RNA–Protein interactions for RNA: ENST00000262768.11

TIMP2-201, Transcript of TIMP metallopeptidase inhibitor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP2, Length 3,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP2-201ENST00000262768 KIAA0586Q9BVV6 1533 aa20.79■□□□□ 0.92
TIMP2-201ENST00000262768 UACAQ9BZF9 1416 aa20.79■□□□□ 0.92
TIMP2-201ENST00000262768 ANKRD30AQ9BXX3 1397 aa20.76■□□□□ 0.91
TIMP2-201ENST00000262768 THOC2Q8NI27 1593 aaKnown RBP20.75■□□□□ 0.91
TIMP2-201ENST00000262768 HFM1A2PYH4 1435 aa20.74■□□□□ 0.91
TIMP2-201ENST00000262768 NBPF8Q3BBV2 869 aa20.73■□□□□ 0.91
TIMP2-201ENST00000262768 TMC1Q8TDI8 760 aa20.71■□□□□ 0.91
TIMP2-201ENST00000262768 SUPT16HQ9Y5B9 1047 aaKnown RBP20.71■□□□□ 0.91
TIMP2-201ENST00000262768 MAPKBP1O60336 1514 aa20.71■□□□□ 0.91
TIMP2-201ENST00000262768 EHBP1L1Q8N3D4 1523 aa20.7■□□□□ 0.91
TIMP2-201ENST00000262768 MAP3K1Q13233 1512 aa20.7■□□□□ 0.9
TIMP2-201ENST00000262768 AFAP1Q8N556 730 aa20.69■□□□□ 0.9
TIMP2-201ENST00000262768 CTTNBP2Q8WZ74 1663 aa20.69■□□□□ 0.9
TIMP2-201ENST00000262768 ABCA5Q8WWZ7 1642 aa20.69■□□□□ 0.9
TIMP2-201ENST00000262768 GGT6Q6P531 493 aa20.67■□□□□ 0.9
TIMP2-201ENST00000262768 SYNJ2O15056 1496 aa20.67■□□□□ 0.9
TIMP2-201ENST00000262768 SUPT6HQ7KZ85 1726 aaKnown RBP20.67■□□□□ 0.9
TIMP2-201ENST00000262768 EFCAB2Q5VUJ9 269 aa20.66■□□□□ 0.9
TIMP2-201ENST00000262768 HECW1Q76N89 1606 aa20.66■□□□□ 0.9
TIMP2-201ENST00000262768 TROQ12816 1431 aaPredicted RBP20.65■□□□□ 0.9
TIMP2-201ENST00000262768 TARBP1Q13395 1621 aaKnown RBP20.65■□□□□ 0.9
TIMP2-201ENST00000262768 ARHGEF11O15085 1522 aa20.65■□□□□ 0.9
TIMP2-201ENST00000262768 KIF3BO15066 747 aa20.64■□□□□ 0.89
TIMP2-201ENST00000262768 PTPN23Q9H3S7 1636 aa20.64■□□□□ 0.89
TIMP2-201ENST00000262768 WASHC2AQ641Q2 1341 aa20.64■□□□□ 0.89
TIMP2-201ENST00000262768 MAGI3Q5TCQ9 1506 aa20.63■□□□□ 0.89
TIMP2-201ENST00000262768 ST20-MTHFSA0A0A6YYL1 179 aa20.63■□□□□ 0.89
TIMP2-201ENST00000262768 DAPK1P53355 1430 aa20.63■□□□□ 0.89
TIMP2-201ENST00000262768 CC2D1BQ5T0F9 858 aaKnown RBP20.62■□□□□ 0.89
TIMP2-201ENST00000262768 C11orf95C9JLR9 678 aaPredicted RBP20.62■□□□□ 0.89
TIMP2-201ENST00000262768 NUP153P49790 1475 aaKnown RBP20.62■□□□□ 0.89
TIMP2-201ENST00000262768 KIF15Q9NS87 1388 aa20.62■□□□□ 0.89
TIMP2-201ENST00000262768 ADAMTS12P58397 1594 aa20.61■□□□□ 0.89
TIMP2-201ENST00000262768 NUTM2DQ5VT03 806 aaPredicted RBP20.61■□□□□ 0.89
TIMP2-201ENST00000262768 ABCC5O15440 1437 aa20.61■□□□□ 0.89
TIMP2-201ENST00000262768 ANKRD50Q9ULJ7 1429 aa20.61■□□□□ 0.89
TIMP2-201ENST00000262768 EIF4G3O43432 1585 aaKnown RBP20.59■□□□□ 0.89
TIMP2-201ENST00000262768 CCDC184Q52MB2 194 aa20.59■□□□□ 0.89
TIMP2-201ENST00000262768 CYB5RLQ6IPT4 315 aa20.58■□□□□ 0.88
TIMP2-201ENST00000262768 SPAG9O60271 1321 aaKnown RBP20.57■□□□□ 0.88
TIMP2-201ENST00000262768 MAGI1Q96QZ7 1491 aaPredicted RBP20.56■□□□□ 0.88
TIMP2-201ENST00000262768 DISP1Q96F81 1524 aa20.56■□□□□ 0.88
TIMP2-201ENST00000262768 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.56■□□□□ 0.88
TIMP2-201ENST00000262768 MIA2Q96PC5 1412 aa20.56■□□□□ 0.88
TIMP2-201ENST00000262768 PBRM1Q86U86 1689 aa20.53■□□□□ 0.88
TIMP2-201ENST00000262768 MLECQ14165 292 aa20.53■□□□□ 0.88
TIMP2-201ENST00000262768 CFAP43Q8NDM7 1665 aa20.52■□□□□ 0.88
TIMP2-201ENST00000262768 ROCK2O75116 1388 aaKnown RBP20.52■□□□□ 0.88
TIMP2-201ENST00000262768 UGGT2Q9NYU1 1516 aa20.52■□□□□ 0.87
TIMP2-201ENST00000262768 SAFB2Q14151 953 aaKnown RBP eCLIP20.51■□□□□ 0.87
TIMP2-201ENST00000262768 STAG3Q9UJ98 1225 aa20.5■□□□□ 0.87
TIMP2-201ENST00000262768 NBPF1Q3BBV0 1214 aa20.5■□□□□ 0.87
TIMP2-201ENST00000262768 KIF7Q2M1P5 1343 aa20.5■□□□□ 0.87
TIMP2-201ENST00000262768 CCER2I3L3R5 266 aa20.5■□□□□ 0.87
TIMP2-201ENST00000262768 TNNT2P45379 298 aaPredicted RBP20.49■□□□□ 0.87
TIMP2-201ENST00000262768 WDR62O43379 1518 aa20.49■□□□□ 0.87
TIMP2-201ENST00000262768 C9orf84Q5VXU9 1444 aa20.49■□□□□ 0.87
TIMP2-201ENST00000262768 OSCARQ8IYS5 282 aa20.48■□□□□ 0.87
TIMP2-201ENST00000262768 CAMSAP2Q08AD1 1489 aa20.48■□□□□ 0.87
TIMP2-201ENST00000262768 USP47Q96K76 1375 aa20.47■□□□□ 0.87
TIMP2-201ENST00000262768 SAMD9Q5K651 1589 aa20.47■□□□□ 0.87
TIMP2-201ENST00000262768 ATP10BO94823 1461 aa20.47■□□□□ 0.87
TIMP2-201ENST00000262768 PRKRIP1Q9H875 184 aaPredicted RBP20.47■□□□□ 0.87
TIMP2-201ENST00000262768 GPATCH8Q9UKJ3 1502 aaKnown RBP20.46■□□□□ 0.87
TIMP2-201ENST00000262768 KIAA0556O60303 1618 aa20.45■□□□□ 0.86
TIMP2-201ENST00000262768 ARHGAP5Q13017 1502 aa20.45■□□□□ 0.86
TIMP2-201ENST00000262768 NCOA1Q15788 1441 aa20.45■□□□□ 0.86
TIMP2-201ENST00000262768 ANKRD30BQ9BXX2 1392 aa20.43■□□□□ 0.86
TIMP2-201ENST00000262768 ERICH6Q7L0X2 663 aa20.43■□□□□ 0.86
TIMP2-201ENST00000262768 CCDC144AA2RUR9 1427 aa20.42■□□□□ 0.86
TIMP2-201ENST00000262768 RAPGEF6Q8TEU7 1601 aa20.42■□□□□ 0.86
TIMP2-201ENST00000262768 RSPH4AQ5TD94 716 aa20.4■□□□□ 0.86
TIMP2-201ENST00000262768 CEP170Q5SW79 1584 aa20.4■□□□□ 0.86
TIMP2-201ENST00000262768 CCDC7Q96M83 1385 aa20.4■□□□□ 0.86
TIMP2-201ENST00000262768 B4GALNT3Q6L9W6 998 aa20.38■□□□□ 0.85
TIMP2-201ENST00000262768 AKNAQ7Z591 1439 aa20.36■□□□□ 0.85
TIMP2-201ENST00000262768 STK26Q9P289 416 aa20.36■□□□□ 0.85
TIMP2-201ENST00000262768 KDM6BO15054 1643 aa20.35■□□□□ 0.85
TIMP2-201ENST00000262768 KIAA1107Q9UPP5 1409 aa20.34■□□□□ 0.85
TIMP2-201ENST00000262768 KNSTRNQ9Y448 316 aa20.34■□□□□ 0.85
TIMP2-201ENST00000262768 RAPGEF3O95398 923 aa20.33■□□□□ 0.85
TIMP2-201ENST00000262768 ESF1Q9H501 851 aaKnown RBP20.33■□□□□ 0.85
TIMP2-201ENST00000262768 ROCK1Q13464 1354 aa20.32■□□□□ 0.84
TIMP2-201ENST00000262768 NEUROD2Q15784 382 aa20.32■□□□□ 0.84
TIMP2-201ENST00000262768 TMF1P82094 1093 aa20.32■□□□□ 0.84
TIMP2-201ENST00000262768 SCAPERQ9BY12 1400 aa20.31■□□□□ 0.84
TIMP2-201ENST00000262768 KIF14Q15058 1648 aa20.31■□□□□ 0.84
TIMP2-201ENST00000262768 NUP160Q12769 1436 aa20.3■□□□□ 0.84
TIMP2-201ENST00000262768 BCL11AQ9H165 835 aa20.3■□□□□ 0.84
TIMP2-201ENST00000262768 PANK3Q9H999 370 aa20.3■□□□□ 0.84
TIMP2-201ENST00000262768 TRAK1Q9UPV9 953 aa20.3■□□□□ 0.84
TIMP2-201ENST00000262768 WASHC2CQ9Y4E1 1318 aa20.29■□□□□ 0.84
TIMP2-201ENST00000262768 WDR43Q15061 677 aaKnown RBP eCLIP20.29■□□□□ 0.84
TIMP2-201ENST00000262768 ARID4BQ4LE39 1312 aaPredicted RBP20.29■□□□□ 0.84
TIMP2-201ENST00000262768 KANK1Q14678 1352 aa20.28■□□□□ 0.84
TIMP2-201ENST00000262768 CCDC136Q96JN2 1154 aa20.26■□□□□ 0.83
TIMP2-201ENST00000262768 PLEKHH2Q8IVE3 1493 aa20.24■□□□□ 0.83
TIMP2-201ENST00000262768 TCOF1Q13428 1488 aaKnown RBP20.24■□□□□ 0.83
TIMP2-201ENST00000262768 PLEKHG5O94827 1062 aa20.24■□□□□ 0.83
TIMP2-201ENST00000262768 TMEM132EQ6IEE7 984 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms