RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 KDM5BQ9UGL1 1544 aa16.81■□□□□ 0.28
RHO-201ENST00000296271 KIF14Q15058 1648 aa16.81■□□□□ 0.28
RHO-201ENST00000296271 GCC2Q8IWJ2 1684 aa16.8■□□□□ 0.28
RHO-201ENST00000296271 CFDP1Q9UEE9 299 aaPredicted RBP16.79■□□□□ 0.28
RHO-201ENST00000296271 CDK11AQ9UQ88 783 aaPredicted RBP16.79■□□□□ 0.28
RHO-201ENST00000296271 TROQ12816 1431 aaPredicted RBP16.77■□□□□ 0.27
RHO-201ENST00000296271 CARMIL2Q6F5E8 1435 aa16.75■□□□□ 0.27
RHO-201ENST00000296271 GPATCH8Q9UKJ3 1502 aaKnown RBP16.75■□□□□ 0.27
RHO-201ENST00000296271 L3MBTL2Q969R5 705 aa16.74■□□□□ 0.27
RHO-201ENST00000296271 DNMT1P26358 1616 aaKnown RBP16.74■□□□□ 0.27
RHO-201ENST00000296271 CAMSAP2Q08AD1 1489 aa16.73■□□□□ 0.27
RHO-201ENST00000296271 AKNAQ7Z591 1439 aa16.72■□□□□ 0.27
RHO-201ENST00000296271 SLC4A1APQ9BWU0 796 aaKnown RBP16.71■□□□□ 0.27
RHO-201ENST00000296271 ATP10BO94823 1461 aa16.71■□□□□ 0.27
RHO-201ENST00000296271 PLEKHD1A6NEE1 506 aa16.7■□□□□ 0.26
RHO-201ENST00000296271 HSPA5P11021 654 aaKnown RBP16.69■□□□□ 0.26
RHO-201ENST00000296271 NBPF8Q3BBV2 869 aa16.68■□□□□ 0.26
RHO-201ENST00000296271 ROCK1Q13464 1354 aa16.68■□□□□ 0.26
RHO-201ENST00000296271 ABCA8O94911 1581 aa16.67■□□□□ 0.26
RHO-201ENST00000296271 ANKRD30BQ9BXX2 1392 aa16.67■□□□□ 0.26
RHO-201ENST00000296271 NCOA1Q15788 1441 aa16.66■□□□□ 0.26
RHO-201ENST00000296271 HNRNPMP52272 730 aaKnown RBP eCLIP16.65■□□□□ 0.26
RHO-201ENST00000296271 C11orf95C9JLR9 678 aaPredicted RBP16.64■□□□□ 0.25
RHO-201ENST00000296271 PTPRGP23470 1445 aa16.64■□□□□ 0.25
RHO-201ENST00000296271 WASHC2AQ641Q2 1341 aa16.63■□□□□ 0.25
RHO-201ENST00000296271 CHD1O14646 1710 aa16.63■□□□□ 0.25
RHO-201ENST00000296271 PZPP20742 1482 aa16.62■□□□□ 0.25
RHO-201ENST00000296271 ERCC6L2Q5T890 1561 aa16.62■□□□□ 0.25
RHO-201ENST00000296271 CDC42BPAQ5VT25 1732 aa16.62■□□□□ 0.25
RHO-201ENST00000296271 ADCY10Q96PN6 1610 aa16.61■□□□□ 0.25
RHO-201ENST00000296271 ANP32CO43423 234 aa16.61■□□□□ 0.25
RHO-201ENST00000296271 ABCC10Q5T3U5 1492 aa16.61■□□□□ 0.25
RHO-201ENST00000296271 ITSN2Q9NZM3 1697 aa16.6■□□□□ 0.25
RHO-201ENST00000296271 PKD2Q13563 968 aa16.59■□□□□ 0.25
RHO-201ENST00000296271 ZNF326Q5BKZ1 582 aaKnown RBP16.58■□□□□ 0.25
RHO-201ENST00000296271 RPRD2Q5VT52 1461 aaKnown RBP16.58■□□□□ 0.24
RHO-201ENST00000296271 EIF4G2P78344 907 aaKnown RBP eCLIP16.57■□□□□ 0.24
RHO-201ENST00000296271 SUPT16HQ9Y5B9 1047 aaKnown RBP16.57■□□□□ 0.24
RHO-201ENST00000296271 TEX14Q8IWB6 1497 aa16.56■□□□□ 0.24
RHO-201ENST00000296271 ANKRD50Q9ULJ7 1429 aa16.55■□□□□ 0.24
RHO-201ENST00000296271 CROCC2H7BZ55 1655 aa16.55■□□□□ 0.24
RHO-201ENST00000296271 ANKRD30AQ9BXX3 1397 aa16.55■□□□□ 0.24
RHO-201ENST00000296271 C9orf84Q5VXU9 1444 aa16.54■□□□□ 0.24
RHO-201ENST00000296271 ADGBQ8N7X0 1667 aa16.54■□□□□ 0.24
RHO-201ENST00000296271 ADGRL2O95490 1459 aa16.53■□□□□ 0.24
RHO-201ENST00000296271 CCDC184Q52MB2 194 aa16.52■□□□□ 0.24
RHO-201ENST00000296271 NUP155O75694 1391 aa16.52■□□□□ 0.24
RHO-201ENST00000296271 TSPY4P0CV99 314 aa16.51■□□□□ 0.23
RHO-201ENST00000296271 TSPY10P0CW01 314 aa16.51■□□□□ 0.23
RHO-201ENST00000296271 CNGB1Q14028 1251 aaPredicted RBP16.51■□□□□ 0.23
RHO-201ENST00000296271 CCER2I3L3R5 266 aa16.5■□□□□ 0.23
RHO-201ENST00000296271 KIAA1107Q9UPP5 1409 aa16.49■□□□□ 0.23
RHO-201ENST00000296271 BCANQ96GW7 911 aa16.49■□□□□ 0.23
RHO-201ENST00000296271 MBD5Q9P267 1494 aa16.49■□□□□ 0.23
RHO-201ENST00000296271 CDC42BPBQ9Y5S2 1711 aa16.48■□□□□ 0.23
RHO-201ENST00000296271 KIF15Q9NS87 1388 aa16.48■□□□□ 0.23
RHO-201ENST00000296271 SAMD9LQ8IVG5 1584 aa16.48■□□□□ 0.23
RHO-201ENST00000296271 KDM2AQ9Y2K7 1162 aa16.46■□□□□ 0.23
RHO-201ENST00000296271 TTC37Q6PGP7 1564 aa16.46■□□□□ 0.23
RHO-201ENST00000296271 POLR3GLQ9BT43 218 aa16.46■□□□□ 0.23
RHO-201ENST00000296271 CCDC7Q96M83 1385 aa16.46■□□□□ 0.22
RHO-201ENST00000296271 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.44■□□□□ 0.22
RHO-201ENST00000296271 KIF7Q2M1P5 1343 aa16.44■□□□□ 0.22
RHO-201ENST00000296271 SHROOM2Q13796 1616 aa16.44■□□□□ 0.22
RHO-201ENST00000296271 SPATA31E1Q6ZUB1 1445 aa16.43■□□□□ 0.22
RHO-201ENST00000296271 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.43■□□□□ 0.22
RHO-201ENST00000296271 SYCP2Q9BX26 1530 aa16.43■□□□□ 0.22
RHO-201ENST00000296271 ARHGAP5Q13017 1502 aa16.41■□□□□ 0.22
RHO-201ENST00000296271 SHANK2Q9UPX8 1470 aa16.41■□□□□ 0.22
RHO-201ENST00000296271 PREX2Q70Z35 1606 aa16.41■□□□□ 0.22
RHO-201ENST00000296271 CNTLNQ9NXG0 1405 aa16.41■□□□□ 0.22
RHO-201ENST00000296271 FKBP8Q14318 412 aa16.4■□□□□ 0.22
RHO-201ENST00000296271 HNRNPUQ00839 825 aaKnown RBP eCLIP16.39■□□□□ 0.22
RHO-201ENST00000296271 CCDC141Q6ZP82 1450 aa16.39■□□□□ 0.21
RHO-201ENST00000296271 PELP1Q8IZL8 1130 aaKnown RBP16.38■□□□□ 0.21
RHO-201ENST00000296271 DCAF11Q8TEB1 546 aa16.38■□□□□ 0.21
RHO-201ENST00000296271 ABCC2Q92887 1545 aa16.38■□□□□ 0.21
RHO-201ENST00000296271 ARHGEF12Q9NZN5 1544 aa16.37■□□□□ 0.21
RHO-201ENST00000296271 ARHGEF5Q12774 1597 aa16.37■□□□□ 0.21
RHO-201ENST00000296271 RGL3Q3MIN7 710 aa16.37■□□□□ 0.21
RHO-201ENST00000296271 PRKRIP1Q9H875 184 aaPredicted RBP16.36■□□□□ 0.21
RHO-201ENST00000296271 USP47Q96K76 1375 aa16.36■□□□□ 0.21
RHO-201ENST00000296271 SENP3-EIF4A1A0A087X0R7 540 aa16.36■□□□□ 0.21
RHO-201ENST00000296271 BCORL1Q5H9F3 1711 aa16.36■□□□□ 0.21
RHO-201ENST00000296271 FAM9BQ8IZU0 186 aa16.35■□□□□ 0.21
RHO-201ENST00000296271 PLEKHH2Q8IVE3 1493 aa16.33■□□□□ 0.21
RHO-201ENST00000296271 FAM135AQ9P2D6 1515 aa16.33■□□□□ 0.2
RHO-201ENST00000296271 CARD11Q9BXL7 1154 aa16.32■□□□□ 0.2
RHO-201ENST00000296271 ZCCHC11Q5TAX3 1644 aaKnown RBP16.32■□□□□ 0.2
RHO-201ENST00000296271 CLASP1Q7Z460 1538 aa16.31■□□□□ 0.2
RHO-201ENST00000296271 IRX6P78412 446 aaPredicted RBP16.31■□□□□ 0.2
RHO-201ENST00000296271 MRS2Q9HD23 443 aa16.31■□□□□ 0.2
RHO-201ENST00000296271 KDM5DQ9BY66 1539 aa16.3■□□□□ 0.2
RHO-201ENST00000296271 ST20-MTHFSA0A0A6YYL1 179 aa16.3■□□□□ 0.2
RHO-201ENST00000296271 AFAP1Q8N556 730 aa16.3■□□□□ 0.2
RHO-201ENST00000296271 MYO5CQ9NQX4 1742 aa16.29■□□□□ 0.2
RHO-201ENST00000296271 TRAPPC8Q9Y2L5 1435 aa16.29■□□□□ 0.2
RHO-201ENST00000296271 PLA2R1Q13018 1463 aa16.29■□□□□ 0.2
RHO-201ENST00000296271 NBPF1Q3BBV0 1214 aa16.28■□□□□ 0.2
RHO-201ENST00000296271 KDM5CP41229 1560 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms