RNA–Protein interactions for RNA: ENST00000252085.3

PCDHGA12-201, Transcript of protocadherin gamma subfamily A, 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA12, Length 4,747 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12-201ENST00000252085 FGD5Q6ZNL6 1462 aa16.52■□□□□ 0.23
PCDHGA12-201ENST00000252085 LAS1LQ9Y4W2 734 aaKnown RBP16.51■□□□□ 0.23
PCDHGA12-201ENST00000252085 RGS3P49796 1198 aa16.51■□□□□ 0.23
PCDHGA12-201ENST00000252085 BECN1Q14457 450 aa16.51■□□□□ 0.23
PCDHGA12-201ENST00000252085 KTN1Q86UP2 1357 aaKnown RBP16.5■□□□□ 0.23
PCDHGA12-201ENST00000252085 SAFB2Q14151 953 aaKnown RBP eCLIP16.49■□□□□ 0.23
PCDHGA12-201ENST00000252085 MLECQ14165 292 aa16.48■□□□□ 0.23
PCDHGA12-201ENST00000252085 NCAPD3P42695 1498 aa16.48■□□□□ 0.23
PCDHGA12-201ENST00000252085 SRPK2P78362 688 aaKnown RBP16.47■□□□□ 0.23
PCDHGA12-201ENST00000252085 MORC1Q86VD1 984 aa16.47■□□□□ 0.23
PCDHGA12-201ENST00000252085 RSPH4AQ5TD94 716 aa16.47■□□□□ 0.23
PCDHGA12-201ENST00000252085 NAP1L5Q96NT1 182 aaPredicted RBP16.46■□□□□ 0.23
PCDHGA12-201ENST00000252085 RAD54L2Q9Y4B4 1467 aa16.46■□□□□ 0.23
PCDHGA12-201ENST00000252085 KIF3BO15066 747 aa16.45■□□□□ 0.22
PCDHGA12-201ENST00000252085 RALBP1Q15311 655 aa16.45■□□□□ 0.22
PCDHGA12-201ENST00000252085 KIF21BO75037 1637 aa16.43■□□□□ 0.22
PCDHGA12-201ENST00000252085 STK26Q9P289 416 aa16.43■□□□□ 0.22
PCDHGA12-201ENST00000252085 GAPVD1Q14C86 1478 aa16.42■□□□□ 0.22
PCDHGA12-201ENST00000252085 SPAG9O60271 1321 aaKnown RBP16.42■□□□□ 0.22
PCDHGA12-201ENST00000252085 TRIM44Q96DX7 344 aaPredicted RBP16.41■□□□□ 0.22
PCDHGA12-201ENST00000252085 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.4■□□□□ 0.22
PCDHGA12-201ENST00000252085 CDK11BP21127 795 aaKnown RBP16.39■□□□□ 0.21
PCDHGA12-201ENST00000252085 A0A0G2JS52 829 aa16.39■□□□□ 0.21
PCDHGA12-201ENST00000252085 MS4A1P11836 297 aa16.39■□□□□ 0.21
PCDHGA12-201ENST00000252085 PNNQ9H307 717 aaKnown RBP16.38■□□□□ 0.21
PCDHGA12-201ENST00000252085 RBM19Q9Y4C8 960 aaKnown RBP16.38■□□□□ 0.21
PCDHGA12-201ENST00000252085 RCAN3Q9UKA8 241 aa16.38■□□□□ 0.21
PCDHGA12-201ENST00000252085 NOP58Q9Y2X3 529 aaKnown RBP16.37■□□□□ 0.21
PCDHGA12-201ENST00000252085 PHLDB1Q86UU1 1377 aa16.37■□□□□ 0.21
PCDHGA12-201ENST00000252085 LMOD2Q6P5Q4 547 aa16.37■□□□□ 0.21
PCDHGA12-201ENST00000252085 HDGFP51858 240 aaKnown RBP16.37■□□□□ 0.21
PCDHGA12-201ENST00000252085 ST20-MTHFSA0A0A6YYL1 179 aa16.36■□□□□ 0.21
PCDHGA12-201ENST00000252085 PTPRGP23470 1445 aa16.36■□□□□ 0.21
PCDHGA12-201ENST00000252085 NLRP13Q86W25 1043 aa16.35■□□□□ 0.21
PCDHGA12-201ENST00000252085 SOX12O15370 315 aa16.34■□□□□ 0.21
PCDHGA12-201ENST00000252085 FGD6Q6ZV73 1430 aa16.34■□□□□ 0.21
PCDHGA12-201ENST00000252085 SYNJ1O43426 1573 aa16.34■□□□□ 0.21
PCDHGA12-201ENST00000252085 CHMP4BQ9H444 224 aaKnown RBP16.33■□□□□ 0.2
PCDHGA12-201ENST00000252085 U2AF1L5P0DN76 240 aaPredicted RBP16.32■□□□□ 0.2
PCDHGA12-201ENST00000252085 PRKCSHP14314 528 aaPredicted RBP16.32■□□□□ 0.2
PCDHGA12-201ENST00000252085 U2AF1Q01081 240 aaKnown RBP eCLIP16.32■□□□□ 0.2
PCDHGA12-201ENST00000252085 HDGFL2Q7Z4V5 671 aaPredicted RBP16.32■□□□□ 0.2
PCDHGA12-201ENST00000252085 LRRC9Q6ZRR7 1453 aa16.32■□□□□ 0.2
PCDHGA12-201ENST00000252085 HAP1P54257 671 aaPredicted RBP16.31■□□□□ 0.2
PCDHGA12-201ENST00000252085 ARAP1Q96P48 1450 aa16.31■□□□□ 0.2
PCDHGA12-201ENST00000252085 CCDC144AA2RUR9 1427 aa16.31■□□□□ 0.2
PCDHGA12-201ENST00000252085 CFTRP13569 1480 aa16.3■□□□□ 0.2
PCDHGA12-201ENST00000252085 MYOM3Q5VTT5 1437 aa16.3■□□□□ 0.2
PCDHGA12-201ENST00000252085 EIF3AQ14152 1382 aaKnown RBP16.3■□□□□ 0.2
PCDHGA12-201ENST00000252085 ZNF644Q9H582 1327 aaPredicted RBP16.3■□□□□ 0.2
PCDHGA12-201ENST00000252085 PRKRIP1Q9H875 184 aaPredicted RBP16.3■□□□□ 0.2
PCDHGA12-201ENST00000252085 GOLGA6L22H0YM25 854 aa16.3■□□□□ 0.2
PCDHGA12-201ENST00000252085 NCLP19338 710 aaKnown RBP16.3■□□□□ 0.2
PCDHGA12-201ENST00000252085 CASC1Q6TDU7 716 aa16.3■□□□□ 0.2
PCDHGA12-201ENST00000252085 WASHC2CQ9Y4E1 1318 aa16.28■□□□□ 0.2
PCDHGA12-201ENST00000252085 AQRO60306 1485 aaKnown RBP eCLIP16.28■□□□□ 0.2
PCDHGA12-201ENST00000252085 ERICH3Q5RHP9 1530 aa16.27■□□□□ 0.2
PCDHGA12-201ENST00000252085 NUTM2DQ5VT03 806 aaPredicted RBP16.27■□□□□ 0.2
PCDHGA12-201ENST00000252085 TSHZ2Q9NRE2 1034 aa16.26■□□□□ 0.19
PCDHGA12-201ENST00000252085 KIF15Q9NS87 1388 aa16.26■□□□□ 0.19
PCDHGA12-201ENST00000252085 USP47Q96K76 1375 aa16.26■□□□□ 0.19
PCDHGA12-201ENST00000252085 CASKIN1Q8WXD9 1431 aa16.26■□□□□ 0.19
PCDHGA12-201ENST00000252085 TRHP20396 242 aaPredicted RBP16.25■□□□□ 0.19
PCDHGA12-201ENST00000252085 PANK3Q9H999 370 aa16.25■□□□□ 0.19
PCDHGA12-201ENST00000252085 GOLGA2Q08379 1002 aa16.24■□□□□ 0.19
PCDHGA12-201ENST00000252085 MYBBP1AQ9BQG0 1328 aaKnown RBP16.24■□□□□ 0.19
PCDHGA12-201ENST00000252085 PRXQ9BXM0 1461 aa16.24■□□□□ 0.19
PCDHGA12-201ENST00000252085 UACAQ9BZF9 1416 aa16.24■□□□□ 0.19
PCDHGA12-201ENST00000252085 PDE3BQ13370 1112 aa16.24■□□□□ 0.19
PCDHGA12-201ENST00000252085 TRAK1Q9UPV9 953 aa16.24■□□□□ 0.19
PCDHGA12-201ENST00000252085 CCDC146Q8IYE0 955 aa16.23■□□□□ 0.19
PCDHGA12-201ENST00000252085 CUX1P39880 1505 aa16.21■□□□□ 0.19
PCDHGA12-201ENST00000252085 NCOA2Q15596 1464 aa16.21■□□□□ 0.19
PCDHGA12-201ENST00000252085 TCERG1O14776 1098 aaKnown RBP16.2■□□□□ 0.18
PCDHGA12-201ENST00000252085 IPO8O15397 1037 aaKnown RBP16.2■□□□□ 0.18
PCDHGA12-201ENST00000252085 TERF2IPQ9NYB0 399 aa16.2■□□□□ 0.18
PCDHGA12-201ENST00000252085 RRBP1Q9P2E9 1410 aaKnown RBP16.2■□□□□ 0.18
PCDHGA12-201ENST00000252085 RTF1Q92541 710 aaKnown RBP16.18■□□□□ 0.18
PCDHGA12-201ENST00000252085 HSP90AB1P08238 724 aaKnown RBP16.18■□□□□ 0.18
PCDHGA12-201ENST00000252085 OS9Q13438 667 aaPredicted RBP16.18■□□□□ 0.18
PCDHGA12-201ENST00000252085 NESP48681 1621 aa16.17■□□□□ 0.18
PCDHGA12-201ENST00000252085 TOP2BQ02880 1626 aa16.17■□□□□ 0.18
PCDHGA12-201ENST00000252085 FYCO1Q9BQS8 1478 aa16.17■□□□□ 0.18
PCDHGA12-201ENST00000252085 ZBED9Q6R2W3 1325 aa16.16■□□□□ 0.18
PCDHGA12-201ENST00000252085 CALD1Q05682 793 aaKnown RBP16.15■□□□□ 0.18
PCDHGA12-201ENST00000252085 ITPRIPQ8IWB1 547 aa16.15■□□□□ 0.18
PCDHGA12-201ENST00000252085 RWDD1Q9H446 243 aaPredicted RBP16.15■□□□□ 0.18
PCDHGA12-201ENST00000252085 GRIN2BQ13224 1484 aa16.14■□□□□ 0.17
PCDHGA12-201ENST00000252085 VSIG10Q8N0Z9 540 aa16.14■□□□□ 0.17
PCDHGA12-201ENST00000252085 CLUAP1Q96AJ1 413 aa16.14■□□□□ 0.17
PCDHGA12-201ENST00000252085 CCDC7Q96M83 1385 aa16.13■□□□□ 0.17
PCDHGA12-201ENST00000252085 ANKRD50Q9ULJ7 1429 aa16.13■□□□□ 0.17
PCDHGA12-201ENST00000252085 KIF7Q2M1P5 1343 aa16.13■□□□□ 0.17
PCDHGA12-201ENST00000252085 HSCBQ8IWL3 235 aa16.13■□□□□ 0.17
PCDHGA12-201ENST00000252085 TPRNQ4KMQ1 711 aa16.13■□□□□ 0.17
PCDHGA12-201ENST00000252085 AMER1Q5JTC6 1135 aaPredicted RBP16.13■□□□□ 0.17
PCDHGA12-201ENST00000252085 SMC4Q9NTJ3 1288 aa16.13■□□□□ 0.17
PCDHGA12-201ENST00000252085 HMGXB3Q12766 1538 aa16.13■□□□□ 0.17
PCDHGA12-201ENST00000252085 CENPJQ9HC77 1338 aaPredicted RBP16.12■□□□□ 0.17
PCDHGA12-201ENST00000252085 PAK3O75914 559 aaPredicted RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms