RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 MYOM3Q5VTT5 1437 aa26.38■■□□□ 1.81
CSPG5-201ENST00000264723 NCOA2Q15596 1464 aa26.38■■□□□ 1.81
CSPG5-201ENST00000264723 SLC24A1O60721 1099 aa26.37■■□□□ 1.81
CSPG5-201ENST00000264723 ANKRD30AQ9BXX3 1397 aa26.36■■□□□ 1.81
CSPG5-201ENST00000264723 NBPF8Q3BBV2 869 aa26.36■■□□□ 1.81
CSPG5-201ENST00000264723 GGT6Q6P531 493 aa26.33■■□□□ 1.81
CSPG5-201ENST00000264723 C11orf95C9JLR9 678 aaPredicted RBP26.33■■□□□ 1.81
CSPG5-201ENST00000264723 ST20-MTHFSA0A0A6YYL1 179 aa26.31■■□□□ 1.8
CSPG5-201ENST00000264723 KNSTRNQ9Y448 316 aa26.31■■□□□ 1.8
CSPG5-201ENST00000264723 TNNT2P45379 298 aaPredicted RBP26.3■■□□□ 1.8
CSPG5-201ENST00000264723 EFCAB2Q5VUJ9 269 aa26.3■■□□□ 1.8
CSPG5-201ENST00000264723 KIF7Q2M1P5 1343 aa26.3■■□□□ 1.8
CSPG5-201ENST00000264723 MAPKBP1O60336 1514 aa26.3■■□□□ 1.8
CSPG5-201ENST00000264723 NEFMP07197 916 aa26.29■■□□□ 1.8
CSPG5-201ENST00000264723 LAS1LQ9Y4W2 734 aaKnown RBP26.28■■□□□ 1.8
CSPG5-201ENST00000264723 PTPRGP23470 1445 aa26.27■■□□□ 1.8
CSPG5-201ENST00000264723 NOP58Q9Y2X3 529 aaKnown RBP26.26■■□□□ 1.79
CSPG5-201ENST00000264723 PCF11O94913 1555 aaKnown RBP26.26■■□□□ 1.79
CSPG5-201ENST00000264723 FYCO1Q9BQS8 1478 aa26.25■■□□□ 1.79
CSPG5-201ENST00000264723 CCDC7Q96M83 1385 aa26.24■■□□□ 1.79
CSPG5-201ENST00000264723 BIVM-ERCC5R4GMW8 1640 aa26.23■■□□□ 1.79
CSPG5-201ENST00000264723 NEUROD2Q15784 382 aa26.23■■□□□ 1.79
CSPG5-201ENST00000264723 NAIPQ13075 1403 aa26.22■■□□□ 1.79
CSPG5-201ENST00000264723 KIF3BO15066 747 aa26.22■■□□□ 1.79
CSPG5-201ENST00000264723 SAFB2Q14151 953 aaKnown RBP eCLIP26.2■■□□□ 1.79
CSPG5-201ENST00000264723 NUDCQ9Y266 331 aa26.2■■□□□ 1.78
CSPG5-201ENST00000264723 HFM1A2PYH4 1435 aa26.2■■□□□ 1.78
CSPG5-201ENST00000264723 PTPRKQ15262 1439 aa26.19■■□□□ 1.78
CSPG5-201ENST00000264723 MLECQ14165 292 aa26.19■■□□□ 1.78
CSPG5-201ENST00000264723 GRIN2BQ13224 1484 aa26.18■■□□□ 1.78
CSPG5-201ENST00000264723 ROCK2O75116 1388 aaKnown RBP26.16■■□□□ 1.78
CSPG5-201ENST00000264723 TMF1P82094 1093 aa26.15■■□□□ 1.78
CSPG5-201ENST00000264723 USP47Q96K76 1375 aa26.15■■□□□ 1.78
CSPG5-201ENST00000264723 ZBED9Q6R2W3 1325 aa26.15■■□□□ 1.78
CSPG5-201ENST00000264723 DNMBPQ6XZF7 1577 aa26.14■■□□□ 1.78
CSPG5-201ENST00000264723 PLEKHG5O94827 1062 aa26.13■■□□□ 1.77
CSPG5-201ENST00000264723 PLIN1O60240 522 aa26.13■■□□□ 1.77
CSPG5-201ENST00000264723 RGS3P49796 1198 aa26.12■■□□□ 1.77
CSPG5-201ENST00000264723 DEKP35659 375 aaKnown RBP26.12■■□□□ 1.77
CSPG5-201ENST00000264723 RCAN3Q9UKA8 241 aa26.12■■□□□ 1.77
CSPG5-201ENST00000264723 SPAG9O60271 1321 aaKnown RBP26.11■■□□□ 1.77
CSPG5-201ENST00000264723 PPM1GO15355 546 aaPredicted RBP26.11■■□□□ 1.77
CSPG5-201ENST00000264723 ABCA10Q8WWZ4 1543 aa26.1■■□□□ 1.77
CSPG5-201ENST00000264723 ARID4BQ4LE39 1312 aaPredicted RBP26.1■■□□□ 1.77
CSPG5-201ENST00000264723 CDCA8Q53HL2 280 aa26.1■■□□□ 1.77
CSPG5-201ENST00000264723 CNTLNQ9NXG0 1405 aa26.09■■□□□ 1.77
CSPG5-201ENST00000264723 NUTM2DQ5VT03 806 aaPredicted RBP26.09■■□□□ 1.77
CSPG5-201ENST00000264723 ERICH6BQ5W0A0 696 aa26.08■■□□□ 1.77
CSPG5-201ENST00000264723 PRDM2Q13029 1718 aa26.07■■□□□ 1.76
CSPG5-201ENST00000264723 EXOC6Q8TAG9 804 aa26.06■■□□□ 1.76
CSPG5-201ENST00000264723 RTN4Q9NQC3 1192 aaKnown RBP26.06■■□□□ 1.76
CSPG5-201ENST00000264723 ARXQ96QS3 562 aa26.05■■□□□ 1.76
CSPG5-201ENST00000264723 MRC2Q9UBG0 1479 aa26.05■■□□□ 1.76
CSPG5-201ENST00000264723 MSH5O43196 834 aa26.04■■□□□ 1.76
CSPG5-201ENST00000264723 PRG4Q92954 1404 aaPredicted RBP26.04■■□□□ 1.76
CSPG5-201ENST00000264723 STK26Q9P289 416 aa26.04■■□□□ 1.76
CSPG5-201ENST00000264723 URB2Q14146 1524 aaKnown RBP26.03■■□□□ 1.76
CSPG5-201ENST00000264723 CDK13Q14004 1512 aaKnown RBP26.03■■□□□ 1.76
CSPG5-201ENST00000264723 KANK1Q14678 1352 aa26.02■■□□□ 1.76
CSPG5-201ENST00000264723 RSPH4AQ5TD94 716 aa26.02■■□□□ 1.76
CSPG5-201ENST00000264723 POGKQ9P215 609 aa26■■□□□ 1.75
CSPG5-201ENST00000264723 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.99■■□□□ 1.75
CSPG5-201ENST00000264723 AKNAQ7Z591 1439 aa25.99■■□□□ 1.75
CSPG5-201ENST00000264723 KTN1Q86UP2 1357 aaKnown RBP25.99■■□□□ 1.75
CSPG5-201ENST00000264723 SNAPC4Q5SXM2 1469 aa25.99■■□□□ 1.75
CSPG5-201ENST00000264723 EFCAB5A4FU69 1503 aa25.98■■□□□ 1.75
CSPG5-201ENST00000264723 PANK3Q9H999 370 aa25.97■■□□□ 1.75
CSPG5-201ENST00000264723 MAP3K1Q13233 1512 aa25.96■■□□□ 1.75
CSPG5-201ENST00000264723 RALBP1Q15311 655 aa25.96■■□□□ 1.75
CSPG5-201ENST00000264723 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.96■■□□□ 1.75
CSPG5-201ENST00000264723 NLRP13Q86W25 1043 aa25.95■■□□□ 1.74
CSPG5-201ENST00000264723 KIF15Q9NS87 1388 aa25.95■■□□□ 1.74
CSPG5-201ENST00000264723 FRAT1Q92837 279 aaPredicted RBP25.94■■□□□ 1.74
CSPG5-201ENST00000264723 AFAP1Q8N556 730 aa25.94■■□□□ 1.74
CSPG5-201ENST00000264723 CCDC146Q8IYE0 955 aa25.93■■□□□ 1.74
CSPG5-201ENST00000264723 FANCIQ9NVI1 1328 aa25.93■■□□□ 1.74
CSPG5-201ENST00000264723 CDCA7LQ96GN5 454 aa25.93■■□□□ 1.74
CSPG5-201ENST00000264723 NBPF1Q3BBV0 1214 aa25.92■■□□□ 1.74
CSPG5-201ENST00000264723 CCDC144AA2RUR9 1427 aa25.91■■□□□ 1.74
CSPG5-201ENST00000264723 ANKRD50Q9ULJ7 1429 aa25.91■■□□□ 1.74
CSPG5-201ENST00000264723 IFT140Q96RY7 1462 aa25.9■■□□□ 1.74
CSPG5-201ENST00000264723 ZNF608Q9ULD9 1512 aaPredicted RBP25.9■■□□□ 1.74
CSPG5-201ENST00000264723 MYBBP1AQ9BQG0 1328 aaKnown RBP25.9■■□□□ 1.74
CSPG5-201ENST00000264723 SRPK2P78362 688 aaKnown RBP25.89■■□□□ 1.73
CSPG5-201ENST00000264723 IPO9Q96P70 1041 aaKnown RBP25.88■■□□□ 1.73
CSPG5-201ENST00000264723 U2SURPO15042 1029 aaKnown RBP25.88■■□□□ 1.73
CSPG5-201ENST00000264723 PAK3O75914 559 aaPredicted RBP25.88■■□□□ 1.73
CSPG5-201ENST00000264723 CYB5RLQ6IPT4 315 aa25.88■■□□□ 1.73
CSPG5-201ENST00000264723 CFAP53Q96M91 514 aa25.87■■□□□ 1.73
CSPG5-201ENST00000264723 RRP1P56182 461 aaKnown RBP25.86■■□□□ 1.73
CSPG5-201ENST00000264723 LAMC3Q9Y6N6 1575 aa25.86■■□□□ 1.73
CSPG5-201ENST00000264723 SLC4A3P48751 1232 aa25.85■■□□□ 1.73
CSPG5-201ENST00000264723 TRAK1Q9UPV9 953 aa25.85■■□□□ 1.73
CSPG5-201ENST00000264723 EPRSP07814 1512 aaKnown RBP25.85■■□□□ 1.73
CSPG5-201ENST00000264723 WASHC2CQ9Y4E1 1318 aa25.84■■□□□ 1.73
CSPG5-201ENST00000264723 C14orf37Q86TY3 774 aa25.83■■□□□ 1.73
CSPG5-201ENST00000264723 EHBP1L1Q8N3D4 1523 aa25.83■■□□□ 1.73
CSPG5-201ENST00000264723 PNISRQ8TF01 805 aaKnown RBP25.83■■□□□ 1.73
CSPG5-201ENST00000264723 ANKRD30BQ9BXX2 1392 aa25.83■■□□□ 1.73
CSPG5-201ENST00000264723 MORC1Q86VD1 984 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms