RNA–Protein interactions for RNA: ENST00000296325.9

LRPAP1-201, Transcript of LDL receptor related protein associated protein 1, humanhuman

TSL 1 (best)

Gene LRPAP1, Length 1,078 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPAP1-201ENST00000296325 MLECQ14165 292 aa30.27■■■□□ 2.44
LRPAP1-201ENST00000296325 PREX1Q8TCU6 1659 aa30.26■■■□□ 2.43
LRPAP1-201ENST00000296325 CSRNP3Q8WYN3 585 aa30.23■■■□□ 2.43
LRPAP1-201ENST00000296325 SCAPERQ9BY12 1400 aa30.22■■■□□ 2.43
LRPAP1-201ENST00000296325 STRCQ7RTU9 1775 aa30.21■■■□□ 2.43
LRPAP1-201ENST00000296325 ATP10AO60312 1499 aa30.21■■■□□ 2.43
LRPAP1-201ENST00000296325 PLCH2O75038 1416 aa30.2■■■□□ 2.42
LRPAP1-201ENST00000296325 C9orf84Q5VXU9 1444 aa30.19■■■□□ 2.42
LRPAP1-201ENST00000296325 DMRT2Q9Y5R5 561 aa30.16■■■□□ 2.42
LRPAP1-201ENST00000296325 CEBPAP49715 358 aaPredicted RBP30.14■■■□□ 2.42
LRPAP1-201ENST00000296325 CDK13Q14004 1512 aaKnown RBP30.12■■■□□ 2.41
LRPAP1-201ENST00000296325 SPATA31D1Q6ZQQ2 1576 aa30.1■■■□□ 2.41
LRPAP1-201ENST00000296325 UHRF1BP1Q6BDS2 1440 aa30.09■■■□□ 2.41
LRPAP1-201ENST00000296325 RANGAP1P46060 587 aaPredicted RBP30.08■■■□□ 2.41
LRPAP1-201ENST00000296325 SETD1BQ9UPS6 1966 aaKnown RBP30.08■■■□□ 2.41
LRPAP1-201ENST00000296325 PTPRTO14522 1441 aa30.06■■■□□ 2.4
LRPAP1-201ENST00000296325 KDM5CP41229 1560 aa30.03■■■□□ 2.4
LRPAP1-201ENST00000296325 ZNF518AQ6AHZ1 1483 aa30.01■■■□□ 2.4
LRPAP1-201ENST00000296325 LTBP4Q8N2S1 1624 aa30.01■■■□□ 2.39
LRPAP1-201ENST00000296325 EFCAB2Q5VUJ9 269 aa30.01■■■□□ 2.39
LRPAP1-201ENST00000296325 EEA1Q15075 1411 aa29.99■■■□□ 2.39
LRPAP1-201ENST00000296325 MYO5CQ9NQX4 1742 aa29.99■■■□□ 2.39
LRPAP1-201ENST00000296325 REREQ9P2R6 1566 aa29.98■■■□□ 2.39
LRPAP1-201ENST00000296325 IQSEC2Q5JU85 1478 aa29.97■■■□□ 2.39
LRPAP1-201ENST00000296325 DIP2CQ9Y2E4 1556 aa29.96■■■□□ 2.39
LRPAP1-201ENST00000296325 C3P01024 1663 aa29.93■■■□□ 2.38
LRPAP1-201ENST00000296325 AFAP1Q8N556 730 aa29.93■■■□□ 2.38
LRPAP1-201ENST00000296325 KIF14Q15058 1648 aa29.9■■■□□ 2.38
LRPAP1-201ENST00000296325 NCOA1Q15788 1441 aa29.88■■■□□ 2.37
LRPAP1-201ENST00000296325 AGLP35573 1532 aa29.88■■■□□ 2.37
LRPAP1-201ENST00000296325 TRAPPC8Q9Y2L5 1435 aa29.88■■■□□ 2.37
LRPAP1-201ENST00000296325 MLH3Q9UHC1 1453 aa29.87■■■□□ 2.37
LRPAP1-201ENST00000296325 ABCA6Q8N139 1617 aa29.87■■■□□ 2.37
LRPAP1-201ENST00000296325 ARHGAP5Q13017 1502 aa29.85■■■□□ 2.37
LRPAP1-201ENST00000296325 TROQ12816 1431 aaPredicted RBP29.83■■■□□ 2.37
LRPAP1-201ENST00000296325 FMN1Q68DA7 1419 aa29.82■■■□□ 2.36
LRPAP1-201ENST00000296325 CDK11AQ9UQ88 783 aaPredicted RBP29.8■■■□□ 2.36
LRPAP1-201ENST00000296325 CNTLNQ9NXG0 1405 aa29.76■■■□□ 2.35
LRPAP1-201ENST00000296325 CDC42BPBQ9Y5S2 1711 aa29.74■■■□□ 2.35
LRPAP1-201ENST00000296325 ABCC1P33527 1531 aa29.73■■■□□ 2.35
LRPAP1-201ENST00000296325 ARHGAP35Q9NRY4 1499 aa29.73■■■□□ 2.35
LRPAP1-201ENST00000296325 NPATQ14207 1427 aa29.72■■■□□ 2.35
LRPAP1-201ENST00000296325 CLIP1P30622 1438 aa29.71■■■□□ 2.35
LRPAP1-201ENST00000296325 CAMSAP1Q5T5Y3 1602 aa29.71■■■□□ 2.35
LRPAP1-201ENST00000296325 ESF1Q9H501 851 aaKnown RBP29.71■■■□□ 2.35
LRPAP1-201ENST00000296325 MYT1LQ9UL68 1186 aa29.71■■■□□ 2.35
LRPAP1-201ENST00000296325 ATP1B4Q9UN42 357 aaPredicted RBP29.7■■■□□ 2.35
LRPAP1-201ENST00000296325 KIDINS220Q9ULH0 1771 aa29.69■■■□□ 2.34
LRPAP1-201ENST00000296325 PREX2Q70Z35 1606 aa29.67■■■□□ 2.34
LRPAP1-201ENST00000296325 MROH2AA6NES4 1674 aa29.66■■■□□ 2.34
LRPAP1-201ENST00000296325 ITSN2Q9NZM3 1697 aa29.66■■■□□ 2.34
LRPAP1-201ENST00000296325 LRRIQ1Q96JM4 1722 aa29.65■■■□□ 2.34
LRPAP1-201ENST00000296325 ZNF335Q9H4Z2 1342 aaPredicted RBP29.65■■■□□ 2.34
LRPAP1-201ENST00000296325 PLA2R1Q13018 1463 aa29.61■■■□□ 2.33
LRPAP1-201ENST00000296325 UBAP1LF5GYI3 381 aa29.6■■■□□ 2.33
LRPAP1-201ENST00000296325 ZMYM3Q14202 1370 aa29.6■■■□□ 2.33
LRPAP1-201ENST00000296325 NCKAP5LQ9HCH0 1330 aa29.59■■■□□ 2.33
LRPAP1-201ENST00000296325 TCOF1Q13428 1488 aaKnown RBP29.58■■■□□ 2.33
LRPAP1-201ENST00000296325 ZNF142P52746 1687 aaPredicted RBP29.56■■■□□ 2.32
LRPAP1-201ENST00000296325 SAMD9LQ8IVG5 1584 aa29.55■■■□□ 2.32
LRPAP1-201ENST00000296325 PKD2Q13563 968 aa29.54■■■□□ 2.32
LRPAP1-201ENST00000296325 MYO3AQ8NEV4 1616 aa29.53■■■□□ 2.32
LRPAP1-201ENST00000296325 UBTFP17480 764 aaKnown RBP29.5■■■□□ 2.31
LRPAP1-201ENST00000296325 CEP170BQ9Y4F5 1589 aaPredicted RBP29.5■■■□□ 2.31
LRPAP1-201ENST00000296325 CDC42BPAQ5VT25 1732 aa29.5■■■□□ 2.31
LRPAP1-201ENST00000296325 PTPRKQ15262 1439 aa29.49■■■□□ 2.31
LRPAP1-201ENST00000296325 PLXNC1O60486 1568 aa29.47■■■□□ 2.31
LRPAP1-201ENST00000296325 CCDC18Q5T9S5 1454 aa29.46■■■□□ 2.31
LRPAP1-201ENST00000296325 CLTCQ00610 1675 aaKnown RBP29.44■■■□□ 2.3
LRPAP1-201ENST00000296325 CASKIN1Q8WXD9 1431 aa29.44■■■□□ 2.3
LRPAP1-201ENST00000296325 MED1Q15648 1581 aaPredicted RBP29.43■■■□□ 2.3
LRPAP1-201ENST00000296325 SYCP2Q9BX26 1530 aa29.43■■■□□ 2.3
LRPAP1-201ENST00000296325 SUPT6HQ7KZ85 1726 aaKnown RBP29.42■■■□□ 2.3
LRPAP1-201ENST00000296325 SPAG9O60271 1321 aaKnown RBP29.41■■■□□ 2.3
LRPAP1-201ENST00000296325 PPP6R1Q9UPN7 881 aa29.4■■■□□ 2.3
LRPAP1-201ENST00000296325 ATP7AQ04656 1500 aa29.4■■■□□ 2.3
LRPAP1-201ENST00000296325 EHMT2Q96KQ7 1210 aa29.39■■■□□ 2.3
LRPAP1-201ENST00000296325 INO80Q9ULG1 1556 aaPredicted RBP29.39■■■□□ 2.29
LRPAP1-201ENST00000296325 HSPA1LP34931 641 aa29.38■■■□□ 2.29
LRPAP1-201ENST00000296325 A2MP01023 1474 aa29.37■■■□□ 2.29
LRPAP1-201ENST00000296325 GPATCH8Q9UKJ3 1502 aaKnown RBP29.37■■■□□ 2.29
LRPAP1-201ENST00000296325 KIAA1107Q9UPP5 1409 aa29.36■■■□□ 2.29
LRPAP1-201ENST00000296325 A2ML1A8K2U0 1454 aa29.34■■■□□ 2.29
LRPAP1-201ENST00000296325 HNRNPMP52272 730 aaKnown RBP eCLIP29.33■■■□□ 2.291e-6■■■■□ 26.5
LRPAP1-201ENST00000296325 DNMT1P26358 1616 aaKnown RBP29.32■■■□□ 2.28
LRPAP1-201ENST00000296325 ZNF777Q9ULD5 760 aaPredicted RBP29.32■■■□□ 2.28
LRPAP1-201ENST00000296325 CPS1P31327 1500 aa29.31■■■□□ 2.28
LRPAP1-201ENST00000296325 NEURL4Q96JN8 1562 aa29.29■■■□□ 2.28
LRPAP1-201ENST00000296325 GGT6Q6P531 493 aa29.28■■■□□ 2.28
LRPAP1-201ENST00000296325 PLEKHH2Q8IVE3 1493 aa29.28■■■□□ 2.28
LRPAP1-201ENST00000296325 TOM1O60784 492 aa29.27■■■□□ 2.28
LRPAP1-201ENST00000296325 FYCO1Q9BQS8 1478 aa29.26■■■□□ 2.27
LRPAP1-201ENST00000296325 SHANK2Q9UPX8 1470 aa29.26■■■□□ 2.27
LRPAP1-201ENST00000296325 PIP4K2BP78356 416 aa29.25■■■□□ 2.27
LRPAP1-201ENST00000296325 SCAF1Q9H7N4 1312 aaKnown RBP29.23■■■□□ 2.27
LRPAP1-201ENST00000296325 ALKQ9UM73 1620 aa29.23■■■□□ 2.27
LRPAP1-201ENST00000296325 POLR1AO95602 1720 aaPredicted RBP29.23■■■□□ 2.27
LRPAP1-201ENST00000296325 ADGBQ8N7X0 1667 aa29.21■■■□□ 2.27
LRPAP1-201ENST00000296325 VWDEQ8N2E2 1590 aa29.18■■■□□ 2.26
LRPAP1-201ENST00000296325 CFDP1Q9UEE9 299 aaPredicted RBP29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms