RNA–Protein interactions for RNA: ENST00000259997.9

CPEB2-201, Transcript of cytoplasmic polyadenylation element binding protein 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CPEB2, Length 5,612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB2-201ENST00000259997 SMARCA4P51532 1647 aa20.93■□□□□ 0.94
CPEB2-201ENST00000259997 RTF1Q92541 710 aaKnown RBP20.91■□□□□ 0.94
CPEB2-201ENST00000259997 MEX3CQ5U5Q3 659 aaKnown RBP20.91■□□□□ 0.94
CPEB2-201ENST00000259997 U2SURPO15042 1029 aaKnown RBP20.9■□□□□ 0.94
CPEB2-201ENST00000259997 SOX12O15370 315 aa20.9■□□□□ 0.94
CPEB2-201ENST00000259997 SAFB2Q14151 953 aaKnown RBP eCLIP20.9■□□□□ 0.94
CPEB2-201ENST00000259997 EIF3AQ14152 1382 aaKnown RBP20.9■□□□□ 0.94
CPEB2-201ENST00000259997 NOP58Q9Y2X3 529 aaKnown RBP20.89■□□□□ 0.94
CPEB2-201ENST00000259997 HIRIP3Q9BW71 556 aaPredicted RBP20.89■□□□□ 0.93
CPEB2-201ENST00000259997 LAS1LQ9Y4W2 734 aaKnown RBP20.89■□□□□ 0.93
CPEB2-201ENST00000259997 BECN1Q14457 450 aa20.89■□□□□ 0.93
CPEB2-201ENST00000259997 PKD2Q13563 968 aa20.88■□□□□ 0.93
CPEB2-201ENST00000259997 NGDNQ8NEJ9 315 aaKnown RBP20.88■□□□□ 0.93
CPEB2-201ENST00000259997 NUP155O75694 1391 aa20.88■□□□□ 0.93
CPEB2-201ENST00000259997 MS4A1P11836 297 aa20.86■□□□□ 0.93
CPEB2-201ENST00000259997 HNRNPMP52272 730 aaKnown RBP eCLIP20.85■□□□□ 0.93
CPEB2-201ENST00000259997 NCAPD3P42695 1498 aa20.85■□□□□ 0.93
CPEB2-201ENST00000259997 MORC1Q86VD1 984 aa20.84■□□□□ 0.93
CPEB2-201ENST00000259997 DCAF8L1A6NGE4 600 aa20.84■□□□□ 0.93
CPEB2-201ENST00000259997 CASC1Q6TDU7 716 aa20.84■□□□□ 0.93
CPEB2-201ENST00000259997 FTSJ3Q8IY81 847 aaKnown RBP20.83■□□□□ 0.93
CPEB2-201ENST00000259997 GAPVD1Q14C86 1478 aa20.83■□□□□ 0.93
CPEB2-201ENST00000259997 NAP1L5Q96NT1 182 aaPredicted RBP20.82■□□□□ 0.92
CPEB2-201ENST00000259997 TERF2IPQ9NYB0 399 aa20.82■□□□□ 0.92
CPEB2-201ENST00000259997 TIMELESSQ9UNS1 1208 aa20.81■□□□□ 0.92
CPEB2-201ENST00000259997 OS9Q13438 667 aaPredicted RBP20.81■□□□□ 0.92
CPEB2-201ENST00000259997 TRIM44Q96DX7 344 aaPredicted RBP20.8■□□□□ 0.92
CPEB2-201ENST00000259997 FOXD1Q16676 465 aa20.8■□□□□ 0.92
CPEB2-201ENST00000259997 CCER2I3L3R5 266 aa20.79■□□□□ 0.92
CPEB2-201ENST00000259997 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.79■□□□□ 0.92
CPEB2-201ENST00000259997 UACAQ9BZF9 1416 aa20.79■□□□□ 0.92
CPEB2-201ENST00000259997 CALD1Q05682 793 aaKnown RBP20.77■□□□□ 0.92
CPEB2-201ENST00000259997 RBM19Q9Y4C8 960 aaKnown RBP20.77■□□□□ 0.92
CPEB2-201ENST00000259997 VPS8Q8N3P4 1428 aa20.77■□□□□ 0.92
CPEB2-201ENST00000259997 MRC2Q9UBG0 1479 aa20.75■□□□□ 0.91
CPEB2-201ENST00000259997 NEUROD2Q15784 382 aa20.75■□□□□ 0.91
CPEB2-201ENST00000259997 WIZO95785 1651 aa20.75■□□□□ 0.91
CPEB2-201ENST00000259997 VGFO15240 615 aaPredicted RBP20.74■□□□□ 0.91
CPEB2-201ENST00000259997 EVA1CP58658 441 aa20.72■□□□□ 0.91
CPEB2-201ENST00000259997 FHOD3Q2V2M9 1422 aa20.72■□□□□ 0.91
CPEB2-201ENST00000259997 TSHZ2Q9NRE2 1034 aa20.69■□□□□ 0.9
CPEB2-201ENST00000259997 GRIN2BQ13224 1484 aa20.69■□□□□ 0.9
CPEB2-201ENST00000259997 SETD5Q9C0A6 1442 aa20.69■□□□□ 0.9
CPEB2-201ENST00000259997 ATF3P18847 181 aa20.68■□□□□ 0.9
CPEB2-201ENST00000259997 IFT140Q96RY7 1462 aa20.68■□□□□ 0.9
CPEB2-201ENST00000259997 CC2D1BQ5T0F9 858 aaKnown RBP20.67■□□□□ 0.9
CPEB2-201ENST00000259997 PHF23Q9BUL5 403 aaPredicted RBP20.67■□□□□ 0.9
CPEB2-201ENST00000259997 HDAC5Q9UQL6 1122 aa20.67■□□□□ 0.9
CPEB2-201ENST00000259997 G3V3G9 751 aa20.67■□□□□ 0.9
CPEB2-201ENST00000259997 DCAF8Q5TAQ9 597 aa20.67■□□□□ 0.9
CPEB2-201ENST00000259997 AMPHP49418 695 aa20.67■□□□□ 0.9
CPEB2-201ENST00000259997 FGD5Q6ZNL6 1462 aa20.66■□□□□ 0.9
CPEB2-201ENST00000259997 ROCK2O75116 1388 aaKnown RBP20.65■□□□□ 0.9
CPEB2-201ENST00000259997 GOLGA6L22H0YM25 854 aa20.65■□□□□ 0.9
CPEB2-201ENST00000259997 ZNF330Q9Y3S2 320 aaPredicted RBP20.65■□□□□ 0.9
CPEB2-201ENST00000259997 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.62■□□□□ 0.89
CPEB2-201ENST00000259997 POGZQ7Z3K3 1410 aa20.62■□□□□ 0.89
CPEB2-201ENST00000259997 NCLP19338 710 aaKnown RBP20.62■□□□□ 0.89
CPEB2-201ENST00000259997 MPHOSPH9Q99550 1183 aa20.62■□□□□ 0.89
CPEB2-201ENST00000259997 SIN3AQ96ST3 1273 aa20.6■□□□□ 0.89
CPEB2-201ENST00000259997 GTF2E1P29083 439 aaPredicted RBP20.59■□□□□ 0.89
CPEB2-201ENST00000259997 AQRO60306 1485 aaKnown RBP eCLIP20.57■□□□□ 0.88
CPEB2-201ENST00000259997 ZRSR1Q15695 479 aaKnown RBP20.56■□□□□ 0.88
CPEB2-201ENST00000259997 B4GALNT3Q6L9W6 998 aa20.56■□□□□ 0.88
CPEB2-201ENST00000259997 FGD1P98174 961 aa20.55■□□□□ 0.88
CPEB2-201ENST00000259997 CC2D2AQ9P2K1 1620 aa20.55■□□□□ 0.88
CPEB2-201ENST00000259997 NUTM2DQ5VT03 806 aaPredicted RBP20.55■□□□□ 0.88
CPEB2-201ENST00000259997 LMOD3Q0VAK6 560 aa20.55■□□□□ 0.88
CPEB2-201ENST00000259997 MSH5O43196 834 aa20.54■□□□□ 0.88
CPEB2-201ENST00000259997 KTN1Q86UP2 1357 aaKnown RBP20.53■□□□□ 0.88
CPEB2-201ENST00000259997 KCNJ4P48050 445 aa20.53■□□□□ 0.88
CPEB2-201ENST00000259997 ISY1Q9ULR0 285 aaKnown RBP20.53■□□□□ 0.88
CPEB2-201ENST00000259997 CCDC144AA2RUR9 1427 aa20.53■□□□□ 0.88
CPEB2-201ENST00000259997 STK31Q9BXU1 1019 aa20.52■□□□□ 0.88
CPEB2-201ENST00000259997 PSME1Q06323 249 aa20.52■□□□□ 0.88
CPEB2-201ENST00000259997 RAD54L2Q9Y4B4 1467 aa20.52■□□□□ 0.88
CPEB2-201ENST00000259997 SF3B2Q13435 895 aaKnown RBP20.51■□□□□ 0.87
CPEB2-201ENST00000259997 PRG4Q92954 1404 aaPredicted RBP20.51■□□□□ 0.87
CPEB2-201ENST00000259997 TAF7LQ5H9L4 462 aa20.51■□□□□ 0.87
CPEB2-201ENST00000259997 IPO8O15397 1037 aaKnown RBP20.5■□□□□ 0.87
CPEB2-201ENST00000259997 L1TD1Q5T7N2 865 aaKnown RBP20.5■□□□□ 0.87
CPEB2-201ENST00000259997 U2AF1L5P0DN76 240 aaPredicted RBP20.5■□□□□ 0.87
CPEB2-201ENST00000259997 U2AF1Q01081 240 aaKnown RBP eCLIP20.5■□□□□ 0.87
CPEB2-201ENST00000259997 SYNJ2O15056 1496 aa20.49■□□□□ 0.87
CPEB2-201ENST00000259997 CFAP44Q96MT7 982 aa20.49■□□□□ 0.87
CPEB2-201ENST00000259997 FRAT1Q92837 279 aaPredicted RBP20.49■□□□□ 0.87
CPEB2-201ENST00000259997 NUTM2FA1L443 756 aa20.48■□□□□ 0.87
CPEB2-201ENST00000259997 C1orf141Q5JVX7 400 aa20.48■□□□□ 0.87
CPEB2-201ENST00000259997 PRKCSHP14314 528 aaPredicted RBP20.48■□□□□ 0.87
CPEB2-201ENST00000259997 EVC2Q86UK5 1308 aa20.48■□□□□ 0.87
CPEB2-201ENST00000259997 THEMISQ8N1K5 641 aaPredicted RBP20.47■□□□□ 0.87
CPEB2-201ENST00000259997 COG3Q96JB2 828 aa20.47■□□□□ 0.87
CPEB2-201ENST00000259997 WASHC2AQ641Q2 1341 aa20.46■□□□□ 0.87
CPEB2-201ENST00000259997 STAC3Q96MF2 364 aa20.46■□□□□ 0.87
CPEB2-201ENST00000259997 LTV1Q96GA3 475 aaPredicted RBP20.45■□□□□ 0.86
CPEB2-201ENST00000259997 KANK4Q5T7N3 995 aaPredicted RBP20.45■□□□□ 0.86
CPEB2-201ENST00000259997 TRAK1Q9UPV9 953 aa20.45■□□□□ 0.86
CPEB2-201ENST00000259997 HMGB2P26583 209 aaKnown RBP20.43■□□□□ 0.86
CPEB2-201ENST00000259997 GORABQ5T7V8 394 aa20.42■□□□□ 0.86
CPEB2-201ENST00000259997 RSPH6AQ9H0K4 717 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms