RNA–Protein interactions for RNA: ENST00000288135.5

KIT-201, Transcript of KIT proto-oncogene receptor tyrosine kinase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KIT, Length 5,186 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIT-201ENST00000288135 ANKRD30AQ9BXX3 1397 aa11.07□□□□□ -0.64
KIT-201ENST00000288135 AFAP1Q8N556 730 aa11.07□□□□□ -0.64
KIT-201ENST00000288135 PPP1R15AO75807 674 aaPredicted RBP11.06□□□□□ -0.64
KIT-201ENST00000288135 EPRSP07814 1512 aaKnown RBP11.05□□□□□ -0.64
KIT-201ENST00000288135 SPAG9O60271 1321 aaKnown RBP11.05□□□□□ -0.64
KIT-201ENST00000288135 HSPA5P11021 654 aaKnown RBP11.04□□□□□ -0.64
KIT-201ENST00000288135 NUTM2DQ5VT03 806 aaPredicted RBP11.04□□□□□ -0.64
KIT-201ENST00000288135 HNRNPUQ00839 825 aaKnown RBP eCLIP11.03□□□□□ -0.64
KIT-201ENST00000288135 MAGI1Q96QZ7 1491 aaPredicted RBP11.03□□□□□ -0.64
KIT-201ENST00000288135 MRS2Q9HD23 443 aa11□□□□□ -0.65
KIT-201ENST00000288135 EIF4G3O43432 1585 aaKnown RBP10.99□□□□□ -0.65
KIT-201ENST00000288135 SAFB2Q14151 953 aaKnown RBP eCLIP10.98□□□□□ -0.65
KIT-201ENST00000288135 TROQ12816 1431 aaPredicted RBP10.98□□□□□ -0.65
KIT-201ENST00000288135 FAM69CQ0P6D2 419 aa10.98□□□□□ -0.65
KIT-201ENST00000288135 ARHGEF11O15085 1522 aa10.98□□□□□ -0.65
KIT-201ENST00000288135 WDR62O43379 1518 aa10.98□□□□□ -0.65
KIT-201ENST00000288135 KIF15Q9NS87 1388 aa10.97□□□□□ -0.65
KIT-201ENST00000288135 PLEKHG5O94827 1062 aa10.96□□□□□ -0.65
KIT-201ENST00000288135 ADAMTS12P58397 1594 aa10.96□□□□□ -0.65
KIT-201ENST00000288135 THOC2Q8NI27 1593 aaKnown RBP10.96□□□□□ -0.65
KIT-201ENST00000288135 TMC1Q8TDI8 760 aa10.96□□□□□ -0.65
KIT-201ENST00000288135 HECW1Q76N89 1606 aa10.96□□□□□ -0.66
KIT-201ENST00000288135 SCAF1Q9H7N4 1312 aaKnown RBP10.96□□□□□ -0.66
KIT-201ENST00000288135 EHBP1L1Q8N3D4 1523 aa10.95□□□□□ -0.66
KIT-201ENST00000288135 UACAQ9BZF9 1416 aa10.95□□□□□ -0.66
KIT-201ENST00000288135 TARBP1Q13395 1621 aaKnown RBP10.95□□□□□ -0.66
KIT-201ENST00000288135 ABCA5Q8WWZ7 1642 aa10.95□□□□□ -0.66
KIT-201ENST00000288135 IRX6P78412 446 aaPredicted RBP10.94□□□□□ -0.66
KIT-201ENST00000288135 PTPRKQ15262 1439 aa10.94□□□□□ -0.66
KIT-201ENST00000288135 ARHGAP5Q13017 1502 aa10.94□□□□□ -0.66
KIT-201ENST00000288135 RAPGEF3O95398 923 aa10.94□□□□□ -0.66
KIT-201ENST00000288135 ANKRD50Q9ULJ7 1429 aa10.93□□□□□ -0.66
KIT-201ENST00000288135 RSPH4AQ5TD94 716 aa10.93□□□□□ -0.66
KIT-201ENST00000288135 TIMELESSQ9UNS1 1208 aa10.93□□□□□ -0.66
KIT-201ENST00000288135 WASHC2CQ9Y4E1 1318 aa10.92□□□□□ -0.66
KIT-201ENST00000288135 STK26Q9P289 416 aa10.92□□□□□ -0.66
KIT-201ENST00000288135 KANK1Q14678 1352 aa10.92□□□□□ -0.66
KIT-201ENST00000288135 CC2D1BQ5T0F9 858 aaKnown RBP10.92□□□□□ -0.66
KIT-201ENST00000288135 NUP153P49790 1475 aaKnown RBP10.92□□□□□ -0.66
KIT-201ENST00000288135 NAIPQ13075 1403 aa10.91□□□□□ -0.66
KIT-201ENST00000288135 CTTNBP2Q8WZ74 1663 aa10.91□□□□□ -0.66
KIT-201ENST00000288135 TNNT2P45379 298 aaPredicted RBP10.91□□□□□ -0.66
KIT-201ENST00000288135 SUPT6HQ7KZ85 1726 aaKnown RBP10.91□□□□□ -0.66
KIT-201ENST00000288135 DAPK1P53355 1430 aa10.9□□□□□ -0.66
KIT-201ENST00000288135 FKBP8Q14318 412 aa10.9□□□□□ -0.66
KIT-201ENST00000288135 PBRM1Q86U86 1689 aa10.9□□□□□ -0.66
KIT-201ENST00000288135 DISP1Q96F81 1524 aa10.89□□□□□ -0.67
KIT-201ENST00000288135 ATP10BO94823 1461 aa10.89□□□□□ -0.67
KIT-201ENST00000288135 HFM1A2PYH4 1435 aa10.89□□□□□ -0.67
KIT-201ENST00000288135 ST20-MTHFSA0A0A6YYL1 179 aa10.88□□□□□ -0.67
KIT-201ENST00000288135 ROCK2O75116 1388 aaKnown RBP10.88□□□□□ -0.67
KIT-201ENST00000288135 C9orf84Q5VXU9 1444 aa10.88□□□□□ -0.67
KIT-201ENST00000288135 ABCC5O15440 1437 aa10.88□□□□□ -0.67
KIT-201ENST00000288135 SCAPERQ9BY12 1400 aa10.88□□□□□ -0.67
KIT-201ENST00000288135 MIA2Q96PC5 1412 aa10.87□□□□□ -0.67
KIT-201ENST00000288135 NBPF8Q3BBV2 869 aa10.87□□□□□ -0.67
KIT-201ENST00000288135 PTPN23Q9H3S7 1636 aa10.86□□□□□ -0.67
KIT-201ENST00000288135 KIAA0556O60303 1618 aa10.85□□□□□ -0.67
KIT-201ENST00000288135 CCDC144AA2RUR9 1427 aa10.85□□□□□ -0.67
KIT-201ENST00000288135 CEP170Q5SW79 1584 aa10.85□□□□□ -0.67
KIT-201ENST00000288135 MAP3K1Q13233 1512 aa10.85□□□□□ -0.67
KIT-201ENST00000288135 CAMSAP2Q08AD1 1489 aa10.85□□□□□ -0.67
KIT-201ENST00000288135 UGGT2Q9NYU1 1516 aa10.84□□□□□ -0.67
KIT-201ENST00000288135 NUP160Q12769 1436 aa10.83□□□□□ -0.67
KIT-201ENST00000288135 POGKQ9P215 609 aa10.83□□□□□ -0.68
KIT-201ENST00000288135 RAPGEF6Q8TEU7 1601 aa10.83□□□□□ -0.68
KIT-201ENST00000288135 GPATCH8Q9UKJ3 1502 aaKnown RBP10.83□□□□□ -0.68
KIT-201ENST00000288135 BCL11AQ9H165 835 aa10.83□□□□□ -0.68
KIT-201ENST00000288135 TRAK1Q9UPV9 953 aa10.83□□□□□ -0.68
KIT-201ENST00000288135 KNSTRNQ9Y448 316 aa10.82□□□□□ -0.68
KIT-201ENST00000288135 NBPF1Q3BBV0 1214 aa10.82□□□□□ -0.68
KIT-201ENST00000288135 MAGI3Q5TCQ9 1506 aa10.82□□□□□ -0.68
KIT-201ENST00000288135 SLC24A1O60721 1099 aa10.82□□□□□ -0.68
KIT-201ENST00000288135 PPM1GO15355 546 aaPredicted RBP10.81□□□□□ -0.68
KIT-201ENST00000288135 TMF1P82094 1093 aa10.8□□□□□ -0.68
KIT-201ENST00000288135 WDR97A6NE52 1622 aa10.8□□□□□ -0.68
KIT-201ENST00000288135 NCOA1Q15788 1441 aa10.79□□□□□ -0.68
KIT-201ENST00000288135 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.79□□□□□ -0.68
KIT-201ENST00000288135 NUTM2FA1L443 756 aa10.79□□□□□ -0.68
KIT-201ENST00000288135 WDR43Q15061 677 aaKnown RBP eCLIP10.78□□□□□ -0.68
KIT-201ENST00000288135 NEUROD2Q15784 382 aa10.78□□□□□ -0.68
KIT-201ENST00000288135 USP47Q96K76 1375 aa10.78□□□□□ -0.68
KIT-201ENST00000288135 SRPK2P78362 688 aaKnown RBP10.78□□□□□ -0.68
KIT-201ENST00000288135 TMEM132EQ6IEE7 984 aa10.78□□□□□ -0.68
KIT-201ENST00000288135 SOX12O15370 315 aa10.77□□□□□ -0.68
KIT-201ENST00000288135 ZBTB7CA1YPR0 619 aa10.77□□□□□ -0.69
KIT-201ENST00000288135 C14orf37Q86TY3 774 aa10.77□□□□□ -0.69
KIT-201ENST00000288135 SUPT16HQ9Y5B9 1047 aaKnown RBP10.77□□□□□ -0.69
KIT-201ENST00000288135 SAMD9Q5K651 1589 aa10.77□□□□□ -0.69
KIT-201ENST00000288135 KIF14Q15058 1648 aa10.76□□□□□ -0.69
KIT-201ENST00000288135 WASHC2AQ641Q2 1341 aa10.76□□□□□ -0.69
KIT-201ENST00000288135 AKNAQ7Z591 1439 aa10.75□□□□□ -0.69
KIT-201ENST00000288135 CD109Q6YHK3 1445 aa10.75□□□□□ -0.69
KIT-201ENST00000288135 CFAP70Q5T0N1 1121 aa10.75□□□□□ -0.69
KIT-201ENST00000288135 KIAA1107Q9UPP5 1409 aa10.74□□□□□ -0.69
KIT-201ENST00000288135 PLEKHH2Q8IVE3 1493 aa10.74□□□□□ -0.69
KIT-201ENST00000288135 KIF7Q2M1P5 1343 aa10.74□□□□□ -0.69
KIT-201ENST00000288135 CFAP43Q8NDM7 1665 aa10.74□□□□□ -0.69
KIT-201ENST00000288135 CCDC141Q6ZP82 1450 aa10.74□□□□□ -0.69
KIT-201ENST00000288135 C11orf95C9JLR9 678 aaPredicted RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms