQ5W0A0 696 aa13.83□□□□□ -0.2
TNFRSF11B-201ENST00000297350 PLXNC1O60486 1568 aa13.82□□□□□ -0.2
TNFRSF11B-201ENST00000297350 FKBP8Q14318 412 aa13.82□□□□□ -0.2
TNFRSF11B-201ENST00000297350 UNC13BO14795 1591 aa13.82□□□□□ -0.2
TNFRSF11B-201ENST00000297350 PRKRIP1Q9H875 184 aaPredicted RBP13.81□□□□□ -0.2
TNFRSF11B-201ENST00000297350 ZNF777Q9ULD5 760 aaPredicted RBP13.81□□□□□ -0.2
TNFRSF11B-201ENST00000297350 KIF15Q9NS87 1388 aa13.81□□□□□ -0.2
TNFRSF11B-201ENST00000297350 PKD2Q13563 968 aa13.81□□□□□ -0.2
TNFRSF11B-201ENST00000297350 KIF7Q2M1P5 1343 aa13.8□□□□□ -0.2
TNFRSF11B-201ENST00000297350 NUP155O75694 1391 aa13.8□□□□□ -0.2
TNFRSF11B-201ENST00000297350 USP47Q96K76 1375 aa13.79□□□□□ -0.2
TNFRSF11B-201ENST00000297350 ARHGAP5Q13017 1502 aa13.78□□□□□ -0.2
TNFRSF11B-201ENST00000297350 HNRNPUQ00839 825 aaKnown RBP eCLIP13.78□□□□□ -0.2
TNFRSF11B-201ENST00000297350 FAM135AQ9P2D6 1515 aa13.77□□□□□ -0.21
TNFRSF11B-201ENST00000297350 ABCA9Q8IUA7 1624 aa13.77□□□□□ -0.21
TNFRSF11B-201ENST00000297350 TSHZ2Q9NRE2 1034 aa13.76□□□□□ -0.21
TNFRSF11B-201ENST00000297350 KTN1Q86UP2 1357 aaKnown RBP13.76□□□□□ -0.21
TNFRSF11B-201ENST00000297350 LAMC1P11047 1609 aa13.76□□□□□ -0.21
TNFRSF11B-201ENST00000297350 WDR7Q9Y4E6 1490 aa13.76□□□□□ -0.21
TNFRSF11B-201ENST00000297350 ABCC1P33527 1531 aa13.76□□□□□ -0.21
TNFRSF11B-201ENST00000297350 SYCP2Q9BX26 1530 aa13.76□□□□□ -0.21
TNFRSF11B-201ENST00000297350 C11orf95C9JLR9 678 aaPredicted RBP13.75□□□□□ -0.21
TNFRSF11B-201ENST00000297350 BCORL1Q5H9F3 1711 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms