RNA–Protein interactions for RNA: ENST00000262965.9

TCF3-201, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-201ENST00000262965 TMF1P82094 1093 aa17.49■□□□□ 0.39
TCF3-201ENST00000262965 L3MBTL2Q969R5 705 aa17.49■□□□□ 0.39
TCF3-201ENST00000262965 HSP90AB1P08238 724 aaKnown RBP17.48■□□□□ 0.39
TCF3-201ENST00000262965 MPHOSPH9Q99550 1183 aa17.47■□□□□ 0.39
TCF3-201ENST00000262965 GZF1Q9H116 711 aaPredicted RBP17.45■□□□□ 0.38
TCF3-201ENST00000262965 DHX57Q6P158 1386 aaKnown RBP17.45■□□□□ 0.38
TCF3-201ENST00000262965 NUDCQ9Y266 331 aa17.44■□□□□ 0.38
TCF3-201ENST00000262965 SAFB2Q14151 953 aaKnown RBP eCLIP17.43■□□□□ 0.38
TCF3-201ENST00000262965 HMGXB3Q12766 1538 aa17.43■□□□□ 0.38
TCF3-201ENST00000262965 IPO9Q96P70 1041 aaKnown RBP17.43■□□□□ 0.38
TCF3-201ENST00000262965 FGD5Q6ZNL6 1462 aa17.42■□□□□ 0.38
TCF3-201ENST00000262965 ARHGAP35Q9NRY4 1499 aa17.42■□□□□ 0.38
TCF3-201ENST00000262965 CFTRP13569 1480 aa17.42■□□□□ 0.38
TCF3-201ENST00000262965 FMN1Q68DA7 1419 aa17.42■□□□□ 0.38
TCF3-201ENST00000262965 A0A0G2JS52 829 aa17.41■□□□□ 0.38
TCF3-201ENST00000262965 TCERG1O14776 1098 aaKnown RBP17.4■□□□□ 0.38
TCF3-201ENST00000262965 CARMIL2Q6F5E8 1435 aa17.4■□□□□ 0.38
TCF3-201ENST00000262965 POGKQ9P215 609 aa17.39■□□□□ 0.38
TCF3-201ENST00000262965 CC2D2AQ9P2K1 1620 aa17.39■□□□□ 0.37
TCF3-201ENST00000262965 TAOK2Q9UL54 1235 aa17.39■□□□□ 0.37
TCF3-201ENST00000262965 HSCBQ8IWL3 235 aa17.39■□□□□ 0.37
TCF3-201ENST00000262965 CASC1Q6TDU7 716 aa17.38■□□□□ 0.37
TCF3-201ENST00000262965 KTN1Q86UP2 1357 aaKnown RBP17.37■□□□□ 0.37
TCF3-201ENST00000262965 IGF1RP08069 1367 aa17.37■□□□□ 0.37
TCF3-201ENST00000262965 APBB1O00213 710 aa17.36■□□□□ 0.37
TCF3-201ENST00000262965 MORC1Q86VD1 984 aa17.36■□□□□ 0.37
TCF3-201ENST00000262965 SOX12O15370 315 aa17.36■□□□□ 0.37
TCF3-201ENST00000262965 SLC4A3P48751 1232 aa17.36■□□□□ 0.37
TCF3-201ENST00000262965 CLUAP1Q96AJ1 413 aa17.35■□□□□ 0.37
TCF3-201ENST00000262965 RAD54L2Q9Y4B4 1467 aa17.34■□□□□ 0.37
TCF3-201ENST00000262965 FHOD3Q2V2M9 1422 aa17.33■□□□□ 0.37
TCF3-201ENST00000262965 PLIN1O60240 522 aa17.32■□□□□ 0.36
TCF3-201ENST00000262965 CCDC146Q8IYE0 955 aa17.31■□□□□ 0.36
TCF3-201ENST00000262965 NUP155O75694 1391 aa17.31■□□□□ 0.36
TCF3-201ENST00000262965 L1TD1Q5T7N2 865 aaKnown RBP17.31■□□□□ 0.36
TCF3-201ENST00000262965 MS4A1P11836 297 aa17.3■□□□□ 0.36
TCF3-201ENST00000262965 PRKRIP1Q9H875 184 aaPredicted RBP17.3■□□□□ 0.36
TCF3-201ENST00000262965 ARID3AQ99856 593 aa17.3■□□□□ 0.36
TCF3-201ENST00000262965 GAPVD1Q14C86 1478 aa17.3■□□□□ 0.36
TCF3-201ENST00000262965 SRPK2P78362 688 aaKnown RBP17.3■□□□□ 0.36
TCF3-201ENST00000262965 RALBP1Q15311 655 aa17.3■□□□□ 0.36
TCF3-201ENST00000262965 ROCK2O75116 1388 aaKnown RBP17.29■□□□□ 0.36
TCF3-201ENST00000262965 U2AF1L5P0DN76 240 aaPredicted RBP17.29■□□□□ 0.36
TCF3-201ENST00000262965 U2AF1Q01081 240 aaKnown RBP eCLIP17.29■□□□□ 0.36
TCF3-201ENST00000262965 ZRSR1Q15695 479 aaKnown RBP17.28■□□□□ 0.36
TCF3-201ENST00000262965 EXOC6Q8TAG9 804 aa17.28■□□□□ 0.36
TCF3-201ENST00000262965 JPH4Q96JJ6 628 aa17.28■□□□□ 0.36
TCF3-201ENST00000262965 NESP48681 1621 aa17.28■□□□□ 0.36
TCF3-201ENST00000262965 SYNJ1O43426 1573 aa17.27■□□□□ 0.36
TCF3-201ENST00000262965 NLRP13Q86W25 1043 aa17.27■□□□□ 0.36
TCF3-201ENST00000262965 STK26Q9P289 416 aa17.26■□□□□ 0.35
TCF3-201ENST00000262965 MFAP1P55081 439 aaKnown RBP17.26■□□□□ 0.35
TCF3-201ENST00000262965 ST20-MTHFSA0A0A6YYL1 179 aa17.25■□□□□ 0.35
TCF3-201ENST00000262965 UNC13AQ9UPW8 1703 aa17.25■□□□□ 0.35
TCF3-201ENST00000262965 MSNP26038 577 aaKnown RBP17.25■□□□□ 0.35
TCF3-201ENST00000262965 LMOD2Q6P5Q4 547 aa17.25■□□□□ 0.35
TCF3-201ENST00000262965 PNNQ9H307 717 aaKnown RBP17.25■□□□□ 0.35
TCF3-201ENST00000262965 PDE4AP27815 886 aa17.25■□□□□ 0.35
TCF3-201ENST00000262965 ITPRIPQ8IWB1 547 aa17.25■□□□□ 0.35
TCF3-201ENST00000262965 KCNJ4P48050 445 aa17.24■□□□□ 0.35
TCF3-201ENST00000262965 OS9Q13438 667 aaPredicted RBP17.24■□□□□ 0.35
TCF3-201ENST00000262965 GOLGA2Q08379 1002 aa17.24■□□□□ 0.35
TCF3-201ENST00000262965 FGD1P98174 961 aa17.22■□□□□ 0.35
TCF3-201ENST00000262965 FOXD4L1Q9NU39 408 aa17.22■□□□□ 0.35
TCF3-201ENST00000262965 GGT6Q6P531 493 aa17.22■□□□□ 0.35
TCF3-201ENST00000262965 CHMP4BQ9H444 224 aaKnown RBP17.21■□□□□ 0.35
TCF3-201ENST00000262965 NAP1L2Q9ULW6 460 aaPredicted RBP17.21■□□□□ 0.35
TCF3-201ENST00000262965 RWDD1Q9H446 243 aaPredicted RBP17.2■□□□□ 0.34
TCF3-201ENST00000262965 BCL2L13Q9BXK5 485 aa17.2■□□□□ 0.34
TCF3-201ENST00000262965 PEG3Q9GZU2 1588 aa17.2■□□□□ 0.34
TCF3-201ENST00000262965 RRP7AQ9Y3A4 280 aaKnown RBP17.19■□□□□ 0.34
TCF3-201ENST00000262965 TOP2BQ02880 1626 aa17.18■□□□□ 0.34
TCF3-201ENST00000262965 ZBED9Q6R2W3 1325 aa17.17■□□□□ 0.34
TCF3-201ENST00000262965 AQRO60306 1485 aaKnown RBP eCLIP17.17■□□□□ 0.342e-6■■■■■ 29.3
TCF3-201ENST00000262965 GOLGA6L4A6NEF3 574 aa17.17■□□□□ 0.34
TCF3-201ENST00000262965 HNRNPMP52272 730 aaKnown RBP eCLIP17.17■□□□□ 0.349e-9■■■■■ 30
TCF3-201ENST00000262965 CUX1P39880 1505 aa17.16■□□□□ 0.34
TCF3-201ENST00000262965 SMC4Q9NTJ3 1288 aa17.16■□□□□ 0.34
TCF3-201ENST00000262965 FANCIQ9NVI1 1328 aa17.16■□□□□ 0.34
TCF3-201ENST00000262965 PDE3BQ13370 1112 aa17.15■□□□□ 0.34
TCF3-201ENST00000262965 GBP4Q96PP9 640 aa17.15■□□□□ 0.34
TCF3-201ENST00000262965 CRBNQ96SW2 442 aa17.15■□□□□ 0.34
TCF3-201ENST00000262965 GOLGA6L3A6NEY3 463 aa17.15■□□□□ 0.34
TCF3-201ENST00000262965 RRP1P56182 461 aaKnown RBP17.15■□□□□ 0.34
TCF3-201ENST00000262965 MLECQ14165 292 aa17.14■□□□□ 0.33
TCF3-201ENST00000262965 IPO8O15397 1037 aaKnown RBP17.14■□□□□ 0.33
TCF3-201ENST00000262965 PANK3Q9H999 370 aa17.14■□□□□ 0.33
TCF3-201ENST00000262965 TOPBP1Q92547 1522 aa17.14■□□□□ 0.33
TCF3-201ENST00000262965 CENPJQ9HC77 1338 aaPredicted RBP17.13■□□□□ 0.33
TCF3-201ENST00000262965 KIF21BO75037 1637 aa17.12■□□□□ 0.33
TCF3-201ENST00000262965 ANKRD30AQ9BXX3 1397 aa17.12■□□□□ 0.33
TCF3-201ENST00000262965 MYBBP1AQ9BQG0 1328 aaKnown RBP17.11■□□□□ 0.33
TCF3-201ENST00000262965 NUTM2DQ5VT03 806 aaPredicted RBP17.11■□□□□ 0.33
TCF3-201ENST00000262965 AMER1Q5JTC6 1135 aaPredicted RBP17.11■□□□□ 0.33
TCF3-201ENST00000262965 MRC2Q9UBG0 1479 aa17.1■□□□□ 0.33
TCF3-201ENST00000262965 PMFBP1Q8TBY8 1022 aa17.1■□□□□ 0.33
TCF3-201ENST00000262965 CCDC18Q5T9S5 1454 aa17.1■□□□□ 0.33
TCF3-201ENST00000262965 ERICH3Q5RHP9 1530 aa17.1■□□□□ 0.33
TCF3-201ENST00000262965 POLA1P09884 1462 aaPredicted RBP17.1■□□□□ 0.33
TCF3-201ENST00000262965 GSE1Q14687 1217 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms