RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 NUP153P49790 1475 aaKnown RBP22.13■■□□□ 1.13
SGCA-201ENST00000262018 MAGI2Q86UL8 1455 aa22.13■■□□□ 1.13
SGCA-201ENST00000262018 STRCQ7RTU9 1775 aa22.1■■□□□ 1.13
SGCA-201ENST00000262018 HECW1Q76N89 1606 aa22.09■■□□□ 1.13
SGCA-201ENST00000262018 SAMD9Q5K651 1589 aa22.09■■□□□ 1.13
SGCA-201ENST00000262018 ARHGEF12Q9NZN5 1544 aa22.09■■□□□ 1.13
SGCA-201ENST00000262018 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.08■■□□□ 1.12
SGCA-201ENST00000262018 UHRF1BP1Q6BDS2 1440 aa22.06■■□□□ 1.12
SGCA-201ENST00000262018 ATP10AO60312 1499 aa22.04■■□□□ 1.12
SGCA-201ENST00000262018 SCAPERQ9BY12 1400 aa22.04■■□□□ 1.12
SGCA-201ENST00000262018 RANGAP1P46060 587 aaPredicted RBP22.03■■□□□ 1.12
SGCA-201ENST00000262018 PTPRTO14522 1441 aa22.02■■□□□ 1.12
SGCA-201ENST00000262018 C9orf84Q5VXU9 1444 aa22.02■■□□□ 1.11
SGCA-201ENST00000262018 LTBP4Q8N2S1 1624 aa21.97■■□□□ 1.11
SGCA-201ENST00000262018 SETD1BQ9UPS6 1966 aaKnown RBP21.95■■□□□ 1.1
SGCA-201ENST00000262018 IQSEC2Q5JU85 1478 aa21.94■■□□□ 1.1
SGCA-201ENST00000262018 PLCH2O75038 1416 aa21.94■■□□□ 1.1
SGCA-201ENST00000262018 MYT1LQ9UL68 1186 aa21.9■■□□□ 1.1
SGCA-201ENST00000262018 EFCAB2Q5VUJ9 269 aa21.89■■□□□ 1.1
SGCA-201ENST00000262018 UBAP1LF5GYI3 381 aa21.88■■□□□ 1.09
SGCA-201ENST00000262018 CSRNP3Q8WYN3 585 aa21.88■■□□□ 1.09
SGCA-201ENST00000262018 ESF1Q9H501 851 aaKnown RBP21.87■■□□□ 1.09
SGCA-201ENST00000262018 CDK13Q14004 1512 aaKnown RBP21.86■■□□□ 1.09
SGCA-201ENST00000262018 AFAP1Q8N556 730 aa21.85■■□□□ 1.09
SGCA-201ENST00000262018 NCOA1Q15788 1441 aa21.85■■□□□ 1.09
SGCA-201ENST00000262018 C3P01024 1663 aa21.84■■□□□ 1.09
SGCA-201ENST00000262018 TRAPPC8Q9Y2L5 1435 aa21.84■■□□□ 1.09
SGCA-201ENST00000262018 ZNF518AQ6AHZ1 1483 aa21.83■■□□□ 1.08
SGCA-201ENST00000262018 ZNF335Q9H4Z2 1342 aaPredicted RBP21.79■■□□□ 1.08
SGCA-201ENST00000262018 DIP2CQ9Y2E4 1556 aa21.79■■□□□ 1.08
SGCA-201ENST00000262018 MYO5CQ9NQX4 1742 aa21.78■■□□□ 1.08
SGCA-201ENST00000262018 KDM5CP41229 1560 aa21.77■■□□□ 1.08
SGCA-201ENST00000262018 ATP1B4Q9UN42 357 aaPredicted RBP21.77■■□□□ 1.08
SGCA-201ENST00000262018 NCKAP5LQ9HCH0 1330 aa21.76■■□□□ 1.07
SGCA-201ENST00000262018 CAMSAP1Q5T5Y3 1602 aa21.75■■□□□ 1.07
SGCA-201ENST00000262018 REREQ9P2R6 1566 aa21.74■■□□□ 1.07
SGCA-201ENST00000262018 ARHGAP5Q13017 1502 aa21.74■■□□□ 1.07
SGCA-201ENST00000262018 ABCA6Q8N139 1617 aa21.72■■□□□ 1.07
SGCA-201ENST00000262018 AGLP35573 1532 aa21.71■■□□□ 1.07
SGCA-201ENST00000262018 CDK11AQ9UQ88 783 aaPredicted RBP21.71■■□□□ 1.07
SGCA-201ENST00000262018 CNTLNQ9NXG0 1405 aa21.7■■□□□ 1.06
SGCA-201ENST00000262018 MLH3Q9UHC1 1453 aa21.69■■□□□ 1.06
SGCA-201ENST00000262018 KIF14Q15058 1648 aa21.69■■□□□ 1.06
SGCA-201ENST00000262018 SCAF1Q9H7N4 1312 aaKnown RBP21.69■■□□□ 1.06
SGCA-201ENST00000262018 MED1Q15648 1581 aaPredicted RBP21.68■■□□□ 1.06
SGCA-201ENST00000262018 HSPA1LP34931 641 aa21.67■■□□□ 1.06
SGCA-201ENST00000262018 NPATQ14207 1427 aa21.66■■□□□ 1.06
SGCA-201ENST00000262018 PIP4K2BP78356 416 aa21.64■■□□□ 1.06
SGCA-201ENST00000262018 PKD2Q13563 968 aa21.64■■□□□ 1.06
SGCA-201ENST00000262018 TROQ12816 1431 aaPredicted RBP21.62■■□□□ 1.05
SGCA-201ENST00000262018 ZMYM3Q14202 1370 aa21.62■■□□□ 1.05
SGCA-201ENST00000262018 CLIP1P30622 1438 aa21.6■■□□□ 1.05
SGCA-201ENST00000262018 PHF23Q9BUL5 403 aaPredicted RBP21.6■■□□□ 1.05
SGCA-201ENST00000262018 PPP6R1Q9UPN7 881 aa21.59■■□□□ 1.05
SGCA-201ENST00000262018 PLA2R1Q13018 1463 aa21.59■■□□□ 1.05
SGCA-201ENST00000262018 EEA1Q15075 1411 aa21.58■■□□□ 1.05
SGCA-201ENST00000262018 FMN1Q68DA7 1419 aa21.57■■□□□ 1.04
SGCA-201ENST00000262018 MROH2AA6NES4 1674 aa21.57■■□□□ 1.04
SGCA-201ENST00000262018 TOM1O60784 492 aa21.56■■□□□ 1.04
SGCA-201ENST00000262018 TCOF1Q13428 1488 aaKnown RBP21.56■■□□□ 1.04
SGCA-201ENST00000262018 CDC42BPBQ9Y5S2 1711 aa21.56■■□□□ 1.04
SGCA-201ENST00000262018 ABCC1P33527 1531 aa21.56■■□□□ 1.04
SGCA-201ENST00000262018 KIDINS220Q9ULH0 1771 aa21.56■■□□□ 1.04
SGCA-201ENST00000262018 MYO3AQ8NEV4 1616 aa21.53■■□□□ 1.04
SGCA-201ENST00000262018 ITSN2Q9NZM3 1697 aa21.53■■□□□ 1.04
SGCA-201ENST00000262018 ZNF142P52746 1687 aaPredicted RBP21.52■■□□□ 1.04
SGCA-201ENST00000262018 SUPT6HQ7KZ85 1726 aaKnown RBP21.52■■□□□ 1.04
SGCA-201ENST00000262018 CEP170BQ9Y4F5 1589 aaPredicted RBP21.52■■□□□ 1.04
SGCA-201ENST00000262018 PREX2Q70Z35 1606 aa21.49■■□□□ 1.03
SGCA-201ENST00000262018 PTPRKQ15262 1439 aa21.49■■□□□ 1.03
SGCA-201ENST00000262018 CLTCQ00610 1675 aaKnown RBP21.48■■□□□ 1.03
SGCA-201ENST00000262018 EHMT2Q96KQ7 1210 aa21.47■■□□□ 1.03
SGCA-201ENST00000262018 SPAG9O60271 1321 aaKnown RBP21.46■■□□□ 1.03
SGCA-201ENST00000262018 CPS1P31327 1500 aa21.45■■□□□ 1.02
SGCA-201ENST00000262018 SAMD9LQ8IVG5 1584 aa21.45■■□□□ 1.02
SGCA-201ENST00000262018 ARHGAP35Q9NRY4 1499 aa21.45■■□□□ 1.02
SGCA-201ENST00000262018 ZNF777Q9ULD5 760 aaPredicted RBP21.45■■□□□ 1.02
SGCA-201ENST00000262018 UBTFP17480 764 aaKnown RBP21.44■■□□□ 1.02
SGCA-201ENST00000262018 GGT6Q6P531 493 aa21.44■■□□□ 1.02
SGCA-201ENST00000262018 SENP3Q9H4L4 574 aaPredicted RBP21.43■■□□□ 1.02
SGCA-201ENST00000262018 SHANK2Q9UPX8 1470 aa21.42■■□□□ 1.02
SGCA-201ENST00000262018 LRRIQ1Q96JM4 1722 aa21.41■■□□□ 1.02
SGCA-201ENST00000262018 A2ML1A8K2U0 1454 aa21.4■■□□□ 1.02
SGCA-201ENST00000262018 HNRNPMP52272 730 aaKnown RBP eCLIP21.39■■□□□ 1.02
SGCA-201ENST00000262018 A2MP01023 1474 aa21.38■■□□□ 1.01
SGCA-201ENST00000262018 DNMT1P26358 1616 aaKnown RBP21.38■■□□□ 1.01
SGCA-201ENST00000262018 SYCP2Q9BX26 1530 aa21.36■■□□□ 1.01
SGCA-201ENST00000262018 CDC42BPAQ5VT25 1732 aa21.36■■□□□ 1.01
SGCA-201ENST00000262018 ATP7AQ04656 1500 aa21.35■■□□□ 1.01
SGCA-201ENST00000262018 PLXNC1O60486 1568 aa21.35■■□□□ 1.01
SGCA-201ENST00000262018 NEURL4Q96JN8 1562 aa21.35■■□□□ 1.01
SGCA-201ENST00000262018 POLR1AO95602 1720 aaPredicted RBP21.33■■□□□ 1
SGCA-201ENST00000262018 ALKQ9UM73 1620 aa21.33■■□□□ 1
SGCA-201ENST00000262018 ANKLE2Q86XL3 938 aa21.31■■□□□ 1
SGCA-201ENST00000262018 CCDC18Q5T9S5 1454 aa21.3■■□□□ 1
SGCA-201ENST00000262018 VWDEQ8N2E2 1590 aa21.29■■□□□ 1
SGCA-201ENST00000262018 RGS17Q9UGC6 210 aaPredicted RBP21.29■■□□□ 1
SGCA-201ENST00000262018 TNRQ92752 1358 aa21.29■■□□□ 1
SGCA-201ENST00000262018 INO80Q9ULG1 1556 aaPredicted RBP21.29■■□□□ 1
SGCA-201ENST00000262018 FBXO31Q5XUX0 539 aaPredicted RBP21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms