RNA–Protein interactions for RNA: ENST00000276585.8

MRPS28-201, Transcript of mitochondrial ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS28, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-201ENST00000276585 ZMYM4Q5VZL5 1548 aa20.83■□□□□ 0.93
MRPS28-201ENST00000276585 IQSEC2Q5JU85 1478 aa20.82■□□□□ 0.92
MRPS28-201ENST00000276585 LTBP4Q8N2S1 1624 aa20.81■□□□□ 0.92
MRPS28-201ENST00000276585 ARHGEF12Q9NZN5 1544 aa20.8■□□□□ 0.92
MRPS28-201ENST00000276585 MAGI2Q86UL8 1455 aa20.8■□□□□ 0.92
MRPS28-201ENST00000276585 CFAP74Q9C0B2 1584 aa20.8■□□□□ 0.92
MRPS28-201ENST00000276585 PHF23Q9BUL5 403 aaPredicted RBP20.79■□□□□ 0.92
MRPS28-201ENST00000276585 UBAP1LF5GYI3 381 aa20.77■□□□□ 0.92
MRPS28-201ENST00000276585 HECW1Q76N89 1606 aa20.75■□□□□ 0.91
MRPS28-201ENST00000276585 RAPGEF6Q8TEU7 1601 aa20.74■□□□□ 0.91
MRPS28-201ENST00000276585 EEA1Q15075 1411 aa20.71■□□□□ 0.91
MRPS28-201ENST00000276585 C9orf84Q5VXU9 1444 aa20.71■□□□□ 0.91
MRPS28-201ENST00000276585 ATP10AO60312 1499 aa20.71■□□□□ 0.91
MRPS28-201ENST00000276585 PLEKHD1A6NEE1 506 aa20.71■□□□□ 0.91
MRPS28-201ENST00000276585 SETD1BQ9UPS6 1966 aaKnown RBP20.7■□□□□ 0.9
MRPS28-201ENST00000276585 CSRNP3Q8WYN3 585 aa20.67■□□□□ 0.9
MRPS28-201ENST00000276585 SCAPERQ9BY12 1400 aa20.67■□□□□ 0.9
MRPS28-201ENST00000276585 NUP153P49790 1475 aaKnown RBP20.66■□□□□ 0.9
MRPS28-201ENST00000276585 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.66■□□□□ 0.9
MRPS28-201ENST00000276585 MED1Q15648 1581 aaPredicted RBP20.66■□□□□ 0.9
MRPS28-201ENST00000276585 NCOA1Q15788 1441 aa20.63■□□□□ 0.89
MRPS28-201ENST00000276585 SAMD9Q5K651 1589 aa20.63■□□□□ 0.89
MRPS28-201ENST00000276585 ZNF335Q9H4Z2 1342 aaPredicted RBP20.61■□□□□ 0.89
MRPS28-201ENST00000276585 SCAF1Q9H7N4 1312 aaKnown RBP20.61■□□□□ 0.89
MRPS28-201ENST00000276585 ESF1Q9H501 851 aaKnown RBP20.61■□□□□ 0.89
MRPS28-201ENST00000276585 HSPA1LP34931 641 aa20.58■□□□□ 0.89
MRPS28-201ENST00000276585 MYT1LQ9UL68 1186 aa20.58■□□□□ 0.89
MRPS28-201ENST00000276585 TRAPPC8Q9Y2L5 1435 aa20.57■□□□□ 0.88
MRPS28-201ENST00000276585 C3P01024 1663 aa20.57■□□□□ 0.88
MRPS28-201ENST00000276585 PIP4K2BP78356 416 aa20.54■□□□□ 0.88
MRPS28-201ENST00000276585 NCKAP5LQ9HCH0 1330 aa20.53■□□□□ 0.88
MRPS28-201ENST00000276585 CAMSAP1Q5T5Y3 1602 aa20.53■□□□□ 0.88
MRPS28-201ENST00000276585 PLCH2O75038 1416 aa20.53■□□□□ 0.88
MRPS28-201ENST00000276585 RANGAP1P46060 587 aaPredicted RBP20.5■□□□□ 0.87
MRPS28-201ENST00000276585 EFCAB2Q5VUJ9 269 aa20.49■□□□□ 0.87
MRPS28-201ENST00000276585 ZNF518AQ6AHZ1 1483 aa20.48■□□□□ 0.87
MRPS28-201ENST00000276585 AFAP1Q8N556 730 aa20.46■□□□□ 0.87
MRPS28-201ENST00000276585 DIP2CQ9Y2E4 1556 aa20.44■□□□□ 0.86
MRPS28-201ENST00000276585 TOM1O60784 492 aa20.44■□□□□ 0.86
MRPS28-201ENST00000276585 PKD2Q13563 968 aa20.42■□□□□ 0.86
MRPS28-201ENST00000276585 CNTLNQ9NXG0 1405 aa20.42■□□□□ 0.86
MRPS28-201ENST00000276585 REREQ9P2R6 1566 aa20.42■□□□□ 0.86
MRPS28-201ENST00000276585 AGLP35573 1532 aa20.4■□□□□ 0.86
MRPS28-201ENST00000276585 KDM5CP41229 1560 aa20.4■□□□□ 0.86
MRPS28-201ENST00000276585 CDK13Q14004 1512 aaKnown RBP20.4■□□□□ 0.86
MRPS28-201ENST00000276585 PPP6R1Q9UPN7 881 aa20.4■□□□□ 0.86
MRPS28-201ENST00000276585 NPATQ14207 1427 aa20.39■□□□□ 0.85
MRPS28-201ENST00000276585 MYO5CQ9NQX4 1742 aa20.38■□□□□ 0.85
MRPS28-201ENST00000276585 ABCA6Q8N139 1617 aa20.37■□□□□ 0.85
MRPS28-201ENST00000276585 PLA2R1Q13018 1463 aa20.37■□□□□ 0.85
MRPS28-201ENST00000276585 ARHGAP5Q13017 1502 aa20.35■□□□□ 0.85
MRPS28-201ENST00000276585 TCOF1Q13428 1488 aaKnown RBP20.33■□□□□ 0.85
MRPS28-201ENST00000276585 MLH3Q9UHC1 1453 aa20.32■□□□□ 0.84
MRPS28-201ENST00000276585 ZMYM3Q14202 1370 aa20.32■□□□□ 0.84
MRPS28-201ENST00000276585 SUPT6HQ7KZ85 1726 aaKnown RBP20.3■□□□□ 0.84
MRPS28-201ENST00000276585 ATP1B4Q9UN42 357 aaPredicted RBP20.3■□□□□ 0.84
MRPS28-201ENST00000276585 ARHGAP35Q9NRY4 1499 aa20.29■□□□□ 0.84
MRPS28-201ENST00000276585 CPS1P31327 1500 aa20.28■□□□□ 0.84
MRPS28-201ENST00000276585 MYO3AQ8NEV4 1616 aa20.28■□□□□ 0.84
MRPS28-201ENST00000276585 CEP170BQ9Y4F5 1589 aaPredicted RBP20.28■□□□□ 0.84
MRPS28-201ENST00000276585 MROH2AA6NES4 1674 aa20.28■□□□□ 0.84
MRPS28-201ENST00000276585 ZNF142P52746 1687 aaPredicted RBP20.27■□□□□ 0.84
MRPS28-201ENST00000276585 EHMT2Q96KQ7 1210 aa20.27■□□□□ 0.84
MRPS28-201ENST00000276585 PTPRKQ15262 1439 aa20.26■□□□□ 0.83
MRPS28-201ENST00000276585 CDK11AQ9UQ88 783 aaPredicted RBP20.25■□□□□ 0.83
MRPS28-201ENST00000276585 KIF14Q15058 1648 aa20.24■□□□□ 0.83
MRPS28-201ENST00000276585 UBTFP17480 764 aaKnown RBP20.23■□□□□ 0.83
MRPS28-201ENST00000276585 SHANK2Q9UPX8 1470 aa20.23■□□□□ 0.83
MRPS28-201ENST00000276585 RGS17Q9UGC6 210 aaPredicted RBP20.21■□□□□ 0.83
MRPS28-201ENST00000276585 LRRIQ1Q96JM4 1722 aa20.21■□□□□ 0.83
MRPS28-201ENST00000276585 KIDINS220Q9ULH0 1771 aa20.18■□□□□ 0.82
MRPS28-201ENST00000276585 CLIP1P30622 1438 aa20.18■□□□□ 0.82
MRPS28-201ENST00000276585 CLTCQ00610 1675 aaKnown RBP20.17■□□□□ 0.82
MRPS28-201ENST00000276585 ABCC1P33527 1531 aa20.17■□□□□ 0.82
MRPS28-201ENST00000276585 TROQ12816 1431 aaPredicted RBP20.16■□□□□ 0.82
MRPS28-201ENST00000276585 FMN1Q68DA7 1419 aa20.15■□□□□ 0.82
MRPS28-201ENST00000276585 ALKQ9UM73 1620 aa20.15■□□□□ 0.82
MRPS28-201ENST00000276585 ITSN2Q9NZM3 1697 aa20.14■□□□□ 0.81
MRPS28-201ENST00000276585 A2ML1A8K2U0 1454 aa20.14■□□□□ 0.81
MRPS28-201ENST00000276585 CDC42BPBQ9Y5S2 1711 aa20.13■□□□□ 0.81
MRPS28-201ENST00000276585 GGT6Q6P531 493 aa20.11■□□□□ 0.81
MRPS28-201ENST00000276585 DNMT1P26358 1616 aaKnown RBP20.11■□□□□ 0.81
MRPS28-201ENST00000276585 POLR1AO95602 1720 aaPredicted RBP20.1■□□□□ 0.81
MRPS28-201ENST00000276585 NEURL4Q96JN8 1562 aa20.1■□□□□ 0.81
MRPS28-201ENST00000276585 POTEAQ6S8J7 498 aa20.09■□□□□ 0.81
MRPS28-201ENST00000276585 VWDEQ8N2E2 1590 aa20.08■□□□□ 0.8
MRPS28-201ENST00000276585 PREX2Q70Z35 1606 aa20.07■□□□□ 0.8
MRPS28-201ENST00000276585 SPAG9O60271 1321 aaKnown RBP20.06■□□□□ 0.8
MRPS28-201ENST00000276585 ANKLE2Q86XL3 938 aa20.06■□□□□ 0.8
MRPS28-201ENST00000276585 SAMD9LQ8IVG5 1584 aa20.05■□□□□ 0.8
MRPS28-201ENST00000276585 ZNF777Q9ULD5 760 aaPredicted RBP20.04■□□□□ 0.8
MRPS28-201ENST00000276585 RNF17Q9BXT8 1623 aaKnown RBP20.02■□□□□ 0.79
MRPS28-201ENST00000276585 CASKIN1Q8WXD9 1431 aa20.02■□□□□ 0.79
MRPS28-201ENST00000276585 A2MP01023 1474 aa20.01■□□□□ 0.79
MRPS28-201ENST00000276585 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.01■□□□□ 0.79
MRPS28-201ENST00000276585 NPHP4O75161 1426 aaPredicted RBP20.01■□□□□ 0.79
MRPS28-201ENST00000276585 TNRQ92752 1358 aa20■□□□□ 0.79
MRPS28-201ENST00000276585 SETD1AO15047 1707 aaKnown RBP19.99■□□□□ 0.79
MRPS28-201ENST00000276585 LRRC7Q96NW7 1537 aa19.99■□□□□ 0.79
MRPS28-201ENST00000276585 PLXNC1O60486 1568 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms