RNA–Protein interactions for RNA: ENST00000262305.8

RAB11FIP3-201, Transcript of RAB11 family interacting protein 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RAB11FIP3, Length 4,831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-201ENST00000262305 LAS1LQ9Y4W2 734 aaKnown RBP28.43■■■□□ 2.14
RAB11FIP3-201ENST00000262305 MORC1Q86VD1 984 aa28.41■■■□□ 2.14
RAB11FIP3-201ENST00000262305 FRAT1Q92837 279 aaPredicted RBP28.41■■■□□ 2.14
RAB11FIP3-201ENST00000262305 KIF3BO15066 747 aa28.39■■■□□ 2.14
RAB11FIP3-201ENST00000262305 MS4A1P11836 297 aa28.38■■■□□ 2.13
RAB11FIP3-201ENST00000262305 SPAG9O60271 1321 aaKnown RBP28.38■■■□□ 2.13
RAB11FIP3-201ENST00000262305 A0A0G2JS52 829 aa28.37■■■□□ 2.13
RAB11FIP3-201ENST00000262305 GAPVD1Q14C86 1478 aa28.36■■■□□ 2.13
RAB11FIP3-201ENST00000262305 SAFB2Q14151 953 aaKnown RBP eCLIP28.36■■■□□ 2.13
RAB11FIP3-201ENST00000262305 RALBP1Q15311 655 aa28.36■■■□□ 2.13
RAB11FIP3-201ENST00000262305 HAP1P54257 671 aaPredicted RBP28.35■■■□□ 2.13
RAB11FIP3-201ENST00000262305 B4GALNT3Q6L9W6 998 aa28.34■■■□□ 2.13
RAB11FIP3-201ENST00000262305 CHMP4BQ9H444 224 aaKnown RBP28.34■■■□□ 2.13
RAB11FIP3-201ENST00000262305 LMOD2Q6P5Q4 547 aa28.31■■■□□ 2.12
RAB11FIP3-201ENST00000262305 RAD54L2Q9Y4B4 1467 aa28.3■■■□□ 2.12
RAB11FIP3-201ENST00000262305 STK26Q9P289 416 aa28.3■■■□□ 2.12
RAB11FIP3-201ENST00000262305 PTPRGP23470 1445 aa28.3■■■□□ 2.12
RAB11FIP3-201ENST00000262305 RGS3P49796 1198 aa28.29■■■□□ 2.12
RAB11FIP3-201ENST00000262305 EIF5BO60841 1220 aaKnown RBP28.27■■■□□ 2.12
RAB11FIP3-201ENST00000262305 TRHP20396 242 aaPredicted RBP28.26■■■□□ 2.11
RAB11FIP3-201ENST00000262305 HDGFL2Q7Z4V5 671 aaPredicted RBP28.25■■■□□ 2.11
RAB11FIP3-201ENST00000262305 EIF3AQ14152 1382 aaKnown RBP28.24■■■□□ 2.11
RAB11FIP3-201ENST00000262305 ARXQ96QS3 562 aa28.22■■■□□ 2.11
RAB11FIP3-201ENST00000262305 CASC1Q6TDU7 716 aa28.21■■■□□ 2.11
RAB11FIP3-201ENST00000262305 ERICH6BQ5W0A0 696 aa28.2■■■□□ 2.11
RAB11FIP3-201ENST00000262305 ANP32EQ9BTT0 268 aa28.17■■■□□ 2.1
RAB11FIP3-201ENST00000262305 KIF21BO75037 1637 aa28.17■■■□□ 2.1
RAB11FIP3-201ENST00000262305 WASHC2CQ9Y4E1 1318 aa28.16■■■□□ 2.1
RAB11FIP3-201ENST00000262305 GOLGA6L22H0YM25 854 aa28.15■■■□□ 2.1
RAB11FIP3-201ENST00000262305 CCDC144AA2RUR9 1427 aa28.14■■■□□ 2.1
RAB11FIP3-201ENST00000262305 NLRP13Q86W25 1043 aa28.14■■■□□ 2.1
RAB11FIP3-201ENST00000262305 CFTRP13569 1480 aa28.13■■■□□ 2.09
RAB11FIP3-201ENST00000262305 SOX12O15370 315 aa28.12■■■□□ 2.09
RAB11FIP3-201ENST00000262305 RCAN3Q9UKA8 241 aa28.11■■■□□ 2.09
RAB11FIP3-201ENST00000262305 U2AF1L5P0DN76 240 aaPredicted RBP28.11■■■□□ 2.09
RAB11FIP3-201ENST00000262305 U2AF1Q01081 240 aaKnown RBP eCLIP28.11■■■□□ 2.092e-6■□□□□ 9
RAB11FIP3-201ENST00000262305 FGD6Q6ZV73 1430 aa28.1■■■□□ 2.09
RAB11FIP3-201ENST00000262305 MYOM3Q5VTT5 1437 aa28.1■■■□□ 2.09
RAB11FIP3-201ENST00000262305 ST20-MTHFSA0A0A6YYL1 179 aa28.08■■■□□ 2.09
RAB11FIP3-201ENST00000262305 NCLP19338 710 aaKnown RBP28.08■■■□□ 2.09
RAB11FIP3-201ENST00000262305 ERICH3Q5RHP9 1530 aa28.05■■■□□ 2.08
RAB11FIP3-201ENST00000262305 PHLDB1Q86UU1 1377 aa28.04■■■□□ 2.08
RAB11FIP3-201ENST00000262305 LRRC9Q6ZRR7 1453 aa28.04■■■□□ 2.08
RAB11FIP3-201ENST00000262305 AQRO60306 1485 aaKnown RBP eCLIP28.04■■■□□ 2.081e-6■■□□□ 14.5
RAB11FIP3-201ENST00000262305 TERF2IPQ9NYB0 399 aa28.04■■■□□ 2.08
RAB11FIP3-201ENST00000262305 NOP58Q9Y2X3 529 aaKnown RBP28.02■■■□□ 2.08
RAB11FIP3-201ENST00000262305 CUX1P39880 1505 aa28.02■■■□□ 2.08
RAB11FIP3-201ENST00000262305 SYNJ1O43426 1573 aa28.01■■■□□ 2.08
RAB11FIP3-201ENST00000262305 CASKIN1Q8WXD9 1431 aa28.01■■■□□ 2.07
RAB11FIP3-201ENST00000262305 IPO8O15397 1037 aaKnown RBP28.01■■■□□ 2.07
RAB11FIP3-201ENST00000262305 RTF1Q92541 710 aaKnown RBP28■■■□□ 2.07
RAB11FIP3-201ENST00000262305 KIF15Q9NS87 1388 aa28■■■□□ 2.07
RAB11FIP3-201ENST00000262305 CALD1Q05682 793 aaKnown RBP28■■■□□ 2.07
RAB11FIP3-201ENST00000262305 PDE3BQ13370 1112 aa27.98■■■□□ 2.07
RAB11FIP3-201ENST00000262305 UACAQ9BZF9 1416 aa27.97■■■□□ 2.07
RAB11FIP3-201ENST00000262305 OS9Q13438 667 aaPredicted RBP27.95■■■□□ 2.07
RAB11FIP3-201ENST00000262305 GOLGA2Q08379 1002 aa27.95■■■□□ 2.06
RAB11FIP3-201ENST00000262305 TRAK1Q9UPV9 953 aa27.94■■■□□ 2.06
RAB11FIP3-201ENST00000262305 NUTM2DQ5VT03 806 aaPredicted RBP27.94■■■□□ 2.06
RAB11FIP3-201ENST00000262305 USP47Q96K76 1375 aa27.94■■■□□ 2.06
RAB11FIP3-201ENST00000262305 PRKRIP1Q9H875 184 aaPredicted RBP27.94■■■□□ 2.06
RAB11FIP3-201ENST00000262305 ARAP1Q96P48 1450 aa27.94■■■□□ 2.06
RAB11FIP3-201ENST00000262305 MYBBP1AQ9BQG0 1328 aaKnown RBP27.94■■■□□ 2.06
RAB11FIP3-201ENST00000262305 GRIN2BQ13224 1484 aa27.94■■■□□ 2.06
RAB11FIP3-201ENST00000262305 ZNF644Q9H582 1327 aaPredicted RBP27.93■■■□□ 2.06
RAB11FIP3-201ENST00000262305 OSCARQ8IYS5 282 aa27.91■■■□□ 2.06
RAB11FIP3-201ENST00000262305 HMGXB3Q12766 1538 aa27.91■■■□□ 2.06
RAB11FIP3-201ENST00000262305 PANK3Q9H999 370 aa27.9■■■□□ 2.06
RAB11FIP3-201ENST00000262305 RBM19Q9Y4C8 960 aaKnown RBP27.9■■■□□ 2.06
RAB11FIP3-201ENST00000262305 PRXQ9BXM0 1461 aa27.9■■■□□ 2.06
RAB11FIP3-201ENST00000262305 FYCO1Q9BQS8 1478 aa27.89■■■□□ 2.06
RAB11FIP3-201ENST00000262305 EID1Q9Y6B2 187 aa27.89■■■□□ 2.06
RAB11FIP3-201ENST00000262305 NCOA2Q15596 1464 aa27.89■■■□□ 2.05
RAB11FIP3-201ENST00000262305 VGFO15240 615 aaPredicted RBP27.88■■■□□ 2.05
RAB11FIP3-201ENST00000262305 TRIM44Q96DX7 344 aaPredicted RBP27.87■■■□□ 2.05
RAB11FIP3-201ENST00000262305 PAK3O75914 559 aaPredicted RBP27.86■■■□□ 2.05
RAB11FIP3-201ENST00000262305 HSP90AB1P08238 724 aaKnown RBP27.85■■■□□ 2.05
RAB11FIP3-201ENST00000262305 TOP2BQ02880 1626 aa27.84■■■□□ 2.05
RAB11FIP3-201ENST00000262305 RWDD1Q9H446 243 aaPredicted RBP27.84■■■□□ 2.05
RAB11FIP3-201ENST00000262305 TCERG1O14776 1098 aaKnown RBP27.83■■■□□ 2.05
RAB11FIP3-201ENST00000262305 CCDC146Q8IYE0 955 aa27.82■■■□□ 2.04
RAB11FIP3-201ENST00000262305 CFAP44Q96MT7 982 aa27.82■■■□□ 2.04
RAB11FIP3-201ENST00000262305 NESP48681 1621 aa27.81■■■□□ 2.04
RAB11FIP3-201ENST00000262305 RRBP1Q9P2E9 1410 aaKnown RBP27.8■■■□□ 2.04
RAB11FIP3-201ENST00000262305 ANKRD50Q9ULJ7 1429 aa27.8■■■□□ 2.04
RAB11FIP3-201ENST00000262305 CYB5RLQ6IPT4 315 aa27.79■■■□□ 2.04
RAB11FIP3-201ENST00000262305 ITPRIPQ8IWB1 547 aa27.79■■■□□ 2.04
RAB11FIP3-201ENST00000262305 HSCBQ8IWL3 235 aa27.78■■■□□ 2.04
RAB11FIP3-201ENST00000262305 KCNJ4P48050 445 aa27.77■■■□□ 2.04
RAB11FIP3-201ENST00000262305 TOPBP1Q92547 1522 aa27.77■■■□□ 2.04
RAB11FIP3-201ENST00000262305 STAC3Q96MF2 364 aa27.76■■■□□ 2.03
RAB11FIP3-201ENST00000262305 SMC4Q9NTJ3 1288 aa27.76■■■□□ 2.03
RAB11FIP3-201ENST00000262305 CHMP4AQ9BY43 222 aa27.76■■■□□ 2.03
RAB11FIP3-201ENST00000262305 CENPJQ9HC77 1338 aaPredicted RBP27.75■■■□□ 2.03
RAB11FIP3-201ENST00000262305 NGDNQ8NEJ9 315 aaKnown RBP27.75■■■□□ 2.03
RAB11FIP3-201ENST00000262305 EFCAB5A4FU69 1503 aa27.75■■■□□ 2.03
RAB11FIP3-201ENST00000262305 EVC2Q86UK5 1308 aa27.74■■■□□ 2.03
RAB11FIP3-201ENST00000262305 PMFBP1Q8TBY8 1022 aa27.74■■■□□ 2.03
RAB11FIP3-201ENST00000262305 POLA1P09884 1462 aaPredicted RBP27.73■■■□□ 2.03
RAB11FIP3-201ENST00000262305 LMOD3Q0VAK6 560 aa27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms