RNA–Protein interactions for RNA: ENST00000252211.6

ZKSCAN3-201, Transcript of zinc finger with KRAB and SCAN domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZKSCAN3, Length 4,725 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3-201ENST00000252211 MRC2Q9UBG0 1479 aa16.08■□□□□ 0.16
ZKSCAN3-201ENST00000252211 FAM69CQ0P6D2 419 aa16.07■□□□□ 0.16
ZKSCAN3-201ENST00000252211 ARXQ96QS3 562 aa16.06■□□□□ 0.16
ZKSCAN3-201ENST00000252211 HMGXB3Q12766 1538 aa16.05■□□□□ 0.16
ZKSCAN3-201ENST00000252211 NEUROD2Q15784 382 aa16.05■□□□□ 0.16
ZKSCAN3-201ENST00000252211 CC2D1BQ5T0F9 858 aaKnown RBP16.05■□□□□ 0.16
ZKSCAN3-201ENST00000252211 U2SURPO15042 1029 aaKnown RBP16.05■□□□□ 0.16
ZKSCAN3-201ENST00000252211 SOX12O15370 315 aa16.04■□□□□ 0.16
ZKSCAN3-201ENST00000252211 HDGFL2Q7Z4V5 671 aaPredicted RBP16.03■□□□□ 0.16
ZKSCAN3-201ENST00000252211 HSP90AA1P07900 732 aaKnown RBP16.03■□□□□ 0.16
ZKSCAN3-201ENST00000252211 PNNQ9H307 717 aaKnown RBP16.02■□□□□ 0.16
ZKSCAN3-201ENST00000252211 IFT140Q96RY7 1462 aa16.01■□□□□ 0.15
ZKSCAN3-201ENST00000252211 MORC1Q86VD1 984 aa16.01■□□□□ 0.15
ZKSCAN3-201ENST00000252211 LAS1LQ9Y4W2 734 aaKnown RBP16■□□□□ 0.15
ZKSCAN3-201ENST00000252211 ROCK2O75116 1388 aaKnown RBP15.99■□□□□ 0.15
ZKSCAN3-201ENST00000252211 HSPA5P11021 654 aaKnown RBP15.97■□□□□ 0.15
ZKSCAN3-201ENST00000252211 PAK3O75914 559 aaPredicted RBP15.97■□□□□ 0.15
ZKSCAN3-201ENST00000252211 DNAJC5BQ9UF47 199 aa15.97■□□□□ 0.15
ZKSCAN3-201ENST00000252211 SENP3-EIF4A1A0A087X0R7 540 aa15.97■□□□□ 0.15
ZKSCAN3-201ENST00000252211 EIF3AQ14152 1382 aaKnown RBP15.95■□□□□ 0.14
ZKSCAN3-201ENST00000252211 NUTM2DQ5VT03 806 aaPredicted RBP15.95■□□□□ 0.14
ZKSCAN3-201ENST00000252211 TOPBP1Q92547 1522 aa15.94■□□□□ 0.14
ZKSCAN3-201ENST00000252211 L3MBTL2Q969R5 705 aa15.93■□□□□ 0.14
ZKSCAN3-201ENST00000252211 PRG4Q92954 1404 aaPredicted RBP15.93■□□□□ 0.14
ZKSCAN3-201ENST00000252211 FTSJ3Q8IY81 847 aaKnown RBP15.92■□□□□ 0.14
ZKSCAN3-201ENST00000252211 IRX6P78412 446 aaPredicted RBP15.91■□□□□ 0.14
ZKSCAN3-201ENST00000252211 CCDC144AA2RUR9 1427 aa15.9■□□□□ 0.14
ZKSCAN3-201ENST00000252211 VGFO15240 615 aaPredicted RBP15.9■□□□□ 0.14
ZKSCAN3-201ENST00000252211 TERF2IPQ9NYB0 399 aa15.9■□□□□ 0.14
ZKSCAN3-201ENST00000252211 NPHP1O15259 732 aa15.9■□□□□ 0.14
ZKSCAN3-201ENST00000252211 MYOM3Q5VTT5 1437 aa15.9■□□□□ 0.14
ZKSCAN3-201ENST00000252211 POLA1P09884 1462 aaPredicted RBP15.9■□□□□ 0.14
ZKSCAN3-201ENST00000252211 NGDNQ8NEJ9 315 aaKnown RBP15.89■□□□□ 0.13
ZKSCAN3-201ENST00000252211 CSB-PGBD3P0DP91 1061 aa15.89■□□□□ 0.13
ZKSCAN3-201ENST00000252211 BICRAQ9NZM4 1560 aa15.87■□□□□ 0.13
ZKSCAN3-201ENST00000252211 UACAQ9BZF9 1416 aa15.87■□□□□ 0.13
ZKSCAN3-201ENST00000252211 KTN1Q86UP2 1357 aaKnown RBP15.86■□□□□ 0.13
ZKSCAN3-201ENST00000252211 RTF1Q92541 710 aaKnown RBP15.86■□□□□ 0.13
ZKSCAN3-201ENST00000252211 SYNJ2O15056 1496 aa15.85■□□□□ 0.13
ZKSCAN3-201ENST00000252211 TRAK1Q9UPV9 953 aa15.85■□□□□ 0.13
ZKSCAN3-201ENST00000252211 CHMP4BQ9H444 224 aaKnown RBP15.84■□□□□ 0.13
ZKSCAN3-201ENST00000252211 MS4A1P11836 297 aa15.83■□□□□ 0.12
ZKSCAN3-201ENST00000252211 ZNF644Q9H582 1327 aaPredicted RBP15.83■□□□□ 0.12
ZKSCAN3-201ENST00000252211 SNAPC4Q5SXM2 1469 aa15.83■□□□□ 0.12
ZKSCAN3-201ENST00000252211 FRAT1Q92837 279 aaPredicted RBP15.83■□□□□ 0.12
ZKSCAN3-201ENST00000252211 KIF15Q9NS87 1388 aa15.82■□□□□ 0.12
ZKSCAN3-201ENST00000252211 NUTM2FA1L443 756 aa15.82■□□□□ 0.12
ZKSCAN3-201ENST00000252211 SYNJ1O43426 1573 aa15.81■□□□□ 0.12
ZKSCAN3-201ENST00000252211 U2AF1L5P0DN76 240 aaPredicted RBP15.81■□□□□ 0.12
ZKSCAN3-201ENST00000252211 U2AF1Q01081 240 aaKnown RBP eCLIP15.81■□□□□ 0.12
ZKSCAN3-201ENST00000252211 CASKIN1Q8WXD9 1431 aa15.81■□□□□ 0.12
ZKSCAN3-201ENST00000252211 DNMBPQ6XZF7 1577 aa15.8■□□□□ 0.12
ZKSCAN3-201ENST00000252211 CUX1P39880 1505 aa15.79■□□□□ 0.12
ZKSCAN3-201ENST00000252211 AFAP1Q8N556 730 aa15.79■□□□□ 0.12
ZKSCAN3-201ENST00000252211 LAMC3Q9Y6N6 1575 aa15.79■□□□□ 0.12
ZKSCAN3-201ENST00000252211 PRDM2Q13029 1718 aa15.79■□□□□ 0.12
ZKSCAN3-201ENST00000252211 FGD6Q6ZV73 1430 aa15.79■□□□□ 0.12
ZKSCAN3-201ENST00000252211 RALBP1Q15311 655 aa15.79■□□□□ 0.12
ZKSCAN3-201ENST00000252211 CCDC9Q9Y3X0 531 aaKnown RBP15.79■□□□□ 0.12
ZKSCAN3-201ENST00000252211 ERICH3Q5RHP9 1530 aa15.78■□□□□ 0.12
ZKSCAN3-201ENST00000252211 AEBP2Q6ZN18 517 aaPredicted RBP15.78■□□□□ 0.12
ZKSCAN3-201ENST00000252211 CCER2I3L3R5 266 aa15.76■□□□□ 0.11
ZKSCAN3-201ENST00000252211 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.76■□□□□ 0.11
ZKSCAN3-201ENST00000252211 SUPT16HQ9Y5B9 1047 aaKnown RBP15.76■□□□□ 0.11
ZKSCAN3-201ENST00000252211 TOP2BQ02880 1626 aa15.76■□□□□ 0.11
ZKSCAN3-201ENST00000252211 CALD1Q05682 793 aaKnown RBP15.76■□□□□ 0.11
ZKSCAN3-201ENST00000252211 AMPHP49418 695 aa15.74■□□□□ 0.11
ZKSCAN3-201ENST00000252211 KIF21BO75037 1637 aa15.74■□□□□ 0.11
ZKSCAN3-201ENST00000252211 OS9Q13438 667 aaPredicted RBP15.74■□□□□ 0.11
ZKSCAN3-201ENST00000252211 FYCO1Q9BQS8 1478 aa15.74■□□□□ 0.11
ZKSCAN3-201ENST00000252211 ST20-MTHFSA0A0A6YYL1 179 aa15.73■□□□□ 0.11
ZKSCAN3-201ENST00000252211 ARHGAP5Q13017 1502 aa15.73■□□□□ 0.11
ZKSCAN3-201ENST00000252211 LRRC9Q6ZRR7 1453 aa15.73■□□□□ 0.11
ZKSCAN3-201ENST00000252211 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.72■□□□□ 0.11
ZKSCAN3-201ENST00000252211 PRXQ9BXM0 1461 aa15.72■□□□□ 0.11
ZKSCAN3-201ENST00000252211 CHMP4AQ9BY43 222 aa15.72■□□□□ 0.11
ZKSCAN3-201ENST00000252211 ANKRD50Q9ULJ7 1429 aa15.72■□□□□ 0.11
ZKSCAN3-201ENST00000252211 NCOA2Q15596 1464 aa15.72■□□□□ 0.11
ZKSCAN3-201ENST00000252211 EVC2Q86UK5 1308 aa15.72■□□□□ 0.11
ZKSCAN3-201ENST00000252211 PHLDB1Q86UU1 1377 aa15.71■□□□□ 0.11
ZKSCAN3-201ENST00000252211 CASC1Q6TDU7 716 aa15.71■□□□□ 0.11
ZKSCAN3-201ENST00000252211 STAC3Q96MF2 364 aa15.71■□□□□ 0.11
ZKSCAN3-201ENST00000252211 EIF5BO60841 1220 aaKnown RBP15.7■□□□□ 0.1
ZKSCAN3-201ENST00000252211 ANP32BQ92688 251 aaKnown RBP15.7■□□□□ 0.1
ZKSCAN3-201ENST00000252211 KIAA0586Q9BVV6 1533 aa15.7■□□□□ 0.1
ZKSCAN3-201ENST00000252211 DHX57Q6P158 1386 aaKnown RBP15.7■□□□□ 0.1
ZKSCAN3-201ENST00000252211 EFCAB5A4FU69 1503 aa15.69■□□□□ 0.1
ZKSCAN3-201ENST00000252211 MINK1Q8N4C8 1332 aaPredicted RBP15.69■□□□□ 0.1
ZKSCAN3-201ENST00000252211 ABCA10Q8WWZ4 1543 aa15.68■□□□□ 0.1
ZKSCAN3-201ENST00000252211 ARAP1Q96P48 1450 aa15.67■□□□□ 0.1
ZKSCAN3-201ENST00000252211 GOLGA2Q08379 1002 aa15.67■□□□□ 0.1
ZKSCAN3-201ENST00000252211 NLRP13Q86W25 1043 aa15.67■□□□□ 0.1
ZKSCAN3-201ENST00000252211 LTV1Q96GA3 475 aaPredicted RBP15.67■□□□□ 0.1
ZKSCAN3-201ENST00000252211 TROQ12816 1431 aaPredicted RBP15.66■□□□□ 0.1
ZKSCAN3-201ENST00000252211 IPO8O15397 1037 aaKnown RBP15.65■□□□□ 0.1
ZKSCAN3-201ENST00000252211 ZNF330Q9Y3S2 320 aaPredicted RBP15.65■□□□□ 0.1
ZKSCAN3-201ENST00000252211 COG3Q96JB2 828 aa15.65■□□□□ 0.1
ZKSCAN3-201ENST00000252211 PLEKHH2Q8IVE3 1493 aa15.64■□□□□ 0.09
ZKSCAN3-201ENST00000252211 BECN1Q14457 450 aa15.63■□□□□ 0.09
ZKSCAN3-201ENST00000252211 CGNL1Q0VF96 1302 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms