RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

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Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 PLIN1O60240 522 aa17.11■□□□□ 0.33
HERC6-202ENST00000273960 PPM1GO15355 546 aaPredicted RBP17.09■□□□□ 0.33
HERC6-202ENST00000273960 NFKBIBQ15653 356 aa17.09■□□□□ 0.33
HERC6-202ENST00000273960 L3MBTL2Q969R5 705 aa17.09■□□□□ 0.33
HERC6-202ENST00000273960 LAMC3Q9Y6N6 1575 aa17.09■□□□□ 0.33
HERC6-202ENST00000273960 TMC1Q8TDI8 760 aa17.08■□□□□ 0.32
HERC6-202ENST00000273960 TIAM1Q13009 1591 aa17.07■□□□□ 0.32
HERC6-202ENST00000273960 PCF11O94913 1555 aaKnown RBP17.07■□□□□ 0.32
HERC6-202ENST00000273960 ZNF608Q9ULD9 1512 aaPredicted RBP17.06■□□□□ 0.32
HERC6-202ENST00000273960 CNTLNQ9NXG0 1405 aa17.03■□□□□ 0.32
HERC6-202ENST00000273960 PKNOX2Q96KN3 472 aa17.02■□□□□ 0.32
HERC6-202ENST00000273960 ARID4BQ4LE39 1312 aaPredicted RBP17.02■□□□□ 0.31
HERC6-202ENST00000273960 FRAT2O75474 233 aaPredicted RBP17.02■□□□□ 0.31
HERC6-202ENST00000273960 BACH2Q9BYV9 841 aa17.02■□□□□ 0.31
HERC6-202ENST00000273960 ZNF644Q9H582 1327 aaPredicted RBP17.01■□□□□ 0.31
HERC6-202ENST00000273960 USP35Q9P2H5 1018 aa17.01■□□□□ 0.31
HERC6-202ENST00000273960 CASKIN1Q8WXD9 1431 aa17.01■□□□□ 0.31
HERC6-202ENST00000273960 CCDC7Q96M83 1385 aa17.01■□□□□ 0.31
HERC6-202ENST00000273960 KIF7Q2M1P5 1343 aa17.01■□□□□ 0.31
HERC6-202ENST00000273960 WASHC2CQ9Y4E1 1318 aa17■□□□□ 0.31
HERC6-202ENST00000273960 CCDC18Q5T9S5 1454 aa17■□□□□ 0.31
HERC6-202ENST00000273960 KIF21AQ7Z4S6 1674 aa17■□□□□ 0.31
HERC6-202ENST00000273960 PRDM2Q13029 1718 aa17■□□□□ 0.31
HERC6-202ENST00000273960 TCERG1O14776 1098 aaKnown RBP17■□□□□ 0.31
HERC6-202ENST00000273960 VSIG10Q8N0Z9 540 aa16.99■□□□□ 0.31
HERC6-202ENST00000273960 NBPF8Q3BBV2 869 aa16.99■□□□□ 0.31
HERC6-202ENST00000273960 MRC2Q9UBG0 1479 aa16.97■□□□□ 0.31
HERC6-202ENST00000273960 CFDP1Q9UEE9 299 aaPredicted RBP16.97■□□□□ 0.31
HERC6-202ENST00000273960 DCAF11Q8TEB1 546 aa16.97■□□□□ 0.31
HERC6-202ENST00000273960 RRP1P56182 461 aaKnown RBP16.97■□□□□ 0.31
HERC6-202ENST00000273960 FGD6Q6ZV73 1430 aa16.96■□□□□ 0.31
HERC6-202ENST00000273960 RGS3P49796 1198 aa16.96■□□□□ 0.31
HERC6-202ENST00000273960 JPH4Q96JJ6 628 aa16.96■□□□□ 0.31
HERC6-202ENST00000273960 RCAN3Q9UKA8 241 aa16.95■□□□□ 0.3
HERC6-202ENST00000273960 SMG6Q86US8 1419 aaKnown RBP16.95■□□□□ 0.3
HERC6-202ENST00000273960 CDCA7LQ96GN5 454 aa16.94■□□□□ 0.3
HERC6-202ENST00000273960 FYCO1Q9BQS8 1478 aa16.94■□□□□ 0.3
HERC6-202ENST00000273960 SLC4A1APQ9BWU0 796 aaKnown RBP16.93■□□□□ 0.3
HERC6-202ENST00000273960 PTPRKQ15262 1439 aa16.93■□□□□ 0.3
HERC6-202ENST00000273960 NCOA2Q15596 1464 aa16.92■□□□□ 0.3
HERC6-202ENST00000273960 GRIN2BQ13224 1484 aa16.92■□□□□ 0.3
HERC6-202ENST00000273960 NAP1L5Q96NT1 182 aaPredicted RBP16.91■□□□□ 0.3
HERC6-202ENST00000273960 CDK13Q14004 1512 aaKnown RBP16.91■□□□□ 0.3
HERC6-202ENST00000273960 SNAPC4Q5SXM2 1469 aa16.9■□□□□ 0.3
HERC6-202ENST00000273960 PLEKHD1A6NEE1 506 aa16.9■□□□□ 0.3
HERC6-202ENST00000273960 DDRGK1Q96HY6 314 aa16.9■□□□□ 0.3
HERC6-202ENST00000273960 CRBNQ96SW2 442 aa16.89■□□□□ 0.29
HERC6-202ENST00000273960 MPHOSPH9Q99550 1183 aa16.89■□□□□ 0.29
HERC6-202ENST00000273960 CUL7Q14999 1698 aa16.89■□□□□ 0.29
HERC6-202ENST00000273960 UACAQ9BZF9 1416 aa16.88■□□□□ 0.29
HERC6-202ENST00000273960 EFCAB5A4FU69 1503 aa16.88■□□□□ 0.29
HERC6-202ENST00000273960 SLKQ9H2G2 1235 aaPredicted RBP16.88■□□□□ 0.29
HERC6-202ENST00000273960 RSPH6AQ9H0K4 717 aa16.87■□□□□ 0.29
HERC6-202ENST00000273960 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.87■□□□□ 0.29
HERC6-202ENST00000273960 MYOM3Q5VTT5 1437 aa16.86■□□□□ 0.29
HERC6-202ENST00000273960 POGKQ9P215 609 aa16.86■□□□□ 0.29
HERC6-202ENST00000273960 PNISRQ8TF01 805 aaKnown RBP16.86■□□□□ 0.29
HERC6-202ENST00000273960 SPRYD3Q8NCJ5 442 aa16.85■□□□□ 0.29
HERC6-202ENST00000273960 GZF1Q9H116 711 aaPredicted RBP16.84■□□□□ 0.29
HERC6-202ENST00000273960 C20orf194Q5TEA3 1177 aa16.84■□□□□ 0.29
HERC6-202ENST00000273960 KDM2AQ9Y2K7 1162 aa16.84■□□□□ 0.29
HERC6-202ENST00000273960 ZMYND15Q9H091 742 aa16.83■□□□□ 0.28
HERC6-202ENST00000273960 RNF123Q5XPI4 1314 aa16.82■□□□□ 0.28
HERC6-202ENST00000273960 RRAGDQ9NQL2 400 aaPredicted RBP16.82■□□□□ 0.28
HERC6-202ENST00000273960 IFT140Q96RY7 1462 aa16.82■□□□□ 0.28
HERC6-202ENST00000273960 NCOA1Q15788 1441 aa16.8■□□□□ 0.28
HERC6-202ENST00000273960 TSPY4P0CV99 314 aa16.8■□□□□ 0.28
HERC6-202ENST00000273960 TSPY10P0CW01 314 aa16.8■□□□□ 0.28
HERC6-202ENST00000273960 NAIPQ13075 1403 aa16.79■□□□□ 0.28
HERC6-202ENST00000273960 ABCA5Q8WWZ7 1642 aa16.79■□□□□ 0.28
HERC6-202ENST00000273960 HNRNPMP52272 730 aaKnown RBP eCLIP16.79■□□□□ 0.28
HERC6-202ENST00000273960 PRG4Q92954 1404 aaPredicted RBP16.79■□□□□ 0.28
HERC6-202ENST00000273960 IQGAP2Q13576 1575 aa16.78■□□□□ 0.28
HERC6-202ENST00000273960 GLIPR1L2Q4G1C9 344 aa16.78■□□□□ 0.28
HERC6-202ENST00000273960 FAM43AQ8N2R8 423 aa16.78■□□□□ 0.28
HERC6-202ENST00000273960 CTTNBP2Q8WZ74 1663 aa16.78■□□□□ 0.28
HERC6-202ENST00000273960 MS4A1P11836 297 aa16.78■□□□□ 0.28
HERC6-202ENST00000273960 EPRSP07814 1512 aaKnown RBP16.77■□□□□ 0.27
HERC6-202ENST00000273960 MAP3K1Q13233 1512 aa16.76■□□□□ 0.27
HERC6-202ENST00000273960 PLB1Q6P1J6 1458 aa16.76■□□□□ 0.27
HERC6-202ENST00000273960 CC2D1BQ5T0F9 858 aaKnown RBP16.75■□□□□ 0.27
HERC6-202ENST00000273960 HFM1A2PYH4 1435 aa16.75■□□□□ 0.27
HERC6-202ENST00000273960 TARBP1Q13395 1621 aaKnown RBP16.74■□□□□ 0.27
HERC6-202ENST00000273960 CARMIL2Q6F5E8 1435 aa16.74■□□□□ 0.27
HERC6-202ENST00000273960 RGL3Q3MIN7 710 aa16.73■□□□□ 0.27
HERC6-202ENST00000273960 KDM5BQ9UGL1 1544 aa16.73■□□□□ 0.27
HERC6-202ENST00000273960 HSP90AA2PQ14568 343 aaPredicted RBP16.72■□□□□ 0.27
HERC6-202ENST00000273960 GRIN2AQ12879 1464 aa16.72■□□□□ 0.27
HERC6-202ENST00000273960 PKD2Q13563 968 aa16.71■□□□□ 0.27
HERC6-202ENST00000273960 PNNQ9H307 717 aaKnown RBP16.71■□□□□ 0.26
HERC6-202ENST00000273960 THOC2Q8NI27 1593 aaKnown RBP16.7■□□□□ 0.26
HERC6-202ENST00000273960 KIAA0586Q9BVV6 1533 aa16.7■□□□□ 0.26
HERC6-202ENST00000273960 DHX29Q7Z478 1369 aaKnown RBP16.69■□□□□ 0.26
HERC6-202ENST00000273960 CARD11Q9BXL7 1154 aa16.69■□□□□ 0.26
HERC6-202ENST00000273960 PANK2Q9BZ23 570 aa16.69■□□□□ 0.26
HERC6-202ENST00000273960 MAGI3Q5TCQ9 1506 aa16.68■□□□□ 0.26
HERC6-202ENST00000273960 PTPN23Q9H3S7 1636 aa16.68■□□□□ 0.26
HERC6-202ENST00000273960 FAM161AQ3B820 660 aa16.68■□□□□ 0.26
HERC6-202ENST00000273960 CFAP43Q8NDM7 1665 aa16.68■□□□□ 0.26
HERC6-202ENST00000273960 ARID3AQ99856 593 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms