RNA–Protein interactions for RNA: ENST00000295887.5

CDS1-201, Transcript of CDP-diacylglycerol synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDS1, Length 4,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDS1-201ENST00000295887 CARMIL2Q6F5E8 1435 aa21.65■■□□□ 1.06
CDS1-201ENST00000295887 CFTRP13569 1480 aa21.65■■□□□ 1.06
CDS1-201ENST00000295887 ROCK2O75116 1388 aaKnown RBP21.65■■□□□ 1.06
CDS1-201ENST00000295887 BECN1Q14457 450 aa21.65■■□□□ 1.06
CDS1-201ENST00000295887 KTN1Q86UP2 1357 aaKnown RBP21.65■■□□□ 1.06
CDS1-201ENST00000295887 ST20-MTHFSA0A0A6YYL1 179 aa21.63■■□□□ 1.05
CDS1-201ENST00000295887 HNRNPMP52272 730 aaKnown RBP eCLIP21.63■■□□□ 1.05
CDS1-201ENST00000295887 ANKRD30AQ9BXX3 1397 aa21.63■■□□□ 1.05
CDS1-201ENST00000295887 CFAP53Q96M91 514 aa21.63■■□□□ 1.05
CDS1-201ENST00000295887 FGD6Q6ZV73 1430 aa21.63■■□□□ 1.05
CDS1-201ENST00000295887 AQRO60306 1485 aaKnown RBP eCLIP21.62■■□□□ 1.05
CDS1-201ENST00000295887 GAPVD1Q14C86 1478 aa21.62■■□□□ 1.05
CDS1-201ENST00000295887 PRXQ9BXM0 1461 aa21.61■■□□□ 1.05
CDS1-201ENST00000295887 RALBP1Q15311 655 aa21.61■■□□□ 1.05
CDS1-201ENST00000295887 ANP32BQ92688 251 aaKnown RBP21.61■■□□□ 1.05
CDS1-201ENST00000295887 FTSJ3Q8IY81 847 aaKnown RBP21.59■■□□□ 1.05
CDS1-201ENST00000295887 ZNF644Q9H582 1327 aaPredicted RBP21.57■■□□□ 1.04
CDS1-201ENST00000295887 ZBED9Q6R2W3 1325 aa21.56■■□□□ 1.04
CDS1-201ENST00000295887 WASHC2AQ641Q2 1341 aa21.56■■□□□ 1.04
CDS1-201ENST00000295887 NLRP13Q86W25 1043 aa21.56■■□□□ 1.04
CDS1-201ENST00000295887 ERICH3Q5RHP9 1530 aa21.56■■□□□ 1.04
CDS1-201ENST00000295887 UACAQ9BZF9 1416 aa21.54■■□□□ 1.04
CDS1-201ENST00000295887 CUX1P39880 1505 aa21.53■■□□□ 1.04
CDS1-201ENST00000295887 CC2D2AQ9P2K1 1620 aa21.53■■□□□ 1.04
CDS1-201ENST00000295887 U2SURPO15042 1029 aaKnown RBP21.52■■□□□ 1.04
CDS1-201ENST00000295887 TCERG1O14776 1098 aaKnown RBP21.52■■□□□ 1.04
CDS1-201ENST00000295887 IPO9Q96P70 1041 aaKnown RBP21.52■■□□□ 1.04
CDS1-201ENST00000295887 MYH16Q9H6N6 1097 aa21.51■■□□□ 1.03
CDS1-201ENST00000295887 MYOM3Q5VTT5 1437 aa21.5■■□□□ 1.03
CDS1-201ENST00000295887 USP47Q96K76 1375 aa21.5■■□□□ 1.03
CDS1-201ENST00000295887 KIF7Q2M1P5 1343 aa21.49■■□□□ 1.03
CDS1-201ENST00000295887 GGT6Q6P531 493 aa21.49■■□□□ 1.03
CDS1-201ENST00000295887 SAFB2Q14151 953 aaKnown RBP eCLIP21.49■■□□□ 1.03
CDS1-201ENST00000295887 PLIN1O60240 522 aa21.48■■□□□ 1.03
CDS1-201ENST00000295887 CCDC7Q96M83 1385 aa21.48■■□□□ 1.03
CDS1-201ENST00000295887 MAPK8IP3Q9UPT6 1336 aa21.47■■□□□ 1.03
CDS1-201ENST00000295887 PLEKHG5O94827 1062 aa21.47■■□□□ 1.03
CDS1-201ENST00000295887 ARID4BQ4LE39 1312 aaPredicted RBP21.47■■□□□ 1.03
CDS1-201ENST00000295887 EXOC6Q8TAG9 804 aa21.47■■□□□ 1.03
CDS1-201ENST00000295887 MORC1Q86VD1 984 aa21.46■■□□□ 1.03
CDS1-201ENST00000295887 MLECQ14165 292 aa21.45■■□□□ 1.03
CDS1-201ENST00000295887 TOP2BQ02880 1626 aa21.45■■□□□ 1.02
CDS1-201ENST00000295887 MYBBP1AQ9BQG0 1328 aaKnown RBP21.44■■□□□ 1.02
CDS1-201ENST00000295887 CCDC146Q8IYE0 955 aa21.44■■□□□ 1.02
CDS1-201ENST00000295887 CASKIN1Q8WXD9 1431 aa21.43■■□□□ 1.02
CDS1-201ENST00000295887 KIF15Q9NS87 1388 aa21.43■■□□□ 1.02
CDS1-201ENST00000295887 EFCAB2Q5VUJ9 269 aa21.43■■□□□ 1.02
CDS1-201ENST00000295887 PANK3Q9H999 370 aa21.43■■□□□ 1.02
CDS1-201ENST00000295887 HMGXB3Q12766 1538 aa21.42■■□□□ 1.02
CDS1-201ENST00000295887 NCOA2Q15596 1464 aa21.42■■□□□ 1.02
CDS1-201ENST00000295887 POGKQ9P215 609 aa21.41■■□□□ 1.02
CDS1-201ENST00000295887 WDR97A6NE52 1622 aa21.41■■□□□ 1.02
CDS1-201ENST00000295887 FANCIQ9NVI1 1328 aa21.41■■□□□ 1.02
CDS1-201ENST00000295887 SPRYD3Q8NCJ5 442 aa21.41■■□□□ 1.02
CDS1-201ENST00000295887 CCDC184Q52MB2 194 aa21.4■■□□□ 1.02
CDS1-201ENST00000295887 PDE3BQ13370 1112 aa21.4■■□□□ 1.02
CDS1-201ENST00000295887 GOLGA2Q08379 1002 aa21.39■■□□□ 1.01
CDS1-201ENST00000295887 POLA1P09884 1462 aaPredicted RBP21.39■■□□□ 1.01
CDS1-201ENST00000295887 CNTLNQ9NXG0 1405 aa21.38■■□□□ 1.01
CDS1-201ENST00000295887 RRP1P56182 461 aaKnown RBP21.37■■□□□ 1.01
CDS1-201ENST00000295887 TOPBP1Q92547 1522 aa21.37■■□□□ 1.01
CDS1-201ENST00000295887 PTPRGP23470 1445 aa21.37■■□□□ 1.01
CDS1-201ENST00000295887 KANK1Q14678 1352 aa21.35■■□□□ 1.01
CDS1-201ENST00000295887 PDE4AP27815 886 aa21.35■■□□□ 1.01
CDS1-201ENST00000295887 NBPF8Q3BBV2 869 aa21.35■■□□□ 1.01
CDS1-201ENST00000295887 KIF3BO15066 747 aa21.35■■□□□ 1.01
CDS1-201ENST00000295887 SRPK2P78362 688 aaKnown RBP21.35■■□□□ 1.01
CDS1-201ENST00000295887 SLKQ9H2G2 1235 aaPredicted RBP21.35■■□□□ 1.01
CDS1-201ENST00000295887 NCLP19338 710 aaKnown RBP21.33■■□□□ 1
CDS1-201ENST00000295887 CLUAP1Q96AJ1 413 aa21.33■■□□□ 1
CDS1-201ENST00000295887 TRIM44Q96DX7 344 aaPredicted RBP21.33■■□□□ 1
CDS1-201ENST00000295887 STK26Q9P289 416 aa21.33■■□□□ 1
CDS1-201ENST00000295887 UNC13AQ9UPW8 1703 aa21.33■■□□□ 1
CDS1-201ENST00000295887 U2AF1L5P0DN76 240 aaPredicted RBP21.33■■□□□ 1
CDS1-201ENST00000295887 U2AF1Q01081 240 aaKnown RBP eCLIP21.33■■□□□ 1
CDS1-201ENST00000295887 TIAM1Q13009 1591 aa21.32■■□□□ 1
CDS1-201ENST00000295887 SLC4A3P48751 1232 aa21.32■■□□□ 1
CDS1-201ENST00000295887 CCDC144AA2RUR9 1427 aa21.32■■□□□ 1
CDS1-201ENST00000295887 FYCO1Q9BQS8 1478 aa21.3■■□□□ 1
CDS1-201ENST00000295887 CRBNQ96SW2 442 aa21.3■■□□□ 1
CDS1-201ENST00000295887 GOLGA6L22H0YM25 854 aa21.29■■□□□ 1
CDS1-201ENST00000295887 RSPH4AQ5TD94 716 aa21.28■■□□□ 1
CDS1-201ENST00000295887 SPAG9O60271 1321 aaKnown RBP21.27■■□□□ 1
CDS1-201ENST00000295887 MS4A1P11836 297 aa21.26■□□□□ 0.99
CDS1-201ENST00000295887 HFM1A2PYH4 1435 aa21.26■□□□□ 0.99
CDS1-201ENST00000295887 C14orf37Q86TY3 774 aa21.26■□□□□ 0.99
CDS1-201ENST00000295887 RRP7AQ9Y3A4 280 aaKnown RBP21.26■□□□□ 0.99
CDS1-201ENST00000295887 ZBTB7CA1YPR0 619 aa21.25■□□□□ 0.99
CDS1-201ENST00000295887 NUTM2DQ5VT03 806 aaPredicted RBP21.25■□□□□ 0.99
CDS1-201ENST00000295887 HSP90AB1P08238 724 aaKnown RBP21.23■□□□□ 0.99
CDS1-201ENST00000295887 TPRNQ4KMQ1 711 aa21.23■□□□□ 0.99
CDS1-201ENST00000295887 BCL2L13Q9BXK5 485 aa21.22■□□□□ 0.99
CDS1-201ENST00000295887 GRIN2BQ13224 1484 aa21.22■□□□□ 0.99
CDS1-201ENST00000295887 APAF1O14727 1248 aa21.21■□□□□ 0.99
CDS1-201ENST00000295887 TRAK1Q9UPV9 953 aa21.21■□□□□ 0.99
CDS1-201ENST00000295887 CDCA7LQ96GN5 454 aa21.2■□□□□ 0.98
CDS1-201ENST00000295887 SOX12O15370 315 aa21.2■□□□□ 0.98
CDS1-201ENST00000295887 CENPJQ9HC77 1338 aaPredicted RBP21.2■□□□□ 0.98
CDS1-201ENST00000295887 GLIPR1L2Q4G1C9 344 aa21.2■□□□□ 0.98
CDS1-201ENST00000295887 HSCBQ8IWL3 235 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms