RNA–Protein interactions for RNA: ENST00000282470.10

SPARCL1-201, Transcript of SPARC like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARCL1, Length 2,906 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-201ENST00000282470 TONSLQ96HA7 1378 aa10.41□□□□□ -0.74
SPARCL1-201ENST00000282470 PRG4Q92954 1404 aaPredicted RBP10.4□□□□□ -0.74
SPARCL1-201ENST00000282470 JPH4Q96JJ6 628 aa10.4□□□□□ -0.75
SPARCL1-201ENST00000282470 GTF3C3Q9Y5Q9 886 aa10.4□□□□□ -0.75
SPARCL1-201ENST00000282470 CAMSAP2Q08AD1 1489 aa10.4□□□□□ -0.75
SPARCL1-201ENST00000282470 GPATCH8Q9UKJ3 1502 aaKnown RBP10.39□□□□□ -0.75
SPARCL1-201ENST00000282470 YTHDC1Q96MU7 727 aaKnown RBP10.38□□□□□ -0.75
SPARCL1-201ENST00000282470 RRP7BPQ9NSQ0 103 aa10.38□□□□□ -0.75
SPARCL1-201ENST00000282470 ADGRL2O95490 1459 aa10.38□□□□□ -0.75
SPARCL1-201ENST00000282470 ARID3CA6NKF2 412 aa10.37□□□□□ -0.75
SPARCL1-201ENST00000282470 CDC42BPAQ5VT25 1732 aa10.37□□□□□ -0.75
SPARCL1-201ENST00000282470 SHROOM2Q13796 1616 aa10.37□□□□□ -0.75
SPARCL1-201ENST00000282470 CHD1O14646 1710 aa10.37□□□□□ -0.75
SPARCL1-201ENST00000282470 CHIC2Q9UKJ5 165 aa10.37□□□□□ -0.75
SPARCL1-201ENST00000282470 ABCC10Q5T3U5 1492 aa10.36□□□□□ -0.75
SPARCL1-201ENST00000282470 FBLN2P98095 1184 aa10.35□□□□□ -0.75
SPARCL1-201ENST00000282470 ATP10BO94823 1461 aa10.35□□□□□ -0.75
SPARCL1-201ENST00000282470 SHANK2Q9UPX8 1470 aa10.34□□□□□ -0.75
SPARCL1-201ENST00000282470 ZNF644Q9H582 1327 aaPredicted RBP10.34□□□□□ -0.75
SPARCL1-201ENST00000282470 MPHOSPH9Q99550 1183 aa10.34□□□□□ -0.75
SPARCL1-201ENST00000282470 NCOA1Q15788 1441 aa10.33□□□□□ -0.76
SPARCL1-201ENST00000282470 RPRD2Q5VT52 1461 aaKnown RBP10.32□□□□□ -0.76
SPARCL1-201ENST00000282470 ANKRD30BQ9BXX2 1392 aa10.32□□□□□ -0.76
SPARCL1-201ENST00000282470 CFDP1Q9UEE9 299 aaPredicted RBP10.32□□□□□ -0.76
SPARCL1-201ENST00000282470 PZPP20742 1482 aa10.31□□□□□ -0.76
SPARCL1-201ENST00000282470 ARHGEF5Q12774 1597 aa10.31□□□□□ -0.76
SPARCL1-201ENST00000282470 TEX14Q8IWB6 1497 aa10.31□□□□□ -0.76
SPARCL1-201ENST00000282470 TRIM52Q96A61 297 aa10.3□□□□□ -0.76
SPARCL1-201ENST00000282470 PREX2Q70Z35 1606 aa10.3□□□□□ -0.76
SPARCL1-201ENST00000282470 PTPRGP23470 1445 aa10.29□□□□□ -0.76
SPARCL1-201ENST00000282470 PLEKHD1A6NEE1 506 aa10.28□□□□□ -0.76
SPARCL1-201ENST00000282470 DDX10Q13206 875 aaKnown RBP10.28□□□□□ -0.76
SPARCL1-201ENST00000282470 KDM5DQ9BY66 1539 aa10.28□□□□□ -0.76
SPARCL1-201ENST00000282470 ANKRD30AQ9BXX3 1397 aa10.28□□□□□ -0.76
SPARCL1-201ENST00000282470 CDC42BPBQ9Y5S2 1711 aa10.28□□□□□ -0.76
SPARCL1-201ENST00000282470 C9orf84Q5VXU9 1444 aa10.26□□□□□ -0.77
SPARCL1-201ENST00000282470 POLR1AO95602 1720 aaPredicted RBP10.26□□□□□ -0.77
SPARCL1-201ENST00000282470 SAMD9LQ8IVG5 1584 aa10.26□□□□□ -0.77
SPARCL1-201ENST00000282470 MBD5Q9P267 1494 aa10.25□□□□□ -0.77
SPARCL1-201ENST00000282470 CCER2I3L3R5 266 aa10.25□□□□□ -0.77
SPARCL1-201ENST00000282470 ABCC2Q92887 1545 aa10.25□□□□□ -0.77
SPARCL1-201ENST00000282470 KIAA1107Q9UPP5 1409 aa10.25□□□□□ -0.77
SPARCL1-201ENST00000282470 CLASP1Q7Z460 1538 aa10.25□□□□□ -0.77
SPARCL1-201ENST00000282470 ANKRD50Q9ULJ7 1429 aa10.25□□□□□ -0.77
SPARCL1-201ENST00000282470 MAST1Q9Y2H9 1570 aa10.24□□□□□ -0.77
SPARCL1-201ENST00000282470 L3MBTL2Q969R5 705 aa10.24□□□□□ -0.77
SPARCL1-201ENST00000282470 SLC4A1APQ9BWU0 796 aaKnown RBP10.24□□□□□ -0.77
SPARCL1-201ENST00000282470 HIRIP3Q9BW71 556 aaPredicted RBP10.23□□□□□ -0.77
SPARCL1-201ENST00000282470 TTC37Q6PGP7 1564 aa10.23□□□□□ -0.77
SPARCL1-201ENST00000282470 FOXD1Q16676 465 aa10.23□□□□□ -0.77
SPARCL1-201ENST00000282470 CCDC141Q6ZP82 1450 aa10.23□□□□□ -0.77
SPARCL1-201ENST00000282470 ERCC6L2Q5T890 1561 aa10.22□□□□□ -0.77
SPARCL1-201ENST00000282470 KCNH8Q96L42 1107 aa10.22□□□□□ -0.77
SPARCL1-201ENST00000282470 ZNF777Q9ULD5 760 aaPredicted RBP10.22□□□□□ -0.77
SPARCL1-201ENST00000282470 MYO5CQ9NQX4 1742 aa10.22□□□□□ -0.77
SPARCL1-201ENST00000282470 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.22□□□□□ -0.77
SPARCL1-201ENST00000282470 ANP32CO43423 234 aa10.21□□□□□ -0.78
SPARCL1-201ENST00000282470 HSPA5P11021 654 aaKnown RBP10.21□□□□□ -0.78
SPARCL1-201ENST00000282470 UHRF1BP1LA0JNW5 1464 aa10.21□□□□□ -0.78
SPARCL1-201ENST00000282470 SPATA31E1Q6ZUB1 1445 aa10.21□□□□□ -0.78
SPARCL1-201ENST00000282470 EIF4G2P78344 907 aaKnown RBP eCLIP10.2□□□□□ -0.78
SPARCL1-201ENST00000282470 PLXNC1O60486 1568 aa10.2□□□□□ -0.78
SPARCL1-201ENST00000282470 WASHC2AQ641Q2 1341 aa10.2□□□□□ -0.78
SPARCL1-201ENST00000282470 ARHGEF12Q9NZN5 1544 aa10.19□□□□□ -0.78
SPARCL1-201ENST00000282470 KIF15Q9NS87 1388 aa10.19□□□□□ -0.78
SPARCL1-201ENST00000282470 UNC13BO14795 1591 aa10.19□□□□□ -0.78
SPARCL1-201ENST00000282470 RSPH4AQ5TD94 716 aa10.19□□□□□ -0.78
SPARCL1-201ENST00000282470 ZCCHC11Q5TAX3 1644 aaKnown RBP10.19□□□□□ -0.78
SPARCL1-201ENST00000282470 PLEKHH2Q8IVE3 1493 aa10.18□□□□□ -0.78
SPARCL1-201ENST00000282470 SYCP2Q9BX26 1530 aa10.18□□□□□ -0.78
SPARCL1-201ENST00000282470 CNTLNQ9NXG0 1405 aa10.18□□□□□ -0.78
SPARCL1-201ENST00000282470 NBPF8Q3BBV2 869 aa10.17□□□□□ -0.78
SPARCL1-201ENST00000282470 UHRF1BP1Q6BDS2 1440 aa10.17□□□□□ -0.78
SPARCL1-201ENST00000282470 TSPY4P0CV99 314 aa10.17□□□□□ -0.78
SPARCL1-201ENST00000282470 TSPY10P0CW01 314 aa10.17□□□□□ -0.78
SPARCL1-201ENST00000282470 ARHGAP5Q13017 1502 aa10.17□□□□□ -0.78
SPARCL1-201ENST00000282470 PKD2Q13563 968 aa10.16□□□□□ -0.78
SPARCL1-201ENST00000282470 CCDC7Q96M83 1385 aa10.16□□□□□ -0.78
SPARCL1-201ENST00000282470 NUP155O75694 1391 aa10.15□□□□□ -0.78
SPARCL1-201ENST00000282470 FAM135AQ9P2D6 1515 aa10.15□□□□□ -0.78
SPARCL1-201ENST00000282470 KDM5CP41229 1560 aa10.15□□□□□ -0.78
SPARCL1-201ENST00000282470 HNRNPMP52272 730 aaKnown RBP eCLIP10.15□□□□□ -0.78
SPARCL1-201ENST00000282470 RALGAPBQ86X10 1494 aa10.14□□□□□ -0.79
SPARCL1-201ENST00000282470 IQGAP3Q86VI3 1631 aa10.14□□□□□ -0.79
SPARCL1-201ENST00000282470 ARAP3Q8WWN8 1544 aa10.14□□□□□ -0.79
SPARCL1-201ENST00000282470 MAGI2Q86UL8 1455 aa10.14□□□□□ -0.79
SPARCL1-201ENST00000282470 PLCH2O75038 1416 aa10.12□□□□□ -0.79
SPARCL1-201ENST00000282470 ABCC1P33527 1531 aa10.12□□□□□ -0.79
SPARCL1-201ENST00000282470 SUPT16HQ9Y5B9 1047 aaKnown RBP10.12□□□□□ -0.79
SPARCL1-201ENST00000282470 DUOX2Q9NRD8 1548 aa10.12□□□□□ -0.79
SPARCL1-201ENST00000282470 BCORL1Q5H9F3 1711 aa10.11□□□□□ -0.79
SPARCL1-201ENST00000282470 C11orf95C9JLR9 678 aaPredicted RBP10.11□□□□□ -0.79
SPARCL1-201ENST00000282470 ERBINQ96RT1 1412 aa10.11□□□□□ -0.79
SPARCL1-201ENST00000282470 KIF7Q2M1P5 1343 aa10.09□□□□□ -0.79
SPARCL1-201ENST00000282470 ARID4BQ4LE39 1312 aaPredicted RBP10.09□□□□□ -0.79
SPARCL1-201ENST00000282470 USP47Q96K76 1375 aa10.09□□□□□ -0.79
SPARCL1-201ENST00000282470 ATP10AO60312 1499 aa10.09□□□□□ -0.79
SPARCL1-201ENST00000282470 TRPM1Q7Z4N2 1603 aa10.08□□□□□ -0.8
SPARCL1-201ENST00000282470 LAMC1P11047 1609 aa10.07□□□□□ -0.8
SPARCL1-201ENST00000282470 PLA2R1Q13018 1463 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms