RNA–Protein interactions for RNA: ENST00000290460.7

SCUBE1-201, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene SCUBE1, Length 2,258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-201ENST00000290460 MAGI1Q96QZ7 1491 aaPredicted RBP28.16■■■□□ 2.1
SCUBE1-201ENST00000290460 PRG4Q92954 1404 aaPredicted RBP28.14■■■□□ 2.09
SCUBE1-201ENST00000290460 PLB1Q6P1J6 1458 aa28.13■■■□□ 2.09
SCUBE1-201ENST00000290460 CDK11AQ9UQ88 783 aaPredicted RBP28.13■■■□□ 2.09
SCUBE1-201ENST00000290460 SYNJ2O15056 1496 aa28.12■■■□□ 2.09
SCUBE1-201ENST00000290460 CCER2I3L3R5 266 aa28.11■■■□□ 2.09
SCUBE1-201ENST00000290460 ROCK1Q13464 1354 aa28.11■■■□□ 2.09
SCUBE1-201ENST00000290460 TROQ12816 1431 aaPredicted RBP28.07■■■□□ 2.08
SCUBE1-201ENST00000290460 HSPA5P11021 654 aaKnown RBP28.06■■■□□ 2.08
SCUBE1-201ENST00000290460 L3MBTL2Q969R5 705 aa28.06■■■□□ 2.08
SCUBE1-201ENST00000290460 KIF14Q15058 1648 aa28.05■■■□□ 2.08
SCUBE1-201ENST00000290460 CAMSAP2Q08AD1 1489 aa28.03■■■□□ 2.08
SCUBE1-201ENST00000290460 WASHC2AQ641Q2 1341 aa28.01■■■□□ 2.07
SCUBE1-201ENST00000290460 ANKRD30BQ9BXX2 1392 aa28.01■■■□□ 2.07
SCUBE1-201ENST00000290460 CFDP1Q9UEE9 299 aaPredicted RBP28.01■■■□□ 2.07
SCUBE1-201ENST00000290460 ITSN2Q9NZM3 1697 aa28■■■□□ 2.07
SCUBE1-201ENST00000290460 JPH4Q96JJ6 628 aa28■■■□□ 2.07
SCUBE1-201ENST00000290460 ZNF777Q9ULD5 760 aaPredicted RBP27.99■■■□□ 2.07
SCUBE1-201ENST00000290460 GPATCH8Q9UKJ3 1502 aaKnown RBP27.99■■■□□ 2.07
SCUBE1-201ENST00000290460 NUP160Q12769 1436 aa27.99■■■□□ 2.07
SCUBE1-201ENST00000290460 SLC4A1APQ9BWU0 796 aaKnown RBP27.98■■■□□ 2.07
SCUBE1-201ENST00000290460 CARMIL2Q6F5E8 1435 aa27.98■■■□□ 2.07
SCUBE1-201ENST00000290460 RPRD2Q5VT52 1461 aaKnown RBP27.97■■■□□ 2.07
SCUBE1-201ENST00000290460 EIF4G2P78344 907 aaKnown RBP eCLIP27.97■■■□□ 2.07
SCUBE1-201ENST00000290460 ADCY10Q96PN6 1610 aa27.96■■■□□ 2.07
SCUBE1-201ENST00000290460 ADGBQ8N7X0 1667 aa27.93■■■□□ 2.06
SCUBE1-201ENST00000290460 TEX14Q8IWB6 1497 aa27.93■■■□□ 2.06
SCUBE1-201ENST00000290460 NCOA1Q15788 1441 aa27.91■■■□□ 2.06
SCUBE1-201ENST00000290460 NBPF8Q3BBV2 869 aa27.91■■■□□ 2.06
SCUBE1-201ENST00000290460 CROCC2H7BZ55 1655 aa27.9■■■□□ 2.06
SCUBE1-201ENST00000290460 PZPP20742 1482 aa27.89■■■□□ 2.06
SCUBE1-201ENST00000290460 BCANQ96GW7 911 aa27.89■■■□□ 2.05
SCUBE1-201ENST00000290460 FKBP8Q14318 412 aa27.87■■■□□ 2.05
SCUBE1-201ENST00000290460 C11orf95C9JLR9 678 aaPredicted RBP27.87■■■□□ 2.05
SCUBE1-201ENST00000290460 CDC42BPAQ5VT25 1732 aa27.85■■■□□ 2.05
SCUBE1-201ENST00000290460 ABCA8O94911 1581 aa27.85■■■□□ 2.05
SCUBE1-201ENST00000290460 ADGRL2O95490 1459 aa27.82■■■□□ 2.04
SCUBE1-201ENST00000290460 PLEKHD1A6NEE1 506 aa27.81■■■□□ 2.04
SCUBE1-201ENST00000290460 ATP10BO94823 1461 aa27.81■■■□□ 2.04
SCUBE1-201ENST00000290460 CNTLNQ9NXG0 1405 aa27.8■■■□□ 2.04
SCUBE1-201ENST00000290460 CCDC7Q96M83 1385 aa27.78■■■□□ 2.04
SCUBE1-201ENST00000290460 ANKRD30AQ9BXX3 1397 aa27.78■■■□□ 2.04
SCUBE1-201ENST00000290460 ABCC10Q5T3U5 1492 aa27.77■■■□□ 2.04
SCUBE1-201ENST00000290460 ANKRD50Q9ULJ7 1429 aa27.74■■■□□ 2.03
SCUBE1-201ENST00000290460 KIAA1107Q9UPP5 1409 aa27.74■■■□□ 2.03
SCUBE1-201ENST00000290460 HNRNPUQ00839 825 aaKnown RBP eCLIP27.74■■■□□ 2.03
SCUBE1-201ENST00000290460 PKD2Q13563 968 aa27.74■■■□□ 2.03
SCUBE1-201ENST00000290460 SPATA31E1Q6ZUB1 1445 aa27.72■■■□□ 2.03
SCUBE1-201ENST00000290460 NEFLP07196 543 aa27.71■■■□□ 2.03
SCUBE1-201ENST00000290460 CCDC184Q52MB2 194 aa27.71■■■□□ 2.03
SCUBE1-201ENST00000290460 TSHZ2Q9NRE2 1034 aa27.7■■■□□ 2.03
SCUBE1-201ENST00000290460 C9orf84Q5VXU9 1444 aa27.69■■■□□ 2.02
SCUBE1-201ENST00000290460 POLR1AO95602 1720 aaPredicted RBP27.69■■■□□ 2.02
SCUBE1-201ENST00000290460 KIF7Q2M1P5 1343 aa27.68■■■□□ 2.02
SCUBE1-201ENST00000290460 MBD5Q9P267 1494 aa27.67■■■□□ 2.02
SCUBE1-201ENST00000290460 ZNF326Q5BKZ1 582 aaKnown RBP27.67■■■□□ 2.02
SCUBE1-201ENST00000290460 SHANK2Q9UPX8 1470 aa27.65■■■□□ 2.02
SCUBE1-201ENST00000290460 PRKRIP1Q9H875 184 aaPredicted RBP27.65■■■□□ 2.02
SCUBE1-201ENST00000290460 PTPRGP23470 1445 aa27.64■■■□□ 2.02
SCUBE1-201ENST00000290460 NUP155O75694 1391 aa27.64■■■□□ 2.01
SCUBE1-201ENST00000290460 HNRNPMP52272 730 aaKnown RBP eCLIP27.64■■■□□ 2.01
SCUBE1-201ENST00000290460 TSPY4P0CV99 314 aa27.6■■■□□ 2.01
SCUBE1-201ENST00000290460 TSPY10P0CW01 314 aa27.6■■■□□ 2.01
SCUBE1-201ENST00000290460 CHD1O14646 1710 aa27.6■■■□□ 2.01
SCUBE1-201ENST00000290460 CDC42BPBQ9Y5S2 1711 aa27.58■■■□□ 2
SCUBE1-201ENST00000290460 KIF15Q9NS87 1388 aa27.56■■■□□ 2
SCUBE1-201ENST00000290460 BCORL1Q5H9F3 1711 aa27.56■■■□□ 2
SCUBE1-201ENST00000290460 USP47Q96K76 1375 aa27.56■■■□□ 2
SCUBE1-201ENST00000290460 SAMD9LQ8IVG5 1584 aa27.55■■■□□ 2
SCUBE1-201ENST00000290460 FAM9BQ8IZU0 186 aa27.54■■■□□ 2
SCUBE1-201ENST00000290460 MRS2Q9HD23 443 aa27.54■■■□□ 2
SCUBE1-201ENST00000290460 ARHGEF5Q12774 1597 aa27.54■■■□□ 2
SCUBE1-201ENST00000290460 PREX2Q70Z35 1606 aa27.52■■■□□ 2
SCUBE1-201ENST00000290460 KDM5DQ9BY66 1539 aa27.51■■■□□ 2
SCUBE1-201ENST00000290460 KDM5CP41229 1560 aa27.51■■□□□ 1.99
SCUBE1-201ENST00000290460 POLR3GLQ9BT43 218 aa27.51■■□□□ 1.99
SCUBE1-201ENST00000290460 CCDC141Q6ZP82 1450 aa27.48■■□□□ 1.99
SCUBE1-201ENST00000290460 CNGB1Q14028 1251 aaPredicted RBP27.47■■□□□ 1.99
SCUBE1-201ENST00000290460 IRX6P78412 446 aaPredicted RBP27.46■■□□□ 1.99
SCUBE1-201ENST00000290460 TTC37Q6PGP7 1564 aa27.45■■□□□ 1.98
SCUBE1-201ENST00000290460 UHRF1BP1Q6BDS2 1440 aa27.44■■□□□ 1.98
SCUBE1-201ENST00000290460 KDM2AQ9Y2K7 1162 aa27.44■■□□□ 1.98
SCUBE1-201ENST00000290460 RALGAPBQ86X10 1494 aa27.43■■□□□ 1.98
SCUBE1-201ENST00000290460 DHX29Q7Z478 1369 aaKnown RBP27.43■■□□□ 1.98
SCUBE1-201ENST00000290460 ERCC6L2Q5T890 1561 aa27.43■■□□□ 1.98
SCUBE1-201ENST00000290460 SYCP2Q9BX26 1530 aa27.43■■□□□ 1.98
SCUBE1-201ENST00000290460 SHROOM2Q13796 1616 aa27.42■■□□□ 1.98
SCUBE1-201ENST00000290460 ARHGEF12Q9NZN5 1544 aa27.42■■□□□ 1.98
SCUBE1-201ENST00000290460 FAM135AQ9P2D6 1515 aa27.4■■□□□ 1.98
SCUBE1-201ENST00000290460 CARD11Q9BXL7 1154 aa27.4■■□□□ 1.98
SCUBE1-201ENST00000290460 ARHGAP5Q13017 1502 aa27.4■■□□□ 1.98
SCUBE1-201ENST00000290460 DCAF11Q8TEB1 546 aa27.38■■□□□ 1.97
SCUBE1-201ENST00000290460 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.38■■□□□ 1.97
SCUBE1-201ENST00000290460 ZBED9Q6R2W3 1325 aa27.34■■□□□ 1.97
SCUBE1-201ENST00000290460 RSPH4AQ5TD94 716 aa27.33■■□□□ 1.97
SCUBE1-201ENST00000290460 MYO5CQ9NQX4 1742 aa27.32■■□□□ 1.96
SCUBE1-201ENST00000290460 ABCC2Q92887 1545 aa27.31■■□□□ 1.96
SCUBE1-201ENST00000290460 ST20-MTHFSA0A0A6YYL1 179 aa27.3■■□□□ 1.96
SCUBE1-201ENST00000290460 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.3■■□□□ 1.96
SCUBE1-201ENST00000290460 ARID4BQ4LE39 1312 aaPredicted RBP27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms