RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 TAOK2Q9UL54 1235 aa10.96□□□□□ -0.65
SCUBE3-201ENST00000274938 TNIKQ9UKE5 1360 aa10.96□□□□□ -0.65
SCUBE3-201ENST00000274938 HSP90AA2PQ14568 343 aaPredicted RBP10.96□□□□□ -0.65
SCUBE3-201ENST00000274938 POGKQ9P215 609 aa10.96□□□□□ -0.65
SCUBE3-201ENST00000274938 CFDP1Q9UEE9 299 aaPredicted RBP10.96□□□□□ -0.65
SCUBE3-201ENST00000274938 PHF14O94880 888 aa10.96□□□□□ -0.66
SCUBE3-201ENST00000274938 PMFBP1Q8TBY8 1022 aa10.95□□□□□ -0.66
SCUBE3-201ENST00000274938 CHMP7Q8WUX9 453 aaPredicted RBP10.95□□□□□ -0.66
SCUBE3-201ENST00000274938 CALD1Q05682 793 aaKnown RBP10.95□□□□□ -0.66
SCUBE3-201ENST00000274938 SCRIBQ14160 1630 aa10.95□□□□□ -0.66
SCUBE3-201ENST00000274938 GZF1Q9H116 711 aaPredicted RBP10.94□□□□□ -0.66
SCUBE3-201ENST00000274938 CHMP4AQ9BY43 222 aa10.93□□□□□ -0.66
SCUBE3-201ENST00000274938 KTN1Q86UP2 1357 aaKnown RBP10.93□□□□□ -0.66
SCUBE3-201ENST00000274938 CLSTN1O94985 981 aa10.93□□□□□ -0.66
SCUBE3-201ENST00000274938 SLKQ9H2G2 1235 aaPredicted RBP10.93□□□□□ -0.66
SCUBE3-201ENST00000274938 RCAN3Q9UKA8 241 aa10.93□□□□□ -0.66
SCUBE3-201ENST00000274938 DDX11L8A8MPP1 907 aa10.92□□□□□ -0.66
SCUBE3-201ENST00000274938 A0A0U1RQG5 324 aaPredicted RBP10.92□□□□□ -0.66
SCUBE3-201ENST00000274938 SIN3AQ96ST3 1273 aa10.91□□□□□ -0.66
SCUBE3-201ENST00000274938 NPHP1O15259 732 aa10.91□□□□□ -0.66
SCUBE3-201ENST00000274938 TSHZ2Q9NRE2 1034 aa10.91□□□□□ -0.66
SCUBE3-201ENST00000274938 MORC1Q86VD1 984 aa10.91□□□□□ -0.66
SCUBE3-201ENST00000274938 SENP3Q9H4L4 574 aaPredicted RBP10.91□□□□□ -0.66
SCUBE3-201ENST00000274938 CEP164Q9UPV0 1460 aa10.91□□□□□ -0.66
SCUBE3-201ENST00000274938 RALBP1Q15311 655 aa10.91□□□□□ -0.66
SCUBE3-201ENST00000274938 TPM3P06753 285 aa10.91□□□□□ -0.66
SCUBE3-201ENST00000274938 HDAC5Q9UQL6 1122 aa10.9□□□□□ -0.67
SCUBE3-201ENST00000274938 SKOR2Q2VWA4 1001 aaPredicted RBP10.89□□□□□ -0.67
SCUBE3-201ENST00000274938 GPS2Q13227 327 aa10.89□□□□□ -0.67
SCUBE3-201ENST00000274938 RTF1Q92541 710 aaKnown RBP10.88□□□□□ -0.67
SCUBE3-201ENST00000274938 KIF3AQ9Y496 699 aa10.87□□□□□ -0.67
SCUBE3-201ENST00000274938 PDE3BQ13370 1112 aa10.87□□□□□ -0.67
SCUBE3-201ENST00000274938 HMMRO75330 724 aa10.87□□□□□ -0.67
SCUBE3-201ENST00000274938 GPATCH3Q96I76 525 aa10.87□□□□□ -0.67
SCUBE3-201ENST00000274938 KCNH8Q96L42 1107 aa10.87□□□□□ -0.67
SCUBE3-201ENST00000274938 CCNB3Q8WWL7 1395 aa10.87□□□□□ -0.67
SCUBE3-201ENST00000274938 ITPRIPQ8IWB1 547 aa10.87□□□□□ -0.67
SCUBE3-201ENST00000274938 MFAP1P55081 439 aaKnown RBP10.86□□□□□ -0.67
SCUBE3-201ENST00000274938 CHMP4CQ96CF2 233 aa10.86□□□□□ -0.67
SCUBE3-201ENST00000274938 ST18O60284 1047 aa10.85□□□□□ -0.67
SCUBE3-201ENST00000274938 HSPA5P11021 654 aaKnown RBP10.85□□□□□ -0.67
SCUBE3-201ENST00000274938 KANK1Q14678 1352 aa10.85□□□□□ -0.67
SCUBE3-201ENST00000274938 HDGFP51858 240 aaKnown RBP10.84□□□□□ -0.67
SCUBE3-201ENST00000274938 VSIG10Q8N0Z9 540 aa10.84□□□□□ -0.67
SCUBE3-201ENST00000274938 KIF27Q86VH2 1401 aa10.84□□□□□ -0.67
SCUBE3-201ENST00000274938 CALRP27797 417 aaKnown RBP10.84□□□□□ -0.67
SCUBE3-201ENST00000274938 DCAF11Q8TEB1 546 aa10.84□□□□□ -0.67
SCUBE3-201ENST00000274938 CEP89Q96ST8 783 aa10.83□□□□□ -0.68
SCUBE3-201ENST00000274938 HSP90B1P14625 803 aaKnown RBP10.83□□□□□ -0.68
SCUBE3-201ENST00000274938 GSE1Q14687 1217 aa10.83□□□□□ -0.68
SCUBE3-201ENST00000274938 FHAD1B1AJZ9 1412 aa10.83□□□□□ -0.68
SCUBE3-201ENST00000274938 CCDC70Q6NSX1 233 aa10.83□□□□□ -0.68
SCUBE3-201ENST00000274938 ATP6V1DQ9Y5K8 247 aa10.83□□□□□ -0.68
SCUBE3-201ENST00000274938 ISY1Q9ULR0 285 aaKnown RBP10.82□□□□□ -0.68
SCUBE3-201ENST00000274938 HDGFL2Q7Z4V5 671 aaPredicted RBP10.82□□□□□ -0.68
SCUBE3-201ENST00000274938 LMOD2Q6P5Q4 547 aa10.82□□□□□ -0.68
SCUBE3-201ENST00000274938 WRNQ14191 1432 aaPredicted RBP eCLIP10.81□□□□□ -0.68
SCUBE3-201ENST00000274938 SETD5Q9C0A6 1442 aa10.81□□□□□ -0.68
SCUBE3-201ENST00000274938 PHLDB1Q86UU1 1377 aa10.81□□□□□ -0.68
SCUBE3-201ENST00000274938 APBB1O00213 710 aa10.81□□□□□ -0.68
SCUBE3-201ENST00000274938 KIF16BQ96L93 1317 aa10.81□□□□□ -0.68
SCUBE3-201ENST00000274938 TEX35Q5T0J7 233 aa10.81□□□□□ -0.68
SCUBE3-201ENST00000274938 ZNF771Q7L3S4 317 aaPredicted RBP10.81□□□□□ -0.68
SCUBE3-201ENST00000274938 MYO15BQ96JP2 1530 aa10.8□□□□□ -0.68
SCUBE3-201ENST00000274938 SRPK2P78362 688 aaKnown RBP10.8□□□□□ -0.68
SCUBE3-201ENST00000274938 NCBP3Q53F19 620 aaKnown RBP10.8□□□□□ -0.68
SCUBE3-201ENST00000274938 STK31Q9BXU1 1019 aa10.8□□□□□ -0.68
SCUBE3-201ENST00000274938 TSR1Q2NL82 804 aaKnown RBP10.79□□□□□ -0.68
SCUBE3-201ENST00000274938 TPM1P09493 284 aa10.79□□□□□ -0.68
SCUBE3-201ENST00000274938 RASSF8Q8NHQ8 419 aa10.79□□□□□ -0.68
SCUBE3-201ENST00000274938 GOLGA6L19H0YKK7 550 aa10.78□□□□□ -0.68
SCUBE3-201ENST00000274938 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.78□□□□□ -0.68
SCUBE3-201ENST00000274938 U2AF1L5P0DN76 240 aaPredicted RBP10.78□□□□□ -0.68
SCUBE3-201ENST00000274938 U2AF1Q01081 240 aaKnown RBP eCLIP10.78□□□□□ -0.68
SCUBE3-201ENST00000274938 DDX49Q9Y6V7 483 aaKnown RBP10.78□□□□□ -0.68
SCUBE3-201ENST00000274938 CENPQQ7L2Z9 268 aaPredicted RBP10.78□□□□□ -0.68
SCUBE3-201ENST00000274938 SMC4Q9NTJ3 1288 aa10.78□□□□□ -0.68
SCUBE3-201ENST00000274938 CENPJQ9HC77 1338 aaPredicted RBP10.78□□□□□ -0.68
SCUBE3-201ENST00000274938 SF3A1Q15459 793 aaKnown RBP10.77□□□□□ -0.68
SCUBE3-201ENST00000274938 FAM161AQ3B820 660 aa10.77□□□□□ -0.68
SCUBE3-201ENST00000274938 ROCK2O75116 1388 aaKnown RBP10.77□□□□□ -0.68
SCUBE3-201ENST00000274938 TRIM6-TRIM34B2RNG4 842 aa10.77□□□□□ -0.68
SCUBE3-201ENST00000274938 SPAG9O60271 1321 aaKnown RBP10.77□□□□□ -0.69
SCUBE3-201ENST00000274938 TPM2P07951 284 aa10.77□□□□□ -0.69
SCUBE3-201ENST00000274938 LMOD3Q0VAK6 560 aa10.76□□□□□ -0.69
SCUBE3-201ENST00000274938 FANCIQ9NVI1 1328 aa10.76□□□□□ -0.69
SCUBE3-201ENST00000274938 GORABQ5T7V8 394 aa10.76□□□□□ -0.69
SCUBE3-201ENST00000274938 EIF3AQ14152 1382 aaKnown RBP10.76□□□□□ -0.69
SCUBE3-201ENST00000274938 NOM1Q5C9Z4 860 aaKnown RBP10.76□□□□□ -0.69
SCUBE3-201ENST00000274938 BECN2A8MW95 431 aa10.76□□□□□ -0.69
SCUBE3-201ENST00000274938 MTERF4Q7Z6M4 381 aaKnown RBP10.75□□□□□ -0.69
SCUBE3-201ENST00000274938 NLRP13Q86W25 1043 aa10.74□□□□□ -0.69
SCUBE3-201ENST00000274938 TPD52L1Q16890 204 aaPredicted RBP10.74□□□□□ -0.69
SCUBE3-201ENST00000274938 MAP7D2Q96T17 732 aa10.74□□□□□ -0.69
SCUBE3-201ENST00000274938 ACBD3Q9H3P7 528 aa10.74□□□□□ -0.69
SCUBE3-201ENST00000274938 PDE4AP27815 886 aa10.74□□□□□ -0.69
SCUBE3-201ENST00000274938 CDR1P51861 262 aa10.73□□□□□ -0.69
SCUBE3-201ENST00000274938 PRM3Q9NNZ6 103 aa10.73□□□□□ -0.69
SCUBE3-201ENST00000274938 ARGLU1Q9NWB6 273 aaPredicted RBP10.73□□□□□ -0.69
SCUBE3-201ENST00000274938 FOXD4L1Q9NU39 408 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms