RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 ST20-MTHFSA0A0A6YYL1 179 aa15.39■□□□□ 0.05
SOX9-201ENST00000245479 NCOA2Q15596 1464 aa15.39■□□□□ 0.05
SOX9-201ENST00000245479 TIAM1Q13009 1591 aa15.38■□□□□ 0.05
SOX9-201ENST00000245479 FANCIQ9NVI1 1328 aa15.37■□□□□ 0.05
SOX9-201ENST00000245479 PRKRIP1Q9H875 184 aaPredicted RBP15.37■□□□□ 0.05
SOX9-201ENST00000245479 PCF11O94913 1555 aaKnown RBP15.36■□□□□ 0.05
SOX9-201ENST00000245479 NEUROD2Q15784 382 aa15.36■□□□□ 0.05
SOX9-201ENST00000245479 GLIPR1L2Q4G1C9 344 aa15.35■□□□□ 0.05
SOX9-201ENST00000245479 CDK13Q14004 1512 aaKnown RBP15.34■□□□□ 0.05
SOX9-201ENST00000245479 NUTM2DQ5VT03 806 aaPredicted RBP15.34■□□□□ 0.05
SOX9-201ENST00000245479 TIMELESSQ9UNS1 1208 aa15.33■□□□□ 0.05
SOX9-201ENST00000245479 HMGXB3Q12766 1538 aa15.33■□□□□ 0.04
SOX9-201ENST00000245479 MAPKBP1O60336 1514 aa15.33■□□□□ 0.04
SOX9-201ENST00000245479 MYOM3Q5VTT5 1437 aa15.32■□□□□ 0.04
SOX9-201ENST00000245479 CASKIN1Q8WXD9 1431 aa15.32■□□□□ 0.04
SOX9-201ENST00000245479 KIF7Q2M1P5 1343 aa15.31■□□□□ 0.04
SOX9-201ENST00000245479 PLIN1O60240 522 aa15.3■□□□□ 0.04
SOX9-201ENST00000245479 SAFB2Q14151 953 aaKnown RBP eCLIP15.3■□□□□ 0.04
SOX9-201ENST00000245479 ARXQ96QS3 562 aa15.3■□□□□ 0.04
SOX9-201ENST00000245479 PRG4Q92954 1404 aaPredicted RBP15.29■□□□□ 0.04
SOX9-201ENST00000245479 ANO8Q9HCE9 1232 aaPredicted RBP15.28■□□□□ 0.04
SOX9-201ENST00000245479 NAIPQ13075 1403 aa15.28■□□□□ 0.04
SOX9-201ENST00000245479 PPM1GO15355 546 aaPredicted RBP15.28■□□□□ 0.04
SOX9-201ENST00000245479 UACAQ9BZF9 1416 aa15.27■□□□□ 0.04
SOX9-201ENST00000245479 URB2Q14146 1524 aaKnown RBP15.27■□□□□ 0.03
SOX9-201ENST00000245479 BIVM-ERCC5R4GMW8 1640 aa15.27■□□□□ 0.03
SOX9-201ENST00000245479 NBPF1Q3BBV0 1214 aa15.26■□□□□ 0.03
SOX9-201ENST00000245479 ERICH6BQ5W0A0 696 aa15.26■□□□□ 0.03
SOX9-201ENST00000245479 SKAP1Q86WV1 359 aa15.26■□□□□ 0.03
SOX9-201ENST00000245479 MSH5O43196 834 aa15.25■□□□□ 0.03
SOX9-201ENST00000245479 ZNF608Q9ULD9 1512 aaPredicted RBP15.24■□□□□ 0.03
SOX9-201ENST00000245479 IPO9Q96P70 1041 aaKnown RBP15.23■□□□□ 0.03
SOX9-201ENST00000245479 PRDM2Q13029 1718 aa15.21■□□□□ 0.03
SOX9-201ENST00000245479 CANXP27824 592 aaKnown RBP15.21■□□□□ 0.03
SOX9-201ENST00000245479 CCDC146Q8IYE0 955 aa15.21■□□□□ 0.02
SOX9-201ENST00000245479 DDRGK1Q96HY6 314 aa15.2■□□□□ 0.02
SOX9-201ENST00000245479 PLEKHG5O94827 1062 aa15.2■□□□□ 0.02
SOX9-201ENST00000245479 FYCO1Q9BQS8 1478 aa15.2■□□□□ 0.02
SOX9-201ENST00000245479 CCDC7Q96M83 1385 aa15.19■□□□□ 0.02
SOX9-201ENST00000245479 USP47Q96K76 1375 aa15.19■□□□□ 0.02
SOX9-201ENST00000245479 ROCK2O75116 1388 aaKnown RBP15.19■□□□□ 0.02
SOX9-201ENST00000245479 CDCA7LQ96GN5 454 aa15.19■□□□□ 0.02
SOX9-201ENST00000245479 HFM1A2PYH4 1435 aa15.18■□□□□ 0.02
SOX9-201ENST00000245479 WDR43Q15061 677 aaKnown RBP eCLIP15.18■□□□□ 0.02
SOX9-201ENST00000245479 GGT6Q6P531 493 aa15.18■□□□□ 0.02
SOX9-201ENST00000245479 ABCA10Q8WWZ4 1543 aa15.18■□□□□ 0.02
SOX9-201ENST00000245479 RGS3P49796 1198 aa15.17■□□□□ 0.02
SOX9-201ENST00000245479 PLB1Q6P1J6 1458 aa15.15■□□□□ 0.02
SOX9-201ENST00000245479 PANK3Q9H999 370 aa15.15■□□□□ 0.02
SOX9-201ENST00000245479 AFAP1Q8N556 730 aa15.15■□□□□ 0.02
SOX9-201ENST00000245479 AKNAQ7Z591 1439 aa15.14■□□□□ 0.01
SOX9-201ENST00000245479 EXOC6Q8TAG9 804 aa15.14■□□□□ 0.01
SOX9-201ENST00000245479 KNSTRNQ9Y448 316 aa15.14■□□□□ 0.01
SOX9-201ENST00000245479 ANKRD30AQ9BXX3 1397 aa15.14■□□□□ 0.01
SOX9-201ENST00000245479 DNMBPQ6XZF7 1577 aa15.14■□□□□ 0.01
SOX9-201ENST00000245479 KIF3BO15066 747 aa15.12■□□□□ 0.01
SOX9-201ENST00000245479 STK26Q9P289 416 aa15.11■□□□□ 0.01
SOX9-201ENST00000245479 EPRSP07814 1512 aaKnown RBP15.1■□□□□ 0.01
SOX9-201ENST00000245479 FRAT1Q92837 279 aaPredicted RBP15.1■□□□□ 0.01
SOX9-201ENST00000245479 IL27Q8NEV9 243 aa15.1■□□□□ 0.01
SOX9-201ENST00000245479 PAK3O75914 559 aaPredicted RBP15.1■□□□□ 0.01
SOX9-201ENST00000245479 SLC4A3P48751 1232 aa15.1■□□□□ 0.01
SOX9-201ENST00000245479 RRP7AQ9Y3A4 280 aaKnown RBP15.09■□□□□ 0.01
SOX9-201ENST00000245479 SNAPC4Q5SXM2 1469 aa15.08■□□□□ 0
SOX9-201ENST00000245479 CARMIL2Q6F5E8 1435 aa15.07■□□□□ 0
SOX9-201ENST00000245479 MLECQ14165 292 aa15.07■□□□□ 0
SOX9-201ENST00000245479 NUDCQ9Y266 331 aa15.07■□□□□ 0
SOX9-201ENST00000245479 RCAN3Q9UKA8 241 aa15.07■□□□□ 0
SOX9-201ENST00000245479 NAP1L5Q96NT1 182 aaPredicted RBP15.06■□□□□ 0
SOX9-201ENST00000245479 PTPRGP23470 1445 aa15.06■□□□□ 0
SOX9-201ENST00000245479 ANKRD50Q9ULJ7 1429 aa15.06■□□□□ 0
SOX9-201ENST00000245479 SLC24A1O60721 1099 aa15.06■□□□□ 0
SOX9-201ENST00000245479 THOC2Q8NI27 1593 aaKnown RBP15.06■□□□□ 0
SOX9-201ENST00000245479 KIF15Q9NS87 1388 aa15.05■□□□□ 0
SOX9-201ENST00000245479 NPM1P06748 294 aaKnown RBP eCLIP15.05■□□□□ 0
SOX9-201ENST00000245479 STAG3Q9UJ98 1225 aa15.05■□□□□ 0
SOX9-201ENST00000245479 CNTLNQ9NXG0 1405 aa15.05■□□□□ -0
SOX9-201ENST00000245479 TRAK1Q9UPV9 953 aa15.05■□□□□ -0
SOX9-201ENST00000245479 BCL2L13Q9BXK5 485 aa15.04■□□□□ -0
SOX9-201ENST00000245479 UPF2Q9HAU5 1272 aaKnown RBP15.04■□□□□ -0
SOX9-201ENST00000245479 ABCC5O15440 1437 aa15.04■□□□□ -0
SOX9-201ENST00000245479 TMF1P82094 1093 aa15.04■□□□□ -0
SOX9-201ENST00000245479 DAPK1P53355 1430 aa15.04■□□□□ -0
SOX9-201ENST00000245479 GRIN2BQ13224 1484 aa15.03■□□□□ -0
SOX9-201ENST00000245479 ANKRD30BQ9BXX2 1392 aa15.03■□□□□ -0
SOX9-201ENST00000245479 ZBED9Q6R2W3 1325 aa15.03■□□□□ -0
SOX9-201ENST00000245479 CLUAP1Q96AJ1 413 aa15.01□□□□□ -0.01
SOX9-201ENST00000245479 PTPN23Q9H3S7 1636 aa15□□□□□ -0.01
SOX9-201ENST00000245479 SOX12O15370 315 aa15□□□□□ -0.01
SOX9-201ENST00000245479 TMEM132EQ6IEE7 984 aa15□□□□□ -0.01
SOX9-201ENST00000245479 USP35Q9P2H5 1018 aa15□□□□□ -0.01
SOX9-201ENST00000245479 TCERG1O14776 1098 aaKnown RBP15□□□□□ -0.01
SOX9-201ENST00000245479 ARHGEF11O15085 1522 aa15□□□□□ -0.01
SOX9-201ENST00000245479 MAGI3Q5TCQ9 1506 aa14.99□□□□□ -0.01
SOX9-201ENST00000245479 EFCAB5A4FU69 1503 aa14.99□□□□□ -0.01
SOX9-201ENST00000245479 PNISRQ8TF01 805 aaKnown RBP14.98□□□□□ -0.01
SOX9-201ENST00000245479 KTN1Q86UP2 1357 aaKnown RBP14.98□□□□□ -0.01
SOX9-201ENST00000245479 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.98□□□□□ -0.01
SOX9-201ENST00000245479 ADAMTS8Q9UP79 889 aa14.98□□□□□ -0.01
SOX9-201ENST00000245479 EFCAB2Q5VUJ9 269 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms