RNA–Protein interactions for RNA: ENST00000296292.7

RFT1-201, Transcript of RFT1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFT1, Length 5,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1-201ENST00000296292 WASHC2CQ9Y4E1 1318 aa11.8□□□□□ -0.52
RFT1-201ENST00000296292 PTPRGP23470 1445 aa11.8□□□□□ -0.52
RFT1-201ENST00000296292 TIMELESSQ9UNS1 1208 aa11.8□□□□□ -0.52
RFT1-201ENST00000296292 RAD54L2Q9Y4B4 1467 aa11.79□□□□□ -0.52
RFT1-201ENST00000296292 FRAT1Q92837 279 aaPredicted RBP11.78□□□□□ -0.52
RFT1-201ENST00000296292 AEBP2Q6ZN18 517 aaPredicted RBP11.78□□□□□ -0.52
RFT1-201ENST00000296292 MORC1Q86VD1 984 aa11.78□□□□□ -0.52
RFT1-201ENST00000296292 L3MBTL2Q969R5 705 aa11.77□□□□□ -0.52
RFT1-201ENST00000296292 IGF1RP08069 1367 aa11.77□□□□□ -0.52
RFT1-201ENST00000296292 PAK3O75914 559 aaPredicted RBP11.76□□□□□ -0.53
RFT1-201ENST00000296292 RSPH4AQ5TD94 716 aa11.75□□□□□ -0.53
RFT1-201ENST00000296292 FTSJ3Q8IY81 847 aaKnown RBP11.75□□□□□ -0.53
RFT1-201ENST00000296292 FGD5Q6ZNL6 1462 aa11.75□□□□□ -0.53
RFT1-201ENST00000296292 AQRO60306 1485 aaKnown RBP eCLIP11.75□□□□□ -0.53
RFT1-201ENST00000296292 NUTM2FA1L443 756 aa11.74□□□□□ -0.53
RFT1-201ENST00000296292 GAPVD1Q14C86 1478 aa11.74□□□□□ -0.53
RFT1-201ENST00000296292 CCDC18Q5T9S5 1454 aa11.73□□□□□ -0.53
RFT1-201ENST00000296292 ROCK2O75116 1388 aaKnown RBP11.73□□□□□ -0.53
RFT1-201ENST00000296292 HDGFL2Q7Z4V5 671 aaPredicted RBP11.71□□□□□ -0.54
RFT1-201ENST00000296292 TRAK1Q9UPV9 953 aa11.7□□□□□ -0.54
RFT1-201ENST00000296292 UNC13AQ9UPW8 1703 aa11.69□□□□□ -0.54
RFT1-201ENST00000296292 EID1Q9Y6B2 187 aa11.69□□□□□ -0.54
RFT1-201ENST00000296292 ZNF644Q9H582 1327 aaPredicted RBP11.68□□□□□ -0.54
RFT1-201ENST00000296292 FAM69CQ0P6D2 419 aa11.68□□□□□ -0.54
RFT1-201ENST00000296292 U2AF1L5P0DN76 240 aaPredicted RBP11.68□□□□□ -0.54
RFT1-201ENST00000296292 U2AF1Q01081 240 aaKnown RBP eCLIP11.68□□□□□ -0.54
RFT1-201ENST00000296292 NPHP1O15259 732 aa11.67□□□□□ -0.54
RFT1-201ENST00000296292 RGS3P49796 1198 aa11.67□□□□□ -0.54
RFT1-201ENST00000296292 NBR1Q14596 966 aa11.67□□□□□ -0.54
RFT1-201ENST00000296292 NESP48681 1621 aa11.67□□□□□ -0.54
RFT1-201ENST00000296292 HMGXB3Q12766 1538 aa11.67□□□□□ -0.54
RFT1-201ENST00000296292 MRC2Q9UBG0 1479 aa11.66□□□□□ -0.54
RFT1-201ENST00000296292 PNNQ9H307 717 aaKnown RBP11.66□□□□□ -0.54
RFT1-201ENST00000296292 CSB-PGBD3P0DP91 1061 aa11.65□□□□□ -0.54
RFT1-201ENST00000296292 NGDNQ8NEJ9 315 aaKnown RBP11.64□□□□□ -0.55
RFT1-201ENST00000296292 ST20-MTHFSA0A0A6YYL1 179 aa11.63□□□□□ -0.55
RFT1-201ENST00000296292 KTN1Q86UP2 1357 aaKnown RBP11.63□□□□□ -0.55
RFT1-201ENST00000296292 RTF1Q92541 710 aaKnown RBP11.63□□□□□ -0.55
RFT1-201ENST00000296292 B4GALNT3Q6L9W6 998 aa11.63□□□□□ -0.55
RFT1-201ENST00000296292 ANP32BQ92688 251 aaKnown RBP11.63□□□□□ -0.55
RFT1-201ENST00000296292 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.62□□□□□ -0.55
RFT1-201ENST00000296292 OS9Q13438 667 aaPredicted RBP11.61□□□□□ -0.55
RFT1-201ENST00000296292 DNAJC5Q9H3Z4 198 aa11.61□□□□□ -0.55
RFT1-201ENST00000296292 TERF2IPQ9NYB0 399 aa11.61□□□□□ -0.55
RFT1-201ENST00000296292 CCER2I3L3R5 266 aa11.6□□□□□ -0.55
RFT1-201ENST00000296292 AFAP1Q8N556 730 aa11.6□□□□□ -0.55
RFT1-201ENST00000296292 LTV1Q96GA3 475 aaPredicted RBP11.6□□□□□ -0.55
RFT1-201ENST00000296292 ZNF330Q9Y3S2 320 aaPredicted RBP11.59□□□□□ -0.55
RFT1-201ENST00000296292 CCDC144AA2RUR9 1427 aa11.59□□□□□ -0.55
RFT1-201ENST00000296292 PPP4R2Q9NY27 417 aa11.58□□□□□ -0.56
RFT1-201ENST00000296292 CCDC9Q9Y3X0 531 aaKnown RBP11.58□□□□□ -0.56
RFT1-201ENST00000296292 VGFO15240 615 aaPredicted RBP11.58□□□□□ -0.56
RFT1-201ENST00000296292 LAMC3Q9Y6N6 1575 aa11.57□□□□□ -0.56
RFT1-201ENST00000296292 RALBP1Q15311 655 aa11.57□□□□□ -0.56
RFT1-201ENST00000296292 TAOK2Q9UL54 1235 aa11.56□□□□□ -0.56
RFT1-201ENST00000296292 CFTRP13569 1480 aa11.56□□□□□ -0.56
RFT1-201ENST00000296292 DHX57Q6P158 1386 aaKnown RBP11.56□□□□□ -0.56
RFT1-201ENST00000296292 MS4A1P11836 297 aa11.56□□□□□ -0.56
RFT1-201ENST00000296292 CCDC146Q8IYE0 955 aa11.56□□□□□ -0.56
RFT1-201ENST00000296292 EIF3AQ14152 1382 aaKnown RBP11.56□□□□□ -0.56
RFT1-201ENST00000296292 APBB1O00213 710 aa11.56□□□□□ -0.56
RFT1-201ENST00000296292 MINK1Q8N4C8 1332 aaPredicted RBP11.56□□□□□ -0.56
RFT1-201ENST00000296292 AMPHP49418 695 aa11.55□□□□□ -0.56
RFT1-201ENST00000296292 TPRNQ4KMQ1 711 aa11.55□□□□□ -0.56
RFT1-201ENST00000296292 BECN1Q14457 450 aa11.55□□□□□ -0.56
RFT1-201ENST00000296292 PANK3Q9H999 370 aa11.55□□□□□ -0.56
RFT1-201ENST00000296292 GRIN2BQ13224 1484 aa11.54□□□□□ -0.56
RFT1-201ENST00000296292 CHMP4BQ9H444 224 aaKnown RBP11.54□□□□□ -0.56
RFT1-201ENST00000296292 CASC1Q6TDU7 716 aa11.53□□□□□ -0.56
RFT1-201ENST00000296292 PHLDB1Q86UU1 1377 aa11.53□□□□□ -0.56
RFT1-201ENST00000296292 NLRP13Q86W25 1043 aa11.52□□□□□ -0.57
RFT1-201ENST00000296292 PRG4Q92954 1404 aaPredicted RBP11.52□□□□□ -0.57
RFT1-201ENST00000296292 KIF15Q9NS87 1388 aa11.52□□□□□ -0.57
RFT1-201ENST00000296292 MYOM3Q5VTT5 1437 aa11.51□□□□□ -0.57
RFT1-201ENST00000296292 GOLGA2Q08379 1002 aa11.51□□□□□ -0.57
RFT1-201ENST00000296292 RRP7AQ9Y3A4 280 aaKnown RBP11.51□□□□□ -0.57
RFT1-201ENST00000296292 KCNJ4P48050 445 aa11.5□□□□□ -0.57
RFT1-201ENST00000296292 CLUAP1Q96AJ1 413 aa11.5□□□□□ -0.57
RFT1-201ENST00000296292 RCAN3Q9UKA8 241 aa11.5□□□□□ -0.57
RFT1-201ENST00000296292 FGD6Q6ZV73 1430 aa11.49□□□□□ -0.57
RFT1-201ENST00000296292 IPO8O15397 1037 aaKnown RBP11.48□□□□□ -0.57
RFT1-201ENST00000296292 FGD1P98174 961 aa11.48□□□□□ -0.57
RFT1-201ENST00000296292 DDRGK1Q96HY6 314 aa11.48□□□□□ -0.57
RFT1-201ENST00000296292 IFT140Q96RY7 1462 aa11.48□□□□□ -0.57
RFT1-201ENST00000296292 NCLP19338 710 aaKnown RBP11.48□□□□□ -0.57
RFT1-201ENST00000296292 ELL2O00472 640 aaPredicted RBP11.47□□□□□ -0.57
RFT1-201ENST00000296292 CALD1Q05682 793 aaKnown RBP11.47□□□□□ -0.57
RFT1-201ENST00000296292 TMEM132EQ6IEE7 984 aa11.47□□□□□ -0.57
RFT1-201ENST00000296292 EVC2Q86UK5 1308 aa11.47□□□□□ -0.57
RFT1-201ENST00000296292 ITPRIPQ8IWB1 547 aa11.47□□□□□ -0.57
RFT1-201ENST00000296292 NAP1L2Q9ULW6 460 aaPredicted RBP11.46□□□□□ -0.57
RFT1-201ENST00000296292 TOPBP1Q92547 1522 aa11.46□□□□□ -0.57
RFT1-201ENST00000296292 POLA1P09884 1462 aaPredicted RBP11.46□□□□□ -0.57
RFT1-201ENST00000296292 STK31Q9BXU1 1019 aa11.46□□□□□ -0.58
RFT1-201ENST00000296292 KIF21BO75037 1637 aa11.46□□□□□ -0.58
RFT1-201ENST00000296292 SYNJ1O43426 1573 aa11.46□□□□□ -0.58
RFT1-201ENST00000296292 USP47Q96K76 1375 aa11.46□□□□□ -0.58
RFT1-201ENST00000296292 SMC4Q9NTJ3 1288 aa11.45□□□□□ -0.58
RFT1-201ENST00000296292 COG3Q96JB2 828 aa11.45□□□□□ -0.58
RFT1-201ENST00000296292 PRDM2Q13029 1718 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms