RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 DENND4BO75064 1496 aaPredicted RBP16.72■□□□□ 0.27
CHMP2B-201ENST00000263780 KIF7Q2M1P5 1343 aa16.7■□□□□ 0.26
CHMP2B-201ENST00000263780 RAD54L2Q9Y4B4 1467 aa16.7■□□□□ 0.26
CHMP2B-201ENST00000263780 MIA2Q96PC5 1412 aa16.69■□□□□ 0.26
CHMP2B-201ENST00000263780 POLA1P09884 1462 aaPredicted RBP16.69■□□□□ 0.26
CHMP2B-201ENST00000263780 CHIC2Q9UKJ5 165 aa16.69■□□□□ 0.26
CHMP2B-201ENST00000263780 SPATA31E1Q6ZUB1 1445 aa16.68■□□□□ 0.26
CHMP2B-201ENST00000263780 RPRD2Q5VT52 1461 aaKnown RBP16.68■□□□□ 0.26
CHMP2B-201ENST00000263780 POLR1AO95602 1720 aaPredicted RBP16.67■□□□□ 0.26
CHMP2B-201ENST00000263780 ANKRD30BQ9BXX2 1392 aa16.66■□□□□ 0.26
CHMP2B-201ENST00000263780 ARID4BQ4LE39 1312 aaPredicted RBP16.66■□□□□ 0.26
CHMP2B-201ENST00000263780 TOPBP1Q92547 1522 aa16.66■□□□□ 0.26
CHMP2B-201ENST00000263780 KIF21AQ7Z4S6 1674 aa16.65■□□□□ 0.26
CHMP2B-201ENST00000263780 LRRIQ1Q96JM4 1722 aa16.64■□□□□ 0.25
CHMP2B-201ENST00000263780 ROCK1Q13464 1354 aa16.64■□□□□ 0.25
CHMP2B-201ENST00000263780 NBPF8Q3BBV2 869 aa16.64■□□□□ 0.25
CHMP2B-201ENST00000263780 USP35Q9P2H5 1018 aa16.64■□□□□ 0.25
CHMP2B-201ENST00000263780 TEX14Q8IWB6 1497 aa16.62■□□□□ 0.25
CHMP2B-201ENST00000263780 TCERG1O14776 1098 aaKnown RBP16.61■□□□□ 0.25
CHMP2B-201ENST00000263780 DHX29Q7Z478 1369 aaKnown RBP16.6■□□□□ 0.25
CHMP2B-201ENST00000263780 KDM6BO15054 1643 aa16.59■□□□□ 0.25
CHMP2B-201ENST00000263780 ROCK2O75116 1388 aaKnown RBP16.59■□□□□ 0.25
CHMP2B-201ENST00000263780 MAGI3Q5TCQ9 1506 aa16.58■□□□□ 0.24
CHMP2B-201ENST00000263780 PRKCSHP14314 528 aaPredicted RBP16.56■□□□□ 0.24
CHMP2B-201ENST00000263780 FOXD1Q16676 465 aa16.56■□□□□ 0.24
CHMP2B-201ENST00000263780 TMC1Q8TDI8 760 aa16.56■□□□□ 0.24
CHMP2B-201ENST00000263780 MS4A1P11836 297 aa16.56■□□□□ 0.24
CHMP2B-201ENST00000263780 PNISRQ8TF01 805 aaKnown RBP16.56■□□□□ 0.24
CHMP2B-201ENST00000263780 SLC4A1APQ9BWU0 796 aaKnown RBP16.56■□□□□ 0.24
CHMP2B-201ENST00000263780 PPM1GO15355 546 aaPredicted RBP16.55■□□□□ 0.24
CHMP2B-201ENST00000263780 KTN1Q86UP2 1357 aaKnown RBP16.55■□□□□ 0.24
CHMP2B-201ENST00000263780 EPRSP07814 1512 aaKnown RBP16.52■□□□□ 0.24
CHMP2B-201ENST00000263780 GAPVD1Q14C86 1478 aa16.52■□□□□ 0.24
CHMP2B-201ENST00000263780 DAPK1P53355 1430 aa16.52■□□□□ 0.24
CHMP2B-201ENST00000263780 USP47Q96K76 1375 aa16.52■□□□□ 0.23
CHMP2B-201ENST00000263780 RRP1P56182 461 aaKnown RBP16.51■□□□□ 0.23
CHMP2B-201ENST00000263780 BRD4O60885 1362 aaPredicted RBP16.5■□□□□ 0.23
CHMP2B-201ENST00000263780 KIF15Q9NS87 1388 aa16.5■□□□□ 0.23
CHMP2B-201ENST00000263780 PDE3BQ13370 1112 aa16.49■□□□□ 0.23
CHMP2B-201ENST00000263780 NESP48681 1621 aa16.49■□□□□ 0.23
CHMP2B-201ENST00000263780 NEFMP07197 916 aa16.49■□□□□ 0.23
CHMP2B-201ENST00000263780 PDE4AP27815 886 aa16.49■□□□□ 0.23
CHMP2B-201ENST00000263780 RALBP1Q15311 655 aa16.49■□□□□ 0.23
CHMP2B-201ENST00000263780 LRPPRCP42704 1394 aaKnown RBP16.49■□□□□ 0.23
CHMP2B-201ENST00000263780 DDRGK1Q96HY6 314 aa16.48■□□□□ 0.23
CHMP2B-201ENST00000263780 MBD5Q9P267 1494 aa16.47■□□□□ 0.23
CHMP2B-201ENST00000263780 BACH2Q9BYV9 841 aa16.47■□□□□ 0.23
CHMP2B-201ENST00000263780 TDRD9Q8NDG6 1382 aaKnown RBP16.47■□□□□ 0.23
CHMP2B-201ENST00000263780 POLR3GLQ9BT43 218 aa16.47■□□□□ 0.23
CHMP2B-201ENST00000263780 ABCC5O15440 1437 aa16.47■□□□□ 0.23
CHMP2B-201ENST00000263780 RCAN3Q9UKA8 241 aa16.46■□□□□ 0.23
CHMP2B-201ENST00000263780 DNMT1P26358 1616 aaKnown RBP16.46■□□□□ 0.23
CHMP2B-201ENST00000263780 NPM2Q86SE8 214 aaKnown RBP16.46■□□□□ 0.23
CHMP2B-201ENST00000263780 MYBBP1AQ9BQG0 1328 aaKnown RBP16.46■□□□□ 0.23
CHMP2B-201ENST00000263780 WASHC2CQ9Y4E1 1318 aa16.45■□□□□ 0.22
CHMP2B-201ENST00000263780 ANO8Q9HCE9 1232 aaPredicted RBP16.44■□□□□ 0.22
CHMP2B-201ENST00000263780 EXOC6Q8TAG9 804 aa16.43■□□□□ 0.22
CHMP2B-201ENST00000263780 KIF14Q15058 1648 aa16.43■□□□□ 0.22
CHMP2B-201ENST00000263780 KIAA1107Q9UPP5 1409 aa16.43■□□□□ 0.22
CHMP2B-201ENST00000263780 LAMC3Q9Y6N6 1575 aa16.42■□□□□ 0.22
CHMP2B-201ENST00000263780 PZPP20742 1482 aa16.41■□□□□ 0.22
CHMP2B-201ENST00000263780 KDM5CP41229 1560 aa16.41■□□□□ 0.22
CHMP2B-201ENST00000263780 CNGB1Q14028 1251 aaPredicted RBP16.41■□□□□ 0.22
CHMP2B-201ENST00000263780 BCORL1Q5H9F3 1711 aa16.41■□□□□ 0.22
CHMP2B-201ENST00000263780 UHRF1BP1Q6BDS2 1440 aa16.41■□□□□ 0.22
CHMP2B-201ENST00000263780 WDR62O43379 1518 aa16.41■□□□□ 0.22
CHMP2B-201ENST00000263780 IL27Q8NEV9 243 aa16.41■□□□□ 0.22
CHMP2B-201ENST00000263780 CDK13Q14004 1512 aaKnown RBP16.41■□□□□ 0.22
CHMP2B-201ENST00000263780 URB2Q14146 1524 aaKnown RBP16.41■□□□□ 0.22
CHMP2B-201ENST00000263780 LAS1LQ9Y4W2 734 aaKnown RBP16.4■□□□□ 0.22
CHMP2B-201ENST00000263780 RALGAPBQ86X10 1494 aa16.39■□□□□ 0.21
CHMP2B-201ENST00000263780 IQGAP2Q13576 1575 aa16.39■□□□□ 0.21
CHMP2B-201ENST00000263780 ZNF326Q5BKZ1 582 aaKnown RBP16.38■□□□□ 0.21
CHMP2B-201ENST00000263780 SALL2Q9Y467 1007 aaPredicted RBP16.38■□□□□ 0.21
CHMP2B-201ENST00000263780 CARD11Q9BXL7 1154 aa16.37■□□□□ 0.21
CHMP2B-201ENST00000263780 NLRP13Q86W25 1043 aa16.36■□□□□ 0.21
CHMP2B-201ENST00000263780 INSRP06213 1382 aa16.36■□□□□ 0.21
CHMP2B-201ENST00000263780 ARHGEF12Q9NZN5 1544 aa16.34■□□□□ 0.21
CHMP2B-201ENST00000263780 PKD2Q13563 968 aa16.34■□□□□ 0.21
CHMP2B-201ENST00000263780 GSE1Q14687 1217 aa16.33■□□□□ 0.21
CHMP2B-201ENST00000263780 DAXXQ9UER7 740 aaPredicted RBP16.33■□□□□ 0.21
CHMP2B-201ENST00000263780 ADGRL2O95490 1459 aa16.32■□□□□ 0.2
CHMP2B-201ENST00000263780 ZNF644Q9H582 1327 aaPredicted RBP16.31■□□□□ 0.2
CHMP2B-201ENST00000263780 ZMYM4Q5VZL5 1548 aa16.31■□□□□ 0.2
CHMP2B-201ENST00000263780 ANKRD30AQ9BXX3 1397 aa16.31■□□□□ 0.2
CHMP2B-201ENST00000263780 PDS5BQ9NTI5 1447 aa16.3■□□□□ 0.2
CHMP2B-201ENST00000263780 RTN4Q9NQC3 1192 aaKnown RBP16.3■□□□□ 0.2
CHMP2B-201ENST00000263780 ADGBQ8N7X0 1667 aa16.29■□□□□ 0.2
CHMP2B-201ENST00000263780 PARD3Q8TEW0 1356 aa16.29■□□□□ 0.2
CHMP2B-201ENST00000263780 ST20-MTHFSA0A0A6YYL1 179 aa16.29■□□□□ 0.2
CHMP2B-201ENST00000263780 CFDP1Q9UEE9 299 aaPredicted RBP16.29■□□□□ 0.2
CHMP2B-201ENST00000263780 SENP3-EIF4A1A0A087X0R7 540 aa16.28■□□□□ 0.2
CHMP2B-201ENST00000263780 ARID3CA6NKF2 412 aa16.27■□□□□ 0.2
CHMP2B-201ENST00000263780 CAMSAP2Q08AD1 1489 aa16.27■□□□□ 0.19
CHMP2B-201ENST00000263780 PLEKHH2Q8IVE3 1493 aa16.27■□□□□ 0.19
CHMP2B-201ENST00000263780 NFKBIBQ15653 356 aa16.26■□□□□ 0.19
CHMP2B-201ENST00000263780 E9PCH4 1651 aa16.25■□□□□ 0.19
CHMP2B-201ENST00000263780 TROQ12816 1431 aaPredicted RBP16.24■□□□□ 0.19
CHMP2B-201ENST00000263780 ANKRD50Q9ULJ7 1429 aa16.24■□□□□ 0.19
CHMP2B-201ENST00000263780 CENPQQ7L2Z9 268 aaPredicted RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms