RNA–Protein interactions for RNA: ENST00000258613.4

THSD1-201, Transcript of thrombospondin type 1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THSD1, Length 2,962 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD1-201ENST00000258613 KIF14Q15058 1648 aa18.78■□□□□ 0.6
THSD1-201ENST00000258613 DENND4BO75064 1496 aaPredicted RBP18.78■□□□□ 0.6
THSD1-201ENST00000258613 MPHOSPH9Q99550 1183 aa18.78■□□□□ 0.6
THSD1-201ENST00000258613 ABCC5O15440 1437 aa18.77■□□□□ 0.6
THSD1-201ENST00000258613 DAPK1P53355 1430 aa18.76■□□□□ 0.59
THSD1-201ENST00000258613 TROQ12816 1431 aaPredicted RBP18.76■□□□□ 0.59
THSD1-201ENST00000258613 PLEKHD1A6NEE1 506 aa18.74■□□□□ 0.59
THSD1-201ENST00000258613 GPATCH8Q9UKJ3 1502 aaKnown RBP18.71■□□□□ 0.59
THSD1-201ENST00000258613 ATP10BO94823 1461 aa18.71■□□□□ 0.59
THSD1-201ENST00000258613 TIMELESSQ9UNS1 1208 aa18.7■□□□□ 0.58
THSD1-201ENST00000258613 PTPRGP23470 1445 aa18.69■□□□□ 0.58
THSD1-201ENST00000258613 SLC4A1APQ9BWU0 796 aaKnown RBP18.69■□□□□ 0.58
THSD1-201ENST00000258613 GCC2Q8IWJ2 1684 aa18.68■□□□□ 0.58
THSD1-201ENST00000258613 CAMSAP2Q08AD1 1489 aa18.68■□□□□ 0.58
THSD1-201ENST00000258613 CHD1O14646 1710 aa18.68■□□□□ 0.58
THSD1-201ENST00000258613 HNRNPMP52272 730 aaKnown RBP eCLIP18.66■□□□□ 0.58
THSD1-201ENST00000258613 L3MBTL2Q969R5 705 aa18.66■□□□□ 0.58
THSD1-201ENST00000258613 DNMT1P26358 1616 aaKnown RBP18.65■□□□□ 0.58
THSD1-201ENST00000258613 ERCC6L2Q5T890 1561 aa18.65■□□□□ 0.58
THSD1-201ENST00000258613 ABCA8O94911 1581 aa18.64■□□□□ 0.57
THSD1-201ENST00000258613 KDM5BQ9UGL1 1544 aa18.64■□□□□ 0.57
THSD1-201ENST00000258613 AKNAQ7Z591 1439 aa18.62■□□□□ 0.57
THSD1-201ENST00000258613 NCOA1Q15788 1441 aa18.6■□□□□ 0.57
THSD1-201ENST00000258613 ROCK1Q13464 1354 aa18.59■□□□□ 0.57
THSD1-201ENST00000258613 HSPA5P11021 654 aaKnown RBP18.57■□□□□ 0.56
THSD1-201ENST00000258613 NBPF8Q3BBV2 869 aa18.57■□□□□ 0.56
THSD1-201ENST00000258613 CDC42BPAQ5VT25 1732 aa18.57■□□□□ 0.56
THSD1-201ENST00000258613 ANKRD30BQ9BXX2 1392 aa18.56■□□□□ 0.56
THSD1-201ENST00000258613 ZNF326Q5BKZ1 582 aaKnown RBP18.56■□□□□ 0.56
THSD1-201ENST00000258613 ABCC10Q5T3U5 1492 aa18.55■□□□□ 0.56
THSD1-201ENST00000258613 PKD2Q13563 968 aa18.55■□□□□ 0.56
THSD1-201ENST00000258613 ITSN2Q9NZM3 1697 aa18.53■□□□□ 0.56
THSD1-201ENST00000258613 ADCY10Q96PN6 1610 aa18.52■□□□□ 0.56
THSD1-201ENST00000258613 C11orf95C9JLR9 678 aaPredicted RBP18.51■□□□□ 0.55
THSD1-201ENST00000258613 TSPY4P0CV99 314 aa18.51■□□□□ 0.55
THSD1-201ENST00000258613 TSPY10P0CW01 314 aa18.51■□□□□ 0.55
THSD1-201ENST00000258613 PZPP20742 1482 aa18.51■□□□□ 0.55
THSD1-201ENST00000258613 ANKRD30AQ9BXX3 1397 aa18.5■□□□□ 0.55
THSD1-201ENST00000258613 ANKRD50Q9ULJ7 1429 aa18.49■□□□□ 0.55
THSD1-201ENST00000258613 WASHC2AQ641Q2 1341 aa18.49■□□□□ 0.55
THSD1-201ENST00000258613 C9orf84Q5VXU9 1444 aa18.48■□□□□ 0.55
THSD1-201ENST00000258613 NUP155O75694 1391 aa18.48■□□□□ 0.55
THSD1-201ENST00000258613 ANP32CO43423 234 aa18.47■□□□□ 0.55
THSD1-201ENST00000258613 CNGB1Q14028 1251 aaPredicted RBP18.46■□□□□ 0.55
THSD1-201ENST00000258613 EIF4G2P78344 907 aaKnown RBP eCLIP18.46■□□□□ 0.55
THSD1-201ENST00000258613 RPRD2Q5VT52 1461 aaKnown RBP18.45■□□□□ 0.54
THSD1-201ENST00000258613 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.45■□□□□ 0.54
THSD1-201ENST00000258613 CROCC2H7BZ55 1655 aa18.44■□□□□ 0.54
THSD1-201ENST00000258613 KIF15Q9NS87 1388 aa18.43■□□□□ 0.54
THSD1-201ENST00000258613 CDC42BPBQ9Y5S2 1711 aa18.43■□□□□ 0.54
THSD1-201ENST00000258613 ADGBQ8N7X0 1667 aa18.43■□□□□ 0.54
THSD1-201ENST00000258613 KDM2AQ9Y2K7 1162 aa18.42■□□□□ 0.54
THSD1-201ENST00000258613 TEX14Q8IWB6 1497 aa18.42■□□□□ 0.54
THSD1-201ENST00000258613 MBD5Q9P267 1494 aa18.42■□□□□ 0.54
THSD1-201ENST00000258613 TTC37Q6PGP7 1564 aa18.42■□□□□ 0.54
THSD1-201ENST00000258613 ADGRL2O95490 1459 aa18.41■□□□□ 0.54
THSD1-201ENST00000258613 POLR3GLQ9BT43 218 aa18.41■□□□□ 0.54
THSD1-201ENST00000258613 SAMD9LQ8IVG5 1584 aa18.41■□□□□ 0.54
THSD1-201ENST00000258613 SHROOM2Q13796 1616 aa18.4■□□□□ 0.54
THSD1-201ENST00000258613 KIAA1107Q9UPP5 1409 aa18.39■□□□□ 0.53
THSD1-201ENST00000258613 ARHGAP5Q13017 1502 aa18.38■□□□□ 0.53
THSD1-201ENST00000258613 PRKCSHP14314 528 aaPredicted RBP18.38■□□□□ 0.53
THSD1-201ENST00000258613 BCL11AQ9H165 835 aa18.38■□□□□ 0.53
THSD1-201ENST00000258613 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.37■□□□□ 0.53
THSD1-201ENST00000258613 SYCP2Q9BX26 1530 aa18.37■□□□□ 0.53
THSD1-201ENST00000258613 CCDC184Q52MB2 194 aa18.36■□□□□ 0.53
THSD1-201ENST00000258613 ABCC2Q92887 1545 aa18.35■□□□□ 0.53
THSD1-201ENST00000258613 RGL3Q3MIN7 710 aa18.33■□□□□ 0.53
THSD1-201ENST00000258613 PREX2Q70Z35 1606 aa18.33■□□□□ 0.52
THSD1-201ENST00000258613 CCDC141Q6ZP82 1450 aa18.32■□□□□ 0.52
THSD1-201ENST00000258613 ARHGEF12Q9NZN5 1544 aa18.31■□□□□ 0.52
THSD1-201ENST00000258613 DCAF11Q8TEB1 546 aa18.31■□□□□ 0.52
THSD1-201ENST00000258613 AFAP1Q8N556 730 aa18.3■□□□□ 0.52
THSD1-201ENST00000258613 CLASP1Q7Z460 1538 aa18.3■□□□□ 0.52
THSD1-201ENST00000258613 SHANK2Q9UPX8 1470 aa18.3■□□□□ 0.52
THSD1-201ENST00000258613 KIF7Q2M1P5 1343 aa18.29■□□□□ 0.52
THSD1-201ENST00000258613 CCDC7Q96M83 1385 aa18.29■□□□□ 0.52
THSD1-201ENST00000258613 CCER2I3L3R5 266 aa18.28■□□□□ 0.52
THSD1-201ENST00000258613 SUPT16HQ9Y5B9 1047 aaKnown RBP18.28■□□□□ 0.52
THSD1-201ENST00000258613 ZCCHC11Q5TAX3 1644 aaKnown RBP18.28■□□□□ 0.52
THSD1-201ENST00000258613 BCANQ96GW7 911 aa18.27■□□□□ 0.52
THSD1-201ENST00000258613 PLEKHH2Q8IVE3 1493 aa18.26■□□□□ 0.51
THSD1-201ENST00000258613 ARHGEF5Q12774 1597 aa18.26■□□□□ 0.51
THSD1-201ENST00000258613 SPATA31E1Q6ZUB1 1445 aa18.25■□□□□ 0.51
THSD1-201ENST00000258613 SENP3-EIF4A1A0A087X0R7 540 aa18.24■□□□□ 0.51
THSD1-201ENST00000258613 TRAPPC8Q9Y2L5 1435 aa18.24■□□□□ 0.51
THSD1-201ENST00000258613 EFCAB2Q5VUJ9 269 aa18.24■□□□□ 0.51
THSD1-201ENST00000258613 USP47Q96K76 1375 aa18.23■□□□□ 0.51
THSD1-201ENST00000258613 MYO5CQ9NQX4 1742 aa18.23■□□□□ 0.51
THSD1-201ENST00000258613 CARD11Q9BXL7 1154 aa18.23■□□□□ 0.51
THSD1-201ENST00000258613 RSPH4AQ5TD94 716 aa18.22■□□□□ 0.51
THSD1-201ENST00000258613 MYT1LQ9UL68 1186 aa18.22■□□□□ 0.51
THSD1-201ENST00000258613 FAM135AQ9P2D6 1515 aa18.22■□□□□ 0.51
THSD1-201ENST00000258613 HNRNPUQ00839 825 aaKnown RBP eCLIP18.21■□□□□ 0.51
THSD1-201ENST00000258613 PLCH2O75038 1416 aa18.21■□□□□ 0.51
THSD1-201ENST00000258613 CNTLNQ9NXG0 1405 aa18.2■□□□□ 0.5
THSD1-201ENST00000258613 FAM9BQ8IZU0 186 aa18.2■□□□□ 0.5
THSD1-201ENST00000258613 PRKRIP1Q9H875 184 aaPredicted RBP18.19■□□□□ 0.5
THSD1-201ENST00000258613 ST20-MTHFSA0A0A6YYL1 179 aa18.18■□□□□ 0.5
THSD1-201ENST00000258613 NBPF1Q3BBV0 1214 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms