RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 EPRSP07814 1512 aaKnown RBP17.71■□□□□ 0.43
BEST3-201ENST00000266661 GCC2Q8IWJ2 1684 aa17.7■□□□□ 0.42
BEST3-201ENST00000266661 TONSLQ96HA7 1378 aa17.69■□□□□ 0.42
BEST3-201ENST00000266661 CCER2I3L3R5 266 aa17.69■□□□□ 0.42
BEST3-201ENST00000266661 ABCA8O94911 1581 aa17.68■□□□□ 0.42
BEST3-201ENST00000266661 MIA2Q96PC5 1412 aa17.68■□□□□ 0.42
BEST3-201ENST00000266661 ABCC2Q92887 1545 aa17.66■□□□□ 0.42
BEST3-201ENST00000266661 RAPGEF6Q8TEU7 1601 aa17.65■□□□□ 0.42
BEST3-201ENST00000266661 HIRIP3Q9BW71 556 aaPredicted RBP17.64■□□□□ 0.41
BEST3-201ENST00000266661 CDK13Q14004 1512 aaKnown RBP17.63■□□□□ 0.41
BEST3-201ENST00000266661 KDM6BO15054 1643 aa17.63■□□□□ 0.41
BEST3-201ENST00000266661 ZCCHC11Q5TAX3 1644 aaKnown RBP17.62■□□□□ 0.41
BEST3-201ENST00000266661 UHRF1BP1LA0JNW5 1464 aa17.6■□□□□ 0.41
BEST3-201ENST00000266661 NUP153P49790 1475 aaKnown RBP17.6■□□□□ 0.41
BEST3-201ENST00000266661 NPM1P06748 294 aaKnown RBP eCLIP17.6■□□□□ 0.41
BEST3-201ENST00000266661 RRP7BPQ9NSQ0 103 aa17.58■□□□□ 0.41
BEST3-201ENST00000266661 ATP10BO94823 1461 aa17.57■□□□□ 0.4
BEST3-201ENST00000266661 ANP32CO43423 234 aa17.56■□□□□ 0.4
BEST3-201ENST00000266661 ROCK1Q13464 1354 aa17.55■□□□□ 0.4
BEST3-201ENST00000266661 TRHP20396 242 aaPredicted RBP17.54■□□□□ 0.4
BEST3-201ENST00000266661 CHIC2Q9UKJ5 165 aa17.54■□□□□ 0.4
BEST3-201ENST00000266661 MPHOSPH9Q99550 1183 aa17.52■□□□□ 0.39
BEST3-201ENST00000266661 DAPK1P53355 1430 aa17.52■□□□□ 0.39
BEST3-201ENST00000266661 ASXL2Q76L83 1435 aa17.52■□□□□ 0.39
BEST3-201ENST00000266661 DNMT1P26358 1616 aaKnown RBP17.52■□□□□ 0.39
BEST3-201ENST00000266661 KIF13AQ9H1H9 1805 aa17.51■□□□□ 0.39
BEST3-201ENST00000266661 ABCC5O15440 1437 aa17.51■□□□□ 0.39
BEST3-201ENST00000266661 TSHZ2Q9NRE2 1034 aa17.5■□□□□ 0.39
BEST3-201ENST00000266661 MYT1Q01538 1121 aa17.49■□□□□ 0.39
BEST3-201ENST00000266661 ANKRD30BQ9BXX2 1392 aa17.49■□□□□ 0.39
BEST3-201ENST00000266661 WASHC2AQ641Q2 1341 aa17.48■□□□□ 0.39
BEST3-201ENST00000266661 HSPA5P11021 654 aaKnown RBP17.48■□□□□ 0.39
BEST3-201ENST00000266661 TSPOAP1O95153 1857 aa17.46■□□□□ 0.39
BEST3-201ENST00000266661 TRIM52Q96A61 297 aa17.46■□□□□ 0.38
BEST3-201ENST00000266661 RPRD2Q5VT52 1461 aaKnown RBP17.45■□□□□ 0.38
BEST3-201ENST00000266661 FAM69CQ0P6D2 419 aa17.45■□□□□ 0.38
BEST3-201ENST00000266661 L3MBTL2Q969R5 705 aa17.44■□□□□ 0.38
BEST3-201ENST00000266661 TEX14Q8IWB6 1497 aa17.43■□□□□ 0.38
BEST3-201ENST00000266661 DIP2BQ9P265 1576 aa17.43■□□□□ 0.38
BEST3-201ENST00000266661 WDR7Q9Y4E6 1490 aa17.43■□□□□ 0.38
BEST3-201ENST00000266661 FKBP8Q14318 412 aa17.42■□□□□ 0.38
BEST3-201ENST00000266661 ZNF644Q9H582 1327 aaPredicted RBP17.42■□□□□ 0.38
BEST3-201ENST00000266661 ABCC10Q5T3U5 1492 aa17.42■□□□□ 0.38
BEST3-201ENST00000266661 TROQ12816 1431 aaPredicted RBP17.41■□□□□ 0.38
BEST3-201ENST00000266661 NCOA1Q15788 1441 aa17.41■□□□□ 0.38
BEST3-201ENST00000266661 PLEKHD1A6NEE1 506 aa17.41■□□□□ 0.38
BEST3-201ENST00000266661 EIF4G2P78344 907 aaKnown RBP eCLIP17.41■□□□□ 0.38
BEST3-201ENST00000266661 SPATA31E1Q6ZUB1 1445 aa17.39■□□□□ 0.37
BEST3-201ENST00000266661 CNTLNQ9NXG0 1405 aa17.39■□□□□ 0.37
BEST3-201ENST00000266661 PZPP20742 1482 aa17.38■□□□□ 0.37
BEST3-201ENST00000266661 FOXD1Q16676 465 aa17.38■□□□□ 0.37
BEST3-201ENST00000266661 NBPF8Q3BBV2 869 aa17.38■□□□□ 0.37
BEST3-201ENST00000266661 KIF14Q15058 1648 aa17.38■□□□□ 0.37
BEST3-201ENST00000266661 C11orf95C9JLR9 678 aaPredicted RBP17.37■□□□□ 0.37
BEST3-201ENST00000266661 ADGRL2O95490 1459 aa17.37■□□□□ 0.37
BEST3-201ENST00000266661 GPATCH8Q9UKJ3 1502 aaKnown RBP17.37■□□□□ 0.37
BEST3-201ENST00000266661 CDK11AQ9UQ88 783 aaPredicted RBP17.37■□□□□ 0.37
BEST3-201ENST00000266661 CCDC7Q96M83 1385 aa17.36■□□□□ 0.37
BEST3-201ENST00000266661 CAMSAP2Q08AD1 1489 aa17.36■□□□□ 0.37
BEST3-201ENST00000266661 ITSN2Q9NZM3 1697 aa17.33■□□□□ 0.37
BEST3-201ENST00000266661 MBD5Q9P267 1494 aa17.33■□□□□ 0.36
BEST3-201ENST00000266661 BCANQ96GW7 911 aa17.33■□□□□ 0.36
BEST3-201ENST00000266661 TTC37Q6PGP7 1564 aa17.32■□□□□ 0.36
BEST3-201ENST00000266661 PPRC1Q5VV67 1664 aaKnown RBP17.32■□□□□ 0.36
BEST3-201ENST00000266661 ADGBQ8N7X0 1667 aa17.32■□□□□ 0.36
BEST3-201ENST00000266661 MAP3K4Q9Y6R4 1608 aa17.32■□□□□ 0.36
BEST3-201ENST00000266661 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.32■□□□□ 0.36
BEST3-201ENST00000266661 CROCC2H7BZ55 1655 aa17.31■□□□□ 0.36
BEST3-201ENST00000266661 GLI2P10070 1586 aa17.31■□□□□ 0.36
BEST3-201ENST00000266661 SLC4A1APQ9BWU0 796 aaKnown RBP17.3■□□□□ 0.36
BEST3-201ENST00000266661 POLR1AO95602 1720 aaPredicted RBP17.29■□□□□ 0.36
BEST3-201ENST00000266661 NEFLP07196 543 aa17.29■□□□□ 0.36
BEST3-201ENST00000266661 ABCA9Q8IUA7 1624 aa17.29■□□□□ 0.36
BEST3-201ENST00000266661 CCDC184Q52MB2 194 aa17.28■□□□□ 0.36
BEST3-201ENST00000266661 CFDP1Q9UEE9 299 aaPredicted RBP17.28■□□□□ 0.36
BEST3-201ENST00000266661 CD109Q6YHK3 1445 aa17.27■□□□□ 0.36
BEST3-201ENST00000266661 KIAA1107Q9UPP5 1409 aa17.27■□□□□ 0.36
BEST3-201ENST00000266661 PRKRIP1Q9H875 184 aaPredicted RBP17.27■□□□□ 0.36
BEST3-201ENST00000266661 HNRNPUQ00839 825 aaKnown RBP eCLIP17.26■□□□□ 0.35
BEST3-201ENST00000266661 KIF7Q2M1P5 1343 aa17.25■□□□□ 0.35
BEST3-201ENST00000266661 CDC42BPAQ5VT25 1732 aa17.23■□□□□ 0.35
BEST3-201ENST00000266661 MYO5CQ9NQX4 1742 aa17.23■□□□□ 0.35
BEST3-201ENST00000266661 CDC42BPBQ9Y5S2 1711 aa17.23■□□□□ 0.35
BEST3-201ENST00000266661 SHANK2Q9UPX8 1470 aa17.23■□□□□ 0.35
BEST3-201ENST00000266661 ANKRD30AQ9BXX3 1397 aa17.22■□□□□ 0.35
BEST3-201ENST00000266661 KDM5DQ9BY66 1539 aa17.2■□□□□ 0.34
BEST3-201ENST00000266661 UHRF1BP1Q6BDS2 1440 aa17.2■□□□□ 0.34
BEST3-201ENST00000266661 ANKRD50Q9ULJ7 1429 aa17.19■□□□□ 0.34
BEST3-201ENST00000266661 DHX29Q7Z478 1369 aaKnown RBP17.18■□□□□ 0.34
BEST3-201ENST00000266661 BCORL1Q5H9F3 1711 aa17.17■□□□□ 0.34
BEST3-201ENST00000266661 PKD2Q13563 968 aa17.16■□□□□ 0.34
BEST3-201ENST00000266661 ERICH6BQ5W0A0 696 aa17.16■□□□□ 0.34
BEST3-201ENST00000266661 ZNF777Q9ULD5 760 aaPredicted RBP17.16■□□□□ 0.34
BEST3-201ENST00000266661 KDM5CP41229 1560 aa17.16■□□□□ 0.34
BEST3-201ENST00000266661 COL17A1Q9UMD9 1497 aaPredicted RBP17.16■□□□□ 0.34
BEST3-201ENST00000266661 PLCH2O75038 1416 aa17.16■□□□□ 0.34
BEST3-201ENST00000266661 PREX2Q70Z35 1606 aa17.15■□□□□ 0.34
BEST3-201ENST00000266661 ARHGAP5Q13017 1502 aa17.15■□□□□ 0.34
BEST3-201ENST00000266661 C9orf84Q5VXU9 1444 aa17.15■□□□□ 0.34
BEST3-201ENST00000266661 ARID4BQ4LE39 1312 aaPredicted RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms