RNA–Protein interactions for RNA: ENST00000259154.8

KCTD3-201, Transcript of potassium channel tetramerization domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCTD3, Length 3,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-201ENST00000259154 ARID4BQ4LE39 1312 aaPredicted RBP19.86■□□□□ 0.77
KCTD3-201ENST00000259154 MSH5O43196 834 aa19.85■□□□□ 0.77
KCTD3-201ENST00000259154 CCDC18Q5T9S5 1454 aa19.85■□□□□ 0.77
KCTD3-201ENST00000259154 FYCO1Q9BQS8 1478 aa19.84■□□□□ 0.77
KCTD3-201ENST00000259154 EIF4G3O43432 1585 aaKnown RBP19.84■□□□□ 0.77
KCTD3-201ENST00000259154 NCOA2Q15596 1464 aa19.81■□□□□ 0.76
KCTD3-201ENST00000259154 IFT140Q96RY7 1462 aa19.81■□□□□ 0.76
KCTD3-201ENST00000259154 RGS3P49796 1198 aa19.81■□□□□ 0.76
KCTD3-201ENST00000259154 ZNF644Q9H582 1327 aaPredicted RBP19.81■□□□□ 0.76
KCTD3-201ENST00000259154 FMN1Q68DA7 1419 aa19.8■□□□□ 0.76
KCTD3-201ENST00000259154 ZNF608Q9ULD9 1512 aaPredicted RBP19.8■□□□□ 0.76
KCTD3-201ENST00000259154 SLC4A3P48751 1232 aa19.78■□□□□ 0.76
KCTD3-201ENST00000259154 MAGI3Q5TCQ9 1506 aa19.77■□□□□ 0.76
KCTD3-201ENST00000259154 PRKCSHP14314 528 aaPredicted RBP19.77■□□□□ 0.75
KCTD3-201ENST00000259154 CCDC184Q52MB2 194 aa19.77■□□□□ 0.75
KCTD3-201ENST00000259154 PAK3O75914 559 aaPredicted RBP19.76■□□□□ 0.75
KCTD3-201ENST00000259154 IL27Q8NEV9 243 aa19.76■□□□□ 0.75
KCTD3-201ENST00000259154 NAIPQ13075 1403 aa19.76■□□□□ 0.75
KCTD3-201ENST00000259154 CCER2I3L3R5 266 aa19.76■□□□□ 0.75
KCTD3-201ENST00000259154 HSPA5P11021 654 aaKnown RBP19.75■□□□□ 0.75
KCTD3-201ENST00000259154 CDK13Q14004 1512 aaKnown RBP19.74■□□□□ 0.75
KCTD3-201ENST00000259154 GRIN2BQ13224 1484 aa19.73■□□□□ 0.75
KCTD3-201ENST00000259154 MYOM3Q5VTT5 1437 aa19.72■□□□□ 0.75
KCTD3-201ENST00000259154 C11orf95C9JLR9 678 aaPredicted RBP19.71■□□□□ 0.75
KCTD3-201ENST00000259154 UGGT2Q9NYU1 1516 aa19.7■□□□□ 0.74
KCTD3-201ENST00000259154 KDM6BO15054 1643 aa19.7■□□□□ 0.74
KCTD3-201ENST00000259154 IQGAP2Q13576 1575 aa19.69■□□□□ 0.74
KCTD3-201ENST00000259154 HFM1A2PYH4 1435 aa19.69■□□□□ 0.74
KCTD3-201ENST00000259154 PTPN23Q9H3S7 1636 aa19.69■□□□□ 0.74
KCTD3-201ENST00000259154 L3MBTL2Q969R5 705 aa19.69■□□□□ 0.74
KCTD3-201ENST00000259154 WASHC2AQ641Q2 1341 aa19.68■□□□□ 0.74
KCTD3-201ENST00000259154 UACAQ9BZF9 1416 aa19.68■□□□□ 0.74
KCTD3-201ENST00000259154 ARHGEF11O15085 1522 aa19.67■□□□□ 0.74
KCTD3-201ENST00000259154 SPRYD3Q8NCJ5 442 aa19.67■□□□□ 0.74
KCTD3-201ENST00000259154 IPO9Q96P70 1041 aaKnown RBP19.67■□□□□ 0.74
KCTD3-201ENST00000259154 MPHOSPH9Q99550 1183 aa19.66■□□□□ 0.74
KCTD3-201ENST00000259154 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.65■□□□□ 0.743e-6■■■■□ 20.1
KCTD3-201ENST00000259154 TIMELESSQ9UNS1 1208 aa19.65■□□□□ 0.74
KCTD3-201ENST00000259154 NAP1L5Q96NT1 182 aaPredicted RBP19.65■□□□□ 0.74
KCTD3-201ENST00000259154 PPM1GO15355 546 aaPredicted RBP19.62■□□□□ 0.73
KCTD3-201ENST00000259154 FANCIQ9NVI1 1328 aa19.62■□□□□ 0.73
KCTD3-201ENST00000259154 RGL3Q3MIN7 710 aa19.62■□□□□ 0.73
KCTD3-201ENST00000259154 SENP3Q9H4L4 574 aaPredicted RBP19.62■□□□□ 0.73
KCTD3-201ENST00000259154 CEP170Q5SW79 1584 aa19.62■□□□□ 0.73
KCTD3-201ENST00000259154 DENND4BO75064 1496 aaPredicted RBP19.62■□□□□ 0.73
KCTD3-201ENST00000259154 NBPF8Q3BBV2 869 aa19.61■□□□□ 0.73
KCTD3-201ENST00000259154 HSP90AA1P07900 732 aaKnown RBP19.61■□□□□ 0.73
KCTD3-201ENST00000259154 GLIPR1L2Q4G1C9 344 aa19.6■□□□□ 0.73
KCTD3-201ENST00000259154 DISP1Q96F81 1524 aa19.6■□□□□ 0.73
KCTD3-201ENST00000259154 KIAA0556O60303 1618 aa19.59■□□□□ 0.73
KCTD3-201ENST00000259154 MAGI1Q96QZ7 1491 aaPredicted RBP19.58■□□□□ 0.73
KCTD3-201ENST00000259154 TSPY4P0CV99 314 aa19.58■□□□□ 0.73
KCTD3-201ENST00000259154 TSPY10P0CW01 314 aa19.58■□□□□ 0.73
KCTD3-201ENST00000259154 GRIN2AQ12879 1464 aa19.58■□□□□ 0.72
KCTD3-201ENST00000259154 CFDP1Q9UEE9 299 aaPredicted RBP19.57■□□□□ 0.72
KCTD3-201ENST00000259154 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.56■□□□□ 0.72
KCTD3-201ENST00000259154 SUPT6HQ7KZ85 1726 aaKnown RBP19.55■□□□□ 0.72
KCTD3-201ENST00000259154 GZF1Q9H116 711 aaPredicted RBP19.55■□□□□ 0.72
KCTD3-201ENST00000259154 SLKQ9H2G2 1235 aaPredicted RBP19.55■□□□□ 0.72
KCTD3-201ENST00000259154 EPRSP07814 1512 aaKnown RBP19.55■□□□□ 0.72
KCTD3-201ENST00000259154 CC2D1BQ5T0F9 858 aaKnown RBP19.55■□□□□ 0.72
KCTD3-201ENST00000259154 KDM5BQ9UGL1 1544 aa19.55■□□□□ 0.72
KCTD3-201ENST00000259154 PLIN1O60240 522 aa19.54■□□□□ 0.72
KCTD3-201ENST00000259154 PLEKHD1A6NEE1 506 aa19.54■□□□□ 0.72
KCTD3-201ENST00000259154 NEUROD2Q15784 382 aa19.53■□□□□ 0.72
KCTD3-201ENST00000259154 ARID3AQ99856 593 aa19.53■□□□□ 0.72
KCTD3-201ENST00000259154 KIAA0586Q9BVV6 1533 aa19.52■□□□□ 0.72
KCTD3-201ENST00000259154 UPF2Q9HAU5 1272 aaKnown RBP19.52■□□□□ 0.72
KCTD3-201ENST00000259154 ERCC6Q03468 1493 aa19.52■□□□□ 0.72
KCTD3-201ENST00000259154 DDRGK1Q96HY6 314 aa19.52■□□□□ 0.72
KCTD3-201ENST00000259154 EHBP1L1Q8N3D4 1523 aa19.51■□□□□ 0.71
KCTD3-201ENST00000259154 NUP160Q12769 1436 aa19.51■□□□□ 0.71
KCTD3-201ENST00000259154 BRPF3Q9ULD4 1205 aa19.5■□□□□ 0.71
KCTD3-201ENST00000259154 SYNJ2O15056 1496 aa19.49■□□□□ 0.71
KCTD3-201ENST00000259154 WDR43Q15061 677 aaKnown RBP eCLIP19.49■□□□□ 0.71
KCTD3-201ENST00000259154 ERICH6BQ5W0A0 696 aa19.49■□□□□ 0.71
KCTD3-201ENST00000259154 HECW1Q76N89 1606 aa19.49■□□□□ 0.71
KCTD3-201ENST00000259154 EXOC6Q8TAG9 804 aa19.48■□□□□ 0.71
KCTD3-201ENST00000259154 PRG4Q92954 1404 aaPredicted RBP19.47■□□□□ 0.71
KCTD3-201ENST00000259154 CARD11Q9BXL7 1154 aa19.47■□□□□ 0.71
KCTD3-201ENST00000259154 TPRNQ4KMQ1 711 aa19.46■□□□□ 0.71
KCTD3-201ENST00000259154 ZBTB7CA1YPR0 619 aa19.45■□□□□ 0.7
KCTD3-201ENST00000259154 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.45■□□□□ 0.7
KCTD3-201ENST00000259154 FRAT1Q92837 279 aaPredicted RBP19.43■□□□□ 0.7
KCTD3-201ENST00000259154 PDE4AP27815 886 aa19.42■□□□□ 0.7
KCTD3-201ENST00000259154 SKAP1Q86WV1 359 aa19.42■□□□□ 0.7
KCTD3-201ENST00000259154 RCAN3Q9UKA8 241 aa19.41■□□□□ 0.7
KCTD3-201ENST00000259154 PRKRIP1Q9H875 184 aaPredicted RBP19.41■□□□□ 0.7
KCTD3-201ENST00000259154 SHROOM2Q13796 1616 aa19.4■□□□□ 0.7
KCTD3-201ENST00000259154 CHGAP10645 457 aaKnown RBP19.4■□□□□ 0.7
KCTD3-201ENST00000259154 NUDCQ9Y266 331 aa19.4■□□□□ 0.7
KCTD3-201ENST00000259154 ABCC5O15440 1437 aa19.4■□□□□ 0.7
KCTD3-201ENST00000259154 PLB1Q6P1J6 1458 aa19.4■□□□□ 0.7
KCTD3-201ENST00000259154 RAPGEF6Q8TEU7 1601 aa19.4■□□□□ 0.7
KCTD3-201ENST00000259154 KIF7Q2M1P5 1343 aa19.39■□□□□ 0.69
KCTD3-201ENST00000259154 DAPK1P53355 1430 aa19.39■□□□□ 0.69
KCTD3-201ENST00000259154 TCOF1Q13428 1488 aaKnown RBP19.38■□□□□ 0.69
KCTD3-201ENST00000259154 TRIM44Q96DX7 344 aaPredicted RBP19.38■□□□□ 0.69
KCTD3-201ENST00000259154 ADCY10Q96PN6 1610 aa19.38■□□□□ 0.69
KCTD3-201ENST00000259154 PKD2Q13563 968 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms