RNA–Protein interactions for RNA: ENST00000260270.2

FDX1-201, Transcript of ferredoxin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FDX1, Length 3,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDX1-201ENST00000260270 RPRD2Q5VT52 1461 aaKnown RBP23.49■■□□□ 1.35
FDX1-201ENST00000260270 ARHGEF5Q12774 1597 aa23.49■■□□□ 1.35
FDX1-201ENST00000260270 KIF14Q15058 1648 aa23.49■■□□□ 1.35
FDX1-201ENST00000260270 ABCC10Q5T3U5 1492 aa23.49■■□□□ 1.35
FDX1-201ENST00000260270 CCER2I3L3R5 266 aa23.45■■□□□ 1.34
FDX1-201ENST00000260270 CAMSAP2Q08AD1 1489 aa23.44■■□□□ 1.34
FDX1-201ENST00000260270 SIN3AQ96ST3 1273 aa23.43■■□□□ 1.34
FDX1-201ENST00000260270 GPATCH8Q9UKJ3 1502 aaKnown RBP23.43■■□□□ 1.34
FDX1-201ENST00000260270 PZPP20742 1482 aa23.42■■□□□ 1.34
FDX1-201ENST00000260270 MAST1Q9Y2H9 1570 aa23.41■■□□□ 1.34
FDX1-201ENST00000260270 ANKRD30BQ9BXX2 1392 aa23.39■■□□□ 1.34
FDX1-201ENST00000260270 PREX2Q70Z35 1606 aa23.39■■□□□ 1.33
FDX1-201ENST00000260270 BCL11AQ9H165 835 aa23.38■■□□□ 1.33
FDX1-201ENST00000260270 SPATA31E1Q6ZUB1 1445 aa23.37■■□□□ 1.33
FDX1-201ENST00000260270 ITGAEP38570 1179 aa23.37■■□□□ 1.33
FDX1-201ENST00000260270 TONSLQ96HA7 1378 aa23.35■■□□□ 1.33
FDX1-201ENST00000260270 PTPRGP23470 1445 aa23.33■■□□□ 1.33
FDX1-201ENST00000260270 NCOA1Q15788 1441 aa23.32■■□□□ 1.32
FDX1-201ENST00000260270 CDC42BPBQ9Y5S2 1711 aa23.31■■□□□ 1.32
FDX1-201ENST00000260270 ARHGEF12Q9NZN5 1544 aa23.31■■□□□ 1.32
FDX1-201ENST00000260270 UNC13BO14795 1591 aa23.28■■□□□ 1.32
FDX1-201ENST00000260270 PLB1Q6P1J6 1458 aa23.28■■□□□ 1.32
FDX1-201ENST00000260270 CARMIL2Q6F5E8 1435 aa23.27■■□□□ 1.32
FDX1-201ENST00000260270 UHRF1BP1Q6BDS2 1440 aa23.27■■□□□ 1.32
FDX1-201ENST00000260270 PLXNC1O60486 1568 aa23.25■■□□□ 1.31
FDX1-201ENST00000260270 LAMC1P11047 1609 aa23.25■■□□□ 1.31
FDX1-201ENST00000260270 KDM5CP41229 1560 aa23.25■■□□□ 1.31
FDX1-201ENST00000260270 CHD1O14646 1710 aa23.25■■□□□ 1.31
FDX1-201ENST00000260270 E9PCH4 1651 aa23.24■■□□□ 1.31
FDX1-201ENST00000260270 PRG4Q92954 1404 aaPredicted RBP23.22■■□□□ 1.31
FDX1-201ENST00000260270 ATP10BO94823 1461 aa23.22■■□□□ 1.31
FDX1-201ENST00000260270 SAMD9LQ8IVG5 1584 aa23.2■■□□□ 1.31
FDX1-201ENST00000260270 CNTLNQ9NXG0 1405 aa23.19■■□□□ 1.3
FDX1-201ENST00000260270 SUPT16HQ9Y5B9 1047 aaKnown RBP23.19■■□□□ 1.3
FDX1-201ENST00000260270 ERCC6Q03468 1493 aa23.18■■□□□ 1.3
FDX1-201ENST00000260270 MAGI2Q86UL8 1455 aa23.17■■□□□ 1.3
FDX1-201ENST00000260270 MPHOSPH9Q99550 1183 aa23.17■■□□□ 1.3
FDX1-201ENST00000260270 ANP32EQ9BTT0 268 aa23.17■■□□□ 1.3
FDX1-201ENST00000260270 KIAA1107Q9UPP5 1409 aa23.17■■□□□ 1.3
FDX1-201ENST00000260270 ATP1B4Q9UN42 357 aaPredicted RBP23.15■■□□□ 1.3
FDX1-201ENST00000260270 BCORL1Q5H9F3 1711 aa23.14■■□□□ 1.29
FDX1-201ENST00000260270 IQGAP3Q86VI3 1631 aa23.13■■□□□ 1.29
FDX1-201ENST00000260270 BCANQ96GW7 911 aa23.12■■□□□ 1.29
FDX1-201ENST00000260270 CDK11AQ9UQ88 783 aaPredicted RBP23.12■■□□□ 1.29
FDX1-201ENST00000260270 RALGAPBQ86X10 1494 aa23.12■■□□□ 1.29
FDX1-201ENST00000260270 MYO5CQ9NQX4 1742 aa23.11■■□□□ 1.29
FDX1-201ENST00000260270 CLASP1Q7Z460 1538 aa23.1■■□□□ 1.29
FDX1-201ENST00000260270 ARAP3Q8WWN8 1544 aa23.08■■□□□ 1.29
FDX1-201ENST00000260270 WASHC2AQ641Q2 1341 aa23.08■■□□□ 1.29
FDX1-201ENST00000260270 TSHZ2Q9NRE2 1034 aa23.07■■□□□ 1.28
FDX1-201ENST00000260270 UHRF1BP1LA0JNW5 1464 aa23.06■■□□□ 1.28
FDX1-201ENST00000260270 TRPM1Q7Z4N2 1603 aa23.06■■□□□ 1.28
FDX1-201ENST00000260270 KCNH8Q96L42 1107 aa23.05■■□□□ 1.28
FDX1-201ENST00000260270 ATP10AO60312 1499 aa23.05■■□□□ 1.28
FDX1-201ENST00000260270 DDX10Q13206 875 aaKnown RBP23.05■■□□□ 1.28
FDX1-201ENST00000260270 ABCC2Q92887 1545 aa23.05■■□□□ 1.28
FDX1-201ENST00000260270 CCDC7Q96M83 1385 aa23.04■■□□□ 1.28
FDX1-201ENST00000260270 TTC37Q6PGP7 1564 aa23.04■■□□□ 1.28
FDX1-201ENST00000260270 C9orf84Q5VXU9 1444 aa23.04■■□□□ 1.28
FDX1-201ENST00000260270 ARID4BQ4LE39 1312 aaPredicted RBP23.04■■□□□ 1.28
FDX1-201ENST00000260270 ANKRD30AQ9BXX3 1397 aa23.03■■□□□ 1.28
FDX1-201ENST00000260270 RRP7BPQ9NSQ0 103 aa23.02■■□□□ 1.28
FDX1-201ENST00000260270 NEURL4Q96JN8 1562 aa23.02■■□□□ 1.28
FDX1-201ENST00000260270 RNF17Q9BXT8 1623 aaKnown RBP23.02■■□□□ 1.28
FDX1-201ENST00000260270 CCDC141Q6ZP82 1450 aa23.02■■□□□ 1.28
FDX1-201ENST00000260270 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.01■■□□□ 1.27
FDX1-201ENST00000260270 ANKRD50Q9ULJ7 1429 aa23■■□□□ 1.27
FDX1-201ENST00000260270 DEPDC5O75140 1603 aa22.99■■□□□ 1.27
FDX1-201ENST00000260270 JPH4Q96JJ6 628 aa22.98■■□□□ 1.27
FDX1-201ENST00000260270 ZNF644Q9H582 1327 aaPredicted RBP22.97■■□□□ 1.27
FDX1-201ENST00000260270 ANP32CO43423 234 aa22.97■■□□□ 1.27
FDX1-201ENST00000260270 HSPA5P11021 654 aaKnown RBP22.97■■□□□ 1.27
FDX1-201ENST00000260270 L3MBTL2Q969R5 705 aa22.97■■□□□ 1.27
FDX1-201ENST00000260270 FAM135AQ9P2D6 1515 aa22.96■■□□□ 1.27
FDX1-201ENST00000260270 PLEKHH2Q8IVE3 1493 aa22.94■■□□□ 1.26
FDX1-201ENST00000260270 ZCCHC11Q5TAX3 1644 aaKnown RBP22.93■■□□□ 1.26
FDX1-201ENST00000260270 DHX29Q7Z478 1369 aaKnown RBP22.92■■□□□ 1.26
FDX1-201ENST00000260270 EIF4G2P78344 907 aaKnown RBP eCLIP22.92■■□□□ 1.26
FDX1-201ENST00000260270 EIF2AK4Q9P2K8 1649 aaKnown RBP22.91■■□□□ 1.26
FDX1-201ENST00000260270 NBPF8Q3BBV2 869 aa22.91■■□□□ 1.26
FDX1-201ENST00000260270 CHMP7Q8WUX9 453 aaPredicted RBP22.89■■□□□ 1.26
FDX1-201ENST00000260270 ABCC1P33527 1531 aa22.89■■□□□ 1.25
FDX1-201ENST00000260270 ZMYM4Q5VZL5 1548 aa22.89■■□□□ 1.25
FDX1-201ENST00000260270 PRDM15P57071 1507 aaPredicted RBP22.88■■□□□ 1.25
FDX1-201ENST00000260270 CHIC2Q9UKJ5 165 aa22.87■■□□□ 1.25
FDX1-201ENST00000260270 DUOX2Q9NRD8 1548 aa22.87■■□□□ 1.25
FDX1-201ENST00000260270 CFDP1Q9UEE9 299 aaPredicted RBP22.87■■□□□ 1.25
FDX1-201ENST00000260270 SYCP2Q9BX26 1530 aa22.86■■□□□ 1.25
FDX1-201ENST00000260270 RSPH4AQ5TD94 716 aa22.86■■□□□ 1.25
FDX1-201ENST00000260270 GPRASP1Q5JY77 1395 aa22.85■■□□□ 1.25
FDX1-201ENST00000260270 VWDEQ8N2E2 1590 aa22.85■■□□□ 1.25
FDX1-201ENST00000260270 ERBINQ96RT1 1412 aa22.85■■□□□ 1.25
FDX1-201ENST00000260270 ABCA9Q8IUA7 1624 aa22.84■■□□□ 1.25
FDX1-201ENST00000260270 CEP152O94986 1710 aa22.83■■□□□ 1.25
FDX1-201ENST00000260270 ERICH6BQ5W0A0 696 aa22.82■■□□□ 1.24
FDX1-201ENST00000260270 C11orf95C9JLR9 678 aaPredicted RBP22.82■■□□□ 1.24
FDX1-201ENST00000260270 KIAA1210Q9ULL0 1709 aa22.81■■□□□ 1.24
FDX1-201ENST00000260270 ROCK2O75116 1388 aaKnown RBP22.81■■□□□ 1.24
FDX1-201ENST00000260270 ERCC6L2Q5T890 1561 aa22.8■■□□□ 1.24
FDX1-201ENST00000260270 WDR7Q9Y4E6 1490 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms